RNA–Protein interactions for RNA: ENST00000590843.1

SEH1L-208, Transcript of SEH1 like nucleoporin, humanhuman

TSL 1 (best)

Gene SEH1L, Length 5,206 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-208ENST00000590843 CARD11Q9BXL7 1154 aa15.17■□□□□ 0.02
SEH1L-208ENST00000590843 MYH16Q9H6N6 1097 aa15.17■□□□□ 0.02
SEH1L-208ENST00000590843 PROSER2Q86WR7 435 aaPredicted RBP15.17■□□□□ 0.02
SEH1L-208ENST00000590843 EIF3AQ14152 1382 aaKnown RBP15.16■□□□□ 0.02
SEH1L-208ENST00000590843 SNAPC4Q5SXM2 1469 aa15.15■□□□□ 0.02
SEH1L-208ENST00000590843 GOLGA2Q08379 1002 aa15.15■□□□□ 0.02
SEH1L-208ENST00000590843 BCL11AQ9H165 835 aa15.14■□□□□ 0.01
SEH1L-208ENST00000590843 PSME1Q06323 249 aa15.14■□□□□ 0.01
SEH1L-208ENST00000590843 MSH5O43196 834 aa15.13■□□□□ 0.01
SEH1L-208ENST00000590843 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.13■□□□□ 0.01
SEH1L-208ENST00000590843 TMF1P82094 1093 aa15.12■□□□□ 0.01
SEH1L-208ENST00000590843 NUP155O75694 1391 aa15.12■□□□□ 0.01
SEH1L-208ENST00000590843 TERF2IPQ9NYB0 399 aa15.12■□□□□ 0.01
SEH1L-208ENST00000590843 TEX14Q8IWB6 1497 aa15.12■□□□□ 0.01
SEH1L-208ENST00000590843 MAGI1Q96QZ7 1491 aaPredicted RBP15.11■□□□□ 0.01
SEH1L-208ENST00000590843 G3V3G9 751 aa15.11■□□□□ 0.01
SEH1L-208ENST00000590843 DCAF8Q5TAQ9 597 aa15.11■□□□□ 0.01
SEH1L-208ENST00000590843 TOPBP1Q92547 1522 aa15.1■□□□□ 0.01
SEH1L-208ENST00000590843 PIP4K2BP78356 416 aa15.1■□□□□ 0.01
SEH1L-208ENST00000590843 RTF1Q92541 710 aaKnown RBP15.1■□□□□ 0.01
SEH1L-208ENST00000590843 TOM1O60784 492 aa15.09■□□□□ 0.01
SEH1L-208ENST00000590843 PLEKHH2Q8IVE3 1493 aa15.09■□□□□ 0.01
SEH1L-208ENST00000590843 SAFB2Q14151 953 aaKnown RBP eCLIP15.08■□□□□ 0.01
SEH1L-208ENST00000590843 SOX12O15370 315 aa15.08■□□□□ 0
SEH1L-208ENST00000590843 DNMBPQ6XZF7 1577 aa15.07■□□□□ 0
SEH1L-208ENST00000590843 FHOD3Q2V2M9 1422 aa15.07■□□□□ 0
SEH1L-208ENST00000590843 DCAF11Q8TEB1 546 aa15.06■□□□□ 0
SEH1L-208ENST00000590843 TXNDC2Q86VQ3 553 aa15.06■□□□□ 0
SEH1L-208ENST00000590843 PKD2Q13563 968 aa15.05■□□□□ -0
SEH1L-208ENST00000590843 AKNAQ7Z591 1439 aa15.03■□□□□ -0
SEH1L-208ENST00000590843 PLB1Q6P1J6 1458 aa15.03■□□□□ -0
SEH1L-208ENST00000590843 GTF2E1P29083 439 aaPredicted RBP15.03■□□□□ -0
SEH1L-208ENST00000590843 PHLDB1Q86UU1 1377 aa15.02□□□□□ -0.01
SEH1L-208ENST00000590843 AMPHP49418 695 aa15.02□□□□□ -0.01
SEH1L-208ENST00000590843 CHMP4BQ9H444 224 aaKnown RBP15.01□□□□□ -0.01
SEH1L-208ENST00000590843 CD109Q6YHK3 1445 aa15.01□□□□□ -0.01
SEH1L-208ENST00000590843 KLHL34Q8N239 644 aa15.01□□□□□ -0.01
SEH1L-208ENST00000590843 DNAJC5Q9H3Z4 198 aa15□□□□□ -0.01
SEH1L-208ENST00000590843 GPRASP1Q5JY77 1395 aa15□□□□□ -0.01
SEH1L-208ENST00000590843 PPP6R1Q9UPN7 881 aa15□□□□□ -0.01
SEH1L-208ENST00000590843 STAC3Q96MF2 364 aa15□□□□□ -0.01
SEH1L-208ENST00000590843 IGF1RP08069 1367 aa15□□□□□ -0.01
SEH1L-208ENST00000590843 ARHGAP5Q13017 1502 aa14.98□□□□□ -0.01
SEH1L-208ENST00000590843 CALD1Q05682 793 aaKnown RBP14.96□□□□□ -0.01
SEH1L-208ENST00000590843 HDAC5Q9UQL6 1122 aa14.96□□□□□ -0.01
SEH1L-208ENST00000590843 POLA1P09884 1462 aaPredicted RBP14.96□□□□□ -0.02
SEH1L-208ENST00000590843 KIAA0586Q9BVV6 1533 aa14.96□□□□□ -0.02
SEH1L-208ENST00000590843 UBAP1LF5GYI3 381 aa14.96□□□□□ -0.02
SEH1L-208ENST00000590843 MORC1Q86VD1 984 aa14.95□□□□□ -0.02
SEH1L-208ENST00000590843 U2SURPO15042 1029 aaKnown RBP14.95□□□□□ -0.02
SEH1L-208ENST00000590843 BICRAQ9NZM4 1560 aa14.94□□□□□ -0.02
SEH1L-208ENST00000590843 ANO8Q9HCE9 1232 aaPredicted RBP14.94□□□□□ -0.02
SEH1L-208ENST00000590843 NUTM2BA6NNL0 878 aaPredicted RBP14.94□□□□□ -0.02
SEH1L-208ENST00000590843 NUTM2EB1AL46 878 aaPredicted RBP14.94□□□□□ -0.02
SEH1L-208ENST00000590843 NUTM2AQ8IVF1 878 aaPredicted RBP14.94□□□□□ -0.02
SEH1L-208ENST00000590843 ZNF330Q9Y3S2 320 aaPredicted RBP14.93□□□□□ -0.02
SEH1L-208ENST00000590843 SLC52A1Q9NWF4 448 aa14.92□□□□□ -0.02
SEH1L-208ENST00000590843 SETD5Q9C0A6 1442 aa14.92□□□□□ -0.02
SEH1L-208ENST00000590843 VPS8Q8N3P4 1428 aa14.92□□□□□ -0.02
SEH1L-208ENST00000590843 EIF5BO60841 1220 aaKnown RBP14.91□□□□□ -0.02
SEH1L-208ENST00000590843 PPP1R1BQ9UD71 204 aaPredicted RBP14.91□□□□□ -0.02
SEH1L-208ENST00000590843 PRDM2Q13029 1718 aa14.9□□□□□ -0.02
SEH1L-208ENST00000590843 C1orf141Q5JVX7 400 aa14.89□□□□□ -0.03
SEH1L-208ENST00000590843 MYOM3Q5VTT5 1437 aa14.89□□□□□ -0.03
SEH1L-208ENST00000590843 DHX57Q6P158 1386 aaKnown RBP14.89□□□□□ -0.03
SEH1L-208ENST00000590843 NUTM2DQ5VT03 806 aaPredicted RBP14.88□□□□□ -0.03
SEH1L-208ENST00000590843 HRCP23327 699 aa14.88□□□□□ -0.03
SEH1L-208ENST00000590843 SCAPERQ9BY12 1400 aa14.88□□□□□ -0.03
SEH1L-208ENST00000590843 CCDC144AA2RUR9 1427 aa14.88□□□□□ -0.03
SEH1L-208ENST00000590843 PDE3BQ13370 1112 aa14.87□□□□□ -0.03
SEH1L-208ENST00000590843 EVC2Q86UK5 1308 aa14.87□□□□□ -0.03
SEH1L-208ENST00000590843 NUTM2FA1L443 756 aa14.87□□□□□ -0.03
SEH1L-208ENST00000590843 MS4A1P11836 297 aa14.86□□□□□ -0.03
SEH1L-208ENST00000590843 COG3Q96JB2 828 aa14.86□□□□□ -0.03
SEH1L-208ENST00000590843 RAPGEF3O95398 923 aa14.86□□□□□ -0.03
SEH1L-208ENST00000590843 LAS1LQ9Y4W2 734 aaKnown RBP14.85□□□□□ -0.03
SEH1L-208ENST00000590843 DENND4BO75064 1496 aaPredicted RBP14.85□□□□□ -0.03
SEH1L-208ENST00000590843 OS9Q13438 667 aaPredicted RBP14.84□□□□□ -0.03
SEH1L-208ENST00000590843 TIMELESSQ9UNS1 1208 aa14.84□□□□□ -0.03
SEH1L-208ENST00000590843 RAPGEF4Q8WZA2 1011 aa14.83□□□□□ -0.03
SEH1L-208ENST00000590843 GRIN2AQ12879 1464 aa14.83□□□□□ -0.03
SEH1L-208ENST00000590843 UPF2Q9HAU5 1272 aaKnown RBP14.83□□□□□ -0.04
SEH1L-208ENST00000590843 LMOD3Q0VAK6 560 aa14.83□□□□□ -0.04
SEH1L-208ENST00000590843 AFAP1Q8N556 730 aa14.83□□□□□ -0.04
SEH1L-208ENST00000590843 SYTL4Q96C24 671 aaPredicted RBP14.83□□□□□ -0.04
SEH1L-208ENST00000590843 ESCO1Q5FWF5 840 aa14.82□□□□□ -0.04
SEH1L-208ENST00000590843 CDK11BP21127 795 aaKnown RBP14.82□□□□□ -0.04
SEH1L-208ENST00000590843 TNNT2P45379 298 aaPredicted RBP14.82□□□□□ -0.04
SEH1L-208ENST00000590843 LRPPRCP42704 1394 aaKnown RBP14.82□□□□□ -0.04
SEH1L-208ENST00000590843 TTC5Q8N0Z6 440 aa14.82□□□□□ -0.04
SEH1L-208ENST00000590843 ROCK2O75116 1388 aaKnown RBP14.81□□□□□ -0.04
SEH1L-208ENST00000590843 TAF7LQ5H9L4 462 aa14.8□□□□□ -0.04
SEH1L-208ENST00000590843 DIEXFQ68CQ4 756 aaKnown RBP14.79□□□□□ -0.04
SEH1L-208ENST00000590843 LTV1Q96GA3 475 aaPredicted RBP14.79□□□□□ -0.04
SEH1L-208ENST00000590843 NGLY1Q96IV0 654 aa14.79□□□□□ -0.04
SEH1L-208ENST00000590843 MPHOSPH9Q99550 1183 aa14.79□□□□□ -0.04
SEH1L-208ENST00000590843 HSP90B1P14625 803 aaKnown RBP14.79□□□□□ -0.04
SEH1L-208ENST00000590843 KIF15Q9NS87 1388 aa14.78□□□□□ -0.04
SEH1L-208ENST00000590843 ABCA10Q8WWZ4 1543 aa14.78□□□□□ -0.04
SEH1L-208ENST00000590843 MRS2Q9HD23 443 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms