RNA–Protein interactions for RNA: ENST00000591416.5

MBD1-224, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene MBD1, Length 4,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-224ENST00000591416 LRRC9Q6ZRR7 1453 aa20.75■□□□□ 0.91
MBD1-224ENST00000591416 MYOM3Q5VTT5 1437 aa20.75■□□□□ 0.91
MBD1-224ENST00000591416 HSPA5P11021 654 aaKnown RBP20.75■□□□□ 0.91
MBD1-224ENST00000591416 PRG4Q92954 1404 aaPredicted RBP20.74■□□□□ 0.91
MBD1-224ENST00000591416 WASHC2CQ9Y4E1 1318 aa20.74■□□□□ 0.91
MBD1-224ENST00000591416 FGD6Q6ZV73 1430 aa20.74■□□□□ 0.91
MBD1-224ENST00000591416 EFCAB5A4FU69 1503 aa20.74■□□□□ 0.91
MBD1-224ENST00000591416 L3MBTL2Q969R5 705 aa20.72■□□□□ 0.91
MBD1-224ENST00000591416 FYCO1Q9BQS8 1478 aa20.71■□□□□ 0.91
MBD1-224ENST00000591416 PRDM2Q13029 1718 aa20.71■□□□□ 0.91
MBD1-224ENST00000591416 DHX57Q6P158 1386 aaKnown RBP20.7■□□□□ 0.9
MBD1-224ENST00000591416 PHLDB1Q86UU1 1377 aa20.7■□□□□ 0.9
MBD1-224ENST00000591416 ZBTB7CA1YPR0 619 aa20.68■□□□□ 0.9
MBD1-224ENST00000591416 PLEKHG5O94827 1062 aa20.68■□□□□ 0.9
MBD1-224ENST00000591416 ROCK2O75116 1388 aaKnown RBP20.67■□□□□ 0.9
MBD1-224ENST00000591416 PPM1GO15355 546 aaPredicted RBP20.67■□□□□ 0.9
MBD1-224ENST00000591416 SYNJ2O15056 1496 aa20.67■□□□□ 0.9
MBD1-224ENST00000591416 NCOA2Q15596 1464 aa20.65■□□□□ 0.9
MBD1-224ENST00000591416 ZNF644Q9H582 1327 aaPredicted RBP20.65■□□□□ 0.9
MBD1-224ENST00000591416 RTL5Q5HYW3 569 aaPredicted RBP20.65■□□□□ 0.9
MBD1-224ENST00000591416 SRPK2P78362 688 aaKnown RBP20.65■□□□□ 0.9
MBD1-224ENST00000591416 CC2D1BQ5T0F9 858 aaKnown RBP20.64■□□□□ 0.89
MBD1-224ENST00000591416 NUDCQ9Y266 331 aa20.63■□□□□ 0.89
MBD1-224ENST00000591416 CCDC136Q96JN2 1154 aa20.63■□□□□ 0.89
MBD1-224ENST00000591416 SAFB2Q14151 953 aaKnown RBP eCLIP20.63■□□□□ 0.89
MBD1-224ENST00000591416 KIAA0586Q9BVV6 1533 aa20.62■□□□□ 0.89
MBD1-224ENST00000591416 STK26Q9P289 416 aa20.62■□□□□ 0.89
MBD1-224ENST00000591416 CCDC144AA2RUR9 1427 aa20.6■□□□□ 0.89
MBD1-224ENST00000591416 URB2Q14146 1524 aaKnown RBP20.6■□□□□ 0.89
MBD1-224ENST00000591416 FAM69CQ0P6D2 419 aa20.6■□□□□ 0.89
MBD1-224ENST00000591416 HAP1P54257 671 aaPredicted RBP20.59■□□□□ 0.89
MBD1-224ENST00000591416 TNNT2P45379 298 aaPredicted RBP20.58■□□□□ 0.89
MBD1-224ENST00000591416 MYT1Q01538 1121 aa20.58■□□□□ 0.89
MBD1-224ENST00000591416 KIF15Q9NS87 1388 aa20.57■□□□□ 0.88
MBD1-224ENST00000591416 LMOD2Q6P5Q4 547 aa20.56■□□□□ 0.88
MBD1-224ENST00000591416 MAPK8IP3Q9UPT6 1336 aa20.55■□□□□ 0.88
MBD1-224ENST00000591416 EIF3AQ14152 1382 aaKnown RBP20.55■□□□□ 0.88
MBD1-224ENST00000591416 CCER2I3L3R5 266 aa20.53■□□□□ 0.88
MBD1-224ENST00000591416 CUL7Q14999 1698 aa20.53■□□□□ 0.88
MBD1-224ENST00000591416 SENP3-EIF4A1A0A087X0R7 540 aa20.53■□□□□ 0.88
MBD1-224ENST00000591416 ANP32AP39687 249 aaKnown RBP20.53■□□□□ 0.88
MBD1-224ENST00000591416 TROQ12816 1431 aaPredicted RBP20.51■□□□□ 0.87
MBD1-224ENST00000591416 MAGI1Q96QZ7 1491 aaPredicted RBP20.51■□□□□ 0.87
MBD1-224ENST00000591416 IRX6P78412 446 aaPredicted RBP20.51■□□□□ 0.87
MBD1-224ENST00000591416 NEUROD2Q15784 382 aa20.51■□□□□ 0.87
MBD1-224ENST00000591416 MORC1Q86VD1 984 aa20.51■□□□□ 0.87
MBD1-224ENST00000591416 EID1Q9Y6B2 187 aa20.5■□□□□ 0.87
MBD1-224ENST00000591416 BIVM-ERCC5R4GMW8 1640 aa20.5■□□□□ 0.87
MBD1-224ENST00000591416 EHBP1L1Q8N3D4 1523 aa20.5■□□□□ 0.87
MBD1-224ENST00000591416 RRBP1Q9P2E9 1410 aaKnown RBP20.49■□□□□ 0.87
MBD1-224ENST00000591416 ANKRD50Q9ULJ7 1429 aa20.49■□□□□ 0.87
MBD1-224ENST00000591416 IQGAP2Q13576 1575 aa20.49■□□□□ 0.87
MBD1-224ENST00000591416 HDGFL2Q7Z4V5 671 aaPredicted RBP20.49■□□□□ 0.87
MBD1-224ENST00000591416 UACAQ9BZF9 1416 aa20.49■□□□□ 0.87
MBD1-224ENST00000591416 U2SURPO15042 1029 aaKnown RBP20.48■□□□□ 0.87
MBD1-224ENST00000591416 KTN1Q86UP2 1357 aaKnown RBP20.48■□□□□ 0.87
MBD1-224ENST00000591416 ARHGAP5Q13017 1502 aa20.48■□□□□ 0.87
MBD1-224ENST00000591416 HECW1Q76N89 1606 aa20.48■□□□□ 0.87
MBD1-224ENST00000591416 GRIN2AQ12879 1464 aa20.46■□□□□ 0.87
MBD1-224ENST00000591416 NUTM2DQ5VT03 806 aaPredicted RBP20.46■□□□□ 0.87
MBD1-224ENST00000591416 MIA2Q96PC5 1412 aa20.46■□□□□ 0.87
MBD1-224ENST00000591416 A0A0G2JS52 829 aa20.46■□□□□ 0.87
MBD1-224ENST00000591416 NPM2Q86SE8 214 aaKnown RBP20.45■□□□□ 0.86
MBD1-224ENST00000591416 AFAP1Q8N556 730 aa20.45■□□□□ 0.86
MBD1-224ENST00000591416 PNNQ9H307 717 aaKnown RBP20.45■□□□□ 0.86
MBD1-224ENST00000591416 TIAM1Q13009 1591 aa20.45■□□□□ 0.86
MBD1-224ENST00000591416 UPF2Q9HAU5 1272 aaKnown RBP20.44■□□□□ 0.86
MBD1-224ENST00000591416 VGFO15240 615 aaPredicted RBP20.44■□□□□ 0.86
MBD1-224ENST00000591416 ZNF608Q9ULD9 1512 aaPredicted RBP20.43■□□□□ 0.86
MBD1-224ENST00000591416 MYH16Q9H6N6 1097 aa20.42■□□□□ 0.86
MBD1-224ENST00000591416 RALBP1Q15311 655 aa20.42■□□□□ 0.86
MBD1-224ENST00000591416 SUPT16HQ9Y5B9 1047 aaKnown RBP20.39■□□□□ 0.86
MBD1-224ENST00000591416 ST20-MTHFSA0A0A6YYL1 179 aa20.39■□□□□ 0.86
MBD1-224ENST00000591416 EPRSP07814 1512 aaKnown RBP20.39■□□□□ 0.85
MBD1-224ENST00000591416 TRAK1Q9UPV9 953 aa20.39■□□□□ 0.85
MBD1-224ENST00000591416 PLEKHH2Q8IVE3 1493 aa20.38■□□□□ 0.85
MBD1-224ENST00000591416 SOX12O15370 315 aa20.37■□□□□ 0.85
MBD1-224ENST00000591416 TERF2IPQ9NYB0 399 aa20.37■□□□□ 0.85
MBD1-224ENST00000591416 LAS1LQ9Y4W2 734 aaKnown RBP20.36■□□□□ 0.85
MBD1-224ENST00000591416 STAC3Q96MF2 364 aa20.34■□□□□ 0.85
MBD1-224ENST00000591416 CDK13Q14004 1512 aaKnown RBP20.33■□□□□ 0.85
MBD1-224ENST00000591416 C9orf84Q5VXU9 1444 aa20.32■□□□□ 0.84
MBD1-224ENST00000591416 USP47Q96K76 1375 aa20.31■□□□□ 0.84
MBD1-224ENST00000591416 FTSJ3Q8IY81 847 aaKnown RBP20.31■□□□□ 0.84
MBD1-224ENST00000591416 SUPT6HQ7KZ85 1726 aaKnown RBP20.3■□□□□ 0.84
MBD1-224ENST00000591416 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.29■□□□□ 0.84
MBD1-224ENST00000591416 PCF11O94913 1555 aaKnown RBP20.29■□□□□ 0.84
MBD1-224ENST00000591416 PLB1Q6P1J6 1458 aa20.29■□□□□ 0.84
MBD1-224ENST00000591416 PAK3O75914 559 aaPredicted RBP20.28■□□□□ 0.84
MBD1-224ENST00000591416 NLRP13Q86W25 1043 aa20.27■□□□□ 0.84
MBD1-224ENST00000591416 HFM1A2PYH4 1435 aa20.27■□□□□ 0.84
MBD1-224ENST00000591416 HSP90AA1P07900 732 aaKnown RBP20.26■□□□□ 0.83
MBD1-224ENST00000591416 SCAPERQ9BY12 1400 aa20.26■□□□□ 0.83
MBD1-224ENST00000591416 U2AF1L5P0DN76 240 aaPredicted RBP20.25■□□□□ 0.83
MBD1-224ENST00000591416 U2AF1Q01081 240 aaKnown RBP eCLIP20.25■□□□□ 0.83
MBD1-224ENST00000591416 FRAT1Q92837 279 aaPredicted RBP20.24■□□□□ 0.83
MBD1-224ENST00000591416 MAP3K1Q13233 1512 aa20.24■□□□□ 0.83
MBD1-224ENST00000591416 DAPK1P53355 1430 aa20.23■□□□□ 0.83
MBD1-224ENST00000591416 NGDNQ8NEJ9 315 aaKnown RBP20.23■□□□□ 0.83
MBD1-224ENST00000591416 MS4A1P11836 297 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms