RNA–Protein interactions for RNA: ENST00000591304.1

CLPTM1-212, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 528 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-212ENST00000591304 CDC42BPBQ9Y5S2 1711 aa37.16■■■■□ 3.54
CLPTM1-212ENST00000591304 ZMYM4Q5VZL5 1548 aa37.16■■■■□ 3.54
CLPTM1-212ENST00000591304 PREX2Q70Z35 1606 aa37.14■■■■□ 3.54
CLPTM1-212ENST00000591304 MAGI2Q86UL8 1455 aa37.13■■■■□ 3.53
CLPTM1-212ENST00000591304 POGZQ7Z3K3 1410 aa37.12■■■■□ 3.53
CLPTM1-212ENST00000591304 ARHGEF40Q8TER5 1519 aa37.1■■■■□ 3.53
CLPTM1-212ENST00000591304 MTUS2Q5JR59 1369 aa37.09■■■■□ 3.53
CLPTM1-212ENST00000591304 CDC42BPAQ5VT25 1732 aa37.09■■■■□ 3.53
CLPTM1-212ENST00000591304 ZFYVE16Q7Z3T8 1539 aa37.05■■■■□ 3.52
CLPTM1-212ENST00000591304 ZNF518AQ6AHZ1 1483 aa37.03■■■■□ 3.52
CLPTM1-212ENST00000591304 VPS8Q8N3P4 1428 aa37.02■■■■□ 3.52
CLPTM1-212ENST00000591304 EHBP1L1Q8N3D4 1523 aa37■■■■□ 3.51
CLPTM1-212ENST00000591304 GPATCH8Q9UKJ3 1502 aaKnown RBP36.97■■■■□ 3.51
CLPTM1-212ENST00000591304 ARID4BQ4LE39 1312 aaPredicted RBP36.97■■■■□ 3.51
CLPTM1-212ENST00000591304 ABCC1P33527 1531 aa36.95■■■■□ 3.51
CLPTM1-212ENST00000591304 KDM5CP41229 1560 aa36.95■■■■□ 3.51
CLPTM1-212ENST00000591304 YEATS2Q9ULM3 1422 aa36.94■■■■□ 3.5
CLPTM1-212ENST00000591304 CCNB3Q8WWL7 1395 aa36.94■■■■□ 3.5
CLPTM1-212ENST00000591304 BCORL1Q5H9F3 1711 aa36.93■■■■□ 3.5
CLPTM1-212ENST00000591304 ADAMTSL3P82987 1691 aa36.92■■■■□ 3.5
CLPTM1-212ENST00000591304 ITSN2Q9NZM3 1697 aa36.92■■■■□ 3.5
CLPTM1-212ENST00000591304 AFAP1Q8N556 730 aa36.9■■■■□ 3.5
CLPTM1-212ENST00000591304 TIAM1Q13009 1591 aa36.89■■■■□ 3.5
CLPTM1-212ENST00000591304 CFDP1Q9UEE9 299 aaPredicted RBP36.88■■■■□ 3.49
CLPTM1-212ENST00000591304 ATP10AO60312 1499 aa36.88■■■■□ 3.49
CLPTM1-212ENST00000591304 HECW2Q9P2P5 1572 aa36.87■■■■□ 3.49
CLPTM1-212ENST00000591304 ZNF777Q9ULD5 760 aaPredicted RBP36.86■■■■□ 3.49
CLPTM1-212ENST00000591304 PLEKHH2Q8IVE3 1493 aa36.85■■■■□ 3.49
CLPTM1-212ENST00000591304 ARHGEF12Q9NZN5 1544 aa36.85■■■■□ 3.49
CLPTM1-212ENST00000591304 SAMD9LQ8IVG5 1584 aa36.84■■■■□ 3.49
CLPTM1-212ENST00000591304 MLH3Q9UHC1 1453 aa36.84■■■■□ 3.49
CLPTM1-212ENST00000591304 SUPT6HQ7KZ85 1726 aaKnown RBP36.84■■■■□ 3.49
CLPTM1-212ENST00000591304 MYT1LQ9UL68 1186 aa36.83■■■■□ 3.49
CLPTM1-212ENST00000591304 C9orf84Q5VXU9 1444 aa36.83■■■■□ 3.49
CLPTM1-212ENST00000591304 TRAPPC8Q9Y2L5 1435 aa36.82■■■■□ 3.48
CLPTM1-212ENST00000591304 MAP3K1Q13233 1512 aa36.81■■■■□ 3.48
CLPTM1-212ENST00000591304 KIAA1107Q9UPP5 1409 aa36.8■■■■□ 3.48
CLPTM1-212ENST00000591304 SYCP2Q9BX26 1530 aa36.75■■■■□ 3.47
CLPTM1-212ENST00000591304 MADDQ8WXG6 1647 aa36.75■■■■□ 3.47
CLPTM1-212ENST00000591304 SIGLEC1Q9BZZ2 1709 aa36.75■■■■□ 3.47
CLPTM1-212ENST00000591304 PTPRMP28827 1452 aa36.74■■■■□ 3.47
CLPTM1-212ENST00000591304 NCOA2Q15596 1464 aa36.74■■■■□ 3.47
CLPTM1-212ENST00000591304 LRRC9Q6ZRR7 1453 aa36.74■■■■□ 3.47
CLPTM1-212ENST00000591304 REREQ9P2R6 1566 aa36.73■■■■□ 3.47
CLPTM1-212ENST00000591304 DIP2CQ9Y2E4 1556 aa36.72■■■■□ 3.47
CLPTM1-212ENST00000591304 HNRNPMP52272 730 aaKnown RBP eCLIP36.7■■■■□ 3.473e-10■■■■■ 34.9
CLPTM1-212ENST00000591304 KIDINS220Q9ULH0 1771 aa36.69■■■■□ 3.46
CLPTM1-212ENST00000591304 ABCA6Q8N139 1617 aa36.69■■■■□ 3.46
CLPTM1-212ENST00000591304 APLP2Q06481 763 aa36.66■■■■□ 3.46
CLPTM1-212ENST00000591304 SPAG9O60271 1321 aaKnown RBP36.65■■■■□ 3.46
CLPTM1-212ENST00000591304 RIMS1Q86UR5 1692 aaKnown RBP36.65■■■■□ 3.46
CLPTM1-212ENST00000591304 MLECQ14165 292 aa36.62■■■■□ 3.45
CLPTM1-212ENST00000591304 FER1L4A9Z1Z3 1794 aa36.61■■■■□ 3.45
CLPTM1-212ENST00000591304 AGLP35573 1532 aa36.59■■■■□ 3.45
CLPTM1-212ENST00000591304 ZNF644Q9H582 1327 aaPredicted RBP36.59■■■■□ 3.45
CLPTM1-212ENST00000591304 KANK4Q5T7N3 995 aaPredicted RBP36.57■■■■□ 3.44
CLPTM1-212ENST00000591304 ATP7AQ04656 1500 aa36.57■■■■□ 3.44
CLPTM1-212ENST00000591304 INO80Q9ULG1 1556 aaPredicted RBP36.56■■■■□ 3.44
CLPTM1-212ENST00000591304 MBD5Q9P267 1494 aa36.56■■■■□ 3.44
CLPTM1-212ENST00000591304 RSPH4AQ5TD94 716 aa36.55■■■■□ 3.44
CLPTM1-212ENST00000591304 CAMSAP2Q08AD1 1489 aa36.51■■■■□ 3.44
CLPTM1-212ENST00000591304 RTEL1-TNFRSF6BF6WH68 1400 aa36.47■■■■□ 3.43
CLPTM1-212ENST00000591304 CCDC141Q6ZP82 1450 aa36.46■■■■□ 3.43
CLPTM1-212ENST00000591304 ADGBQ8N7X0 1667 aa36.45■■■■□ 3.42
CLPTM1-212ENST00000591304 MIA2Q96PC5 1412 aa36.44■■■■□ 3.42
CLPTM1-212ENST00000591304 MYOM3Q5VTT5 1437 aa36.43■■■■□ 3.42
CLPTM1-212ENST00000591304 ARHGEF5Q12774 1597 aa36.42■■■■□ 3.42
CLPTM1-212ENST00000591304 ESF1Q9H501 851 aaKnown RBP36.41■■■■□ 3.42
CLPTM1-212ENST00000591304 A2MP01023 1474 aa36.41■■■■□ 3.42
CLPTM1-212ENST00000591304 PLXNC1O60486 1568 aa36.39■■■■□ 3.42
CLPTM1-212ENST00000591304 TSPY4P0CV99 314 aa36.35■■■■□ 3.41
CLPTM1-212ENST00000591304 TSPY10P0CW01 314 aa36.35■■■■□ 3.41
CLPTM1-212ENST00000591304 PLPPR3Q6T4P5 718 aa36.35■■■■□ 3.41
CLPTM1-212ENST00000591304 CNTLNQ9NXG0 1405 aa36.33■■■■□ 3.41
CLPTM1-212ENST00000591304 LMTK3Q96Q04 1460 aa36.28■■■■□ 3.4
CLPTM1-212ENST00000591304 DHX29Q7Z478 1369 aaKnown RBP36.27■■■■□ 3.4
CLPTM1-212ENST00000591304 SETD1BQ9UPS6 1966 aaKnown RBP36.26■■■■□ 3.39
CLPTM1-212ENST00000591304 PPP6R1Q9UPN7 881 aa36.25■■■■□ 3.39
CLPTM1-212ENST00000591304 C3P01024 1663 aa36.24■■■■□ 3.39
CLPTM1-212ENST00000591304 MAST1Q9Y2H9 1570 aa36.23■■■■□ 3.39
CLPTM1-212ENST00000591304 MROH2AA6NES4 1674 aa36.23■■■■□ 3.39
CLPTM1-212ENST00000591304 CEBPAP49715 358 aaPredicted RBP36.23■■■■□ 3.39
CLPTM1-212ENST00000591304 PREX1Q8TCU6 1659 aa36.21■■■■□ 3.39
CLPTM1-212ENST00000591304 PTPN23Q9H3S7 1636 aa36.2■■■■□ 3.39
CLPTM1-212ENST00000591304 GGT6Q6P531 493 aa36.18■■■■□ 3.38
CLPTM1-212ENST00000591304 FGD6Q6ZV73 1430 aa36.17■■■■□ 3.38
CLPTM1-212ENST00000591304 CLTCQ00610 1675 aaKnown RBP36.13■■■■□ 3.37
CLPTM1-212ENST00000591304 ZMYM3Q14202 1370 aa36.12■■■■□ 3.37
CLPTM1-212ENST00000591304 TCOF1Q13428 1488 aaKnown RBP36.11■■■■□ 3.37
CLPTM1-212ENST00000591304 KIF3BO15066 747 aa36.1■■■■□ 3.37
CLPTM1-212ENST00000591304 UHRF1BP1Q6BDS2 1440 aa36.09■■■■□ 3.37
CLPTM1-212ENST00000591304 SHANK2Q9UPX8 1470 aa36.08■■■■□ 3.37
CLPTM1-212ENST00000591304 CROCC2H7BZ55 1655 aa36.07■■■■□ 3.37
CLPTM1-212ENST00000591304 FAM135AQ9P2D6 1515 aa36.07■■■■□ 3.36
CLPTM1-212ENST00000591304 NPATQ14207 1427 aa36.07■■■■□ 3.36
CLPTM1-212ENST00000591304 DNMT1P26358 1616 aaKnown RBP36.05■■■■□ 3.36
CLPTM1-212ENST00000591304 ABCC5O15440 1437 aa36.04■■■■□ 3.36
CLPTM1-212ENST00000591304 HSPA2P54652 639 aa36.04■■■■□ 3.36
CLPTM1-212ENST00000591304 EIF2AK4Q9P2K8 1649 aaKnown RBP36.01■■■■□ 3.36
CLPTM1-212ENST00000591304 DAPK1P53355 1430 aa36.01■■■■□ 3.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms