RNA–Protein interactions for RNA: ENST00000590635.5

CTDP1-206, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 5

Gene CTDP1, Length 489 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-206ENST00000590635 MAGI2Q86UL8 1455 aa19.25■□□□□ 0.67
CTDP1-206ENST00000590635 POGZQ7Z3K3 1410 aa19.23■□□□□ 0.67
CTDP1-206ENST00000590635 CCNB3Q8WWL7 1395 aa19.21■□□□□ 0.67
CTDP1-206ENST00000590635 FRMPD1Q5SYB0 1578 aa19.21■□□□□ 0.67
CTDP1-206ENST00000590635 ZMYM4Q5VZL5 1548 aa19.2■□□□□ 0.66
CTDP1-206ENST00000590635 RICTORQ6R327 1708 aa19.2■□□□□ 0.66
CTDP1-206ENST00000590635 CFDP1Q9UEE9 299 aaPredicted RBP19.2■□□□□ 0.66
CTDP1-206ENST00000590635 ZNF518AQ6AHZ1 1483 aa19.2■□□□□ 0.66
CTDP1-206ENST00000590635 EHBP1L1Q8N3D4 1523 aa19.19■□□□□ 0.66
CTDP1-206ENST00000590635 GPATCH8Q9UKJ3 1502 aaKnown RBP19.19■□□□□ 0.66
CTDP1-206ENST00000590635 ARID4BQ4LE39 1312 aaPredicted RBP19.19■□□□□ 0.66
CTDP1-206ENST00000590635 AFAP1Q8N556 730 aa19.18■□□□□ 0.66
CTDP1-206ENST00000590635 PREX2Q70Z35 1606 aa19.18■□□□□ 0.66
CTDP1-206ENST00000590635 APLP2Q06481 763 aa19.17■□□□□ 0.66
CTDP1-206ENST00000590635 ZNF777Q9ULD5 760 aaPredicted RBP19.17■□□□□ 0.66
CTDP1-206ENST00000590635 MYT1LQ9UL68 1186 aa19.16■□□□□ 0.66
CTDP1-206ENST00000590635 CDC42BPBQ9Y5S2 1711 aa19.16■□□□□ 0.66
CTDP1-206ENST00000590635 ZFYVE16Q7Z3T8 1539 aa19.15■□□□□ 0.66
CTDP1-206ENST00000590635 PLEKHH2Q8IVE3 1493 aa19.14■□□□□ 0.65
CTDP1-206ENST00000590635 MAP3K1Q13233 1512 aa19.14■□□□□ 0.65
CTDP1-206ENST00000590635 ARHGEF40Q8TER5 1519 aa19.14■□□□□ 0.65
CTDP1-206ENST00000590635 KIAA1107Q9UPP5 1409 aa19.13■□□□□ 0.65
CTDP1-206ENST00000590635 CDC42BPAQ5VT25 1732 aa19.12■□□□□ 0.65
CTDP1-206ENST00000590635 TIAM1Q13009 1591 aa19.12■□□□□ 0.65
CTDP1-206ENST00000590635 YEATS2Q9ULM3 1422 aa19.12■□□□□ 0.65
CTDP1-206ENST00000590635 ATP10AO60312 1499 aa19.11■□□□□ 0.65
CTDP1-206ENST00000590635 ABCC1P33527 1531 aa19.1■□□□□ 0.65
CTDP1-206ENST00000590635 MLH3Q9UHC1 1453 aa19.1■□□□□ 0.65
CTDP1-206ENST00000590635 KDM5CP41229 1560 aa19.1■□□□□ 0.65
CTDP1-206ENST00000590635 HNRNPMP52272 730 aaKnown RBP eCLIP19.09■□□□□ 0.656e-6■■■■□ 21.7
CTDP1-206ENST00000590635 LRRC9Q6ZRR7 1453 aa19.09■□□□□ 0.65
CTDP1-206ENST00000590635 TRAPPC8Q9Y2L5 1435 aa19.08■□□□□ 0.65
CTDP1-206ENST00000590635 RSPH4AQ5TD94 716 aa19.08■□□□□ 0.64
CTDP1-206ENST00000590635 ARHGEF12Q9NZN5 1544 aa19.08■□□□□ 0.64
CTDP1-206ENST00000590635 NCOA2Q15596 1464 aa19.08■□□□□ 0.64
CTDP1-206ENST00000590635 C9orf84Q5VXU9 1444 aa19.08■□□□□ 0.64
CTDP1-206ENST00000590635 SUPT6HQ7KZ85 1726 aaKnown RBP19.06■□□□□ 0.64
CTDP1-206ENST00000590635 SPAG9O60271 1321 aaKnown RBP19.05■□□□□ 0.64
CTDP1-206ENST00000590635 KANK4Q5T7N3 995 aaPredicted RBP19.04■□□□□ 0.64
CTDP1-206ENST00000590635 SAMD9LQ8IVG5 1584 aa19.04■□□□□ 0.64
CTDP1-206ENST00000590635 HECW2Q9P2P5 1572 aa19.04■□□□□ 0.64
CTDP1-206ENST00000590635 ITSN2Q9NZM3 1697 aa19.04■□□□□ 0.64
CTDP1-206ENST00000590635 ADAMTSL3P82987 1691 aa19.01■□□□□ 0.63
CTDP1-206ENST00000590635 SYCP2Q9BX26 1530 aa19.01■□□□□ 0.63
CTDP1-206ENST00000590635 BCORL1Q5H9F3 1711 aa19.01■□□□□ 0.63
CTDP1-206ENST00000590635 ZNF644Q9H582 1327 aaPredicted RBP19■□□□□ 0.63
CTDP1-206ENST00000590635 MLECQ14165 292 aa18.99■□□□□ 0.63
CTDP1-206ENST00000590635 REREQ9P2R6 1566 aa18.98■□□□□ 0.63
CTDP1-206ENST00000590635 PTPRMP28827 1452 aa18.98■□□□□ 0.63
CTDP1-206ENST00000590635 MBD5Q9P267 1494 aa18.97■□□□□ 0.63
CTDP1-206ENST00000590635 TSPY4P0CV99 314 aa18.96■□□□□ 0.63
CTDP1-206ENST00000590635 TSPY10P0CW01 314 aa18.96■□□□□ 0.63
CTDP1-206ENST00000590635 MIA2Q96PC5 1412 aa18.96■□□□□ 0.63
CTDP1-206ENST00000590635 DIP2CQ9Y2E4 1556 aa18.96■□□□□ 0.63
CTDP1-206ENST00000590635 RTEL1-TNFRSF6BF6WH68 1400 aa18.95■□□□□ 0.62
CTDP1-206ENST00000590635 ESF1Q9H501 851 aaKnown RBP18.95■□□□□ 0.62
CTDP1-206ENST00000590635 AGLP35573 1532 aa18.95■□□□□ 0.62
CTDP1-206ENST00000590635 KIDINS220Q9ULH0 1771 aa18.93■□□□□ 0.62
CTDP1-206ENST00000590635 MYOM3Q5VTT5 1437 aa18.93■□□□□ 0.62
CTDP1-206ENST00000590635 MADDQ8WXG6 1647 aa18.92■□□□□ 0.62
CTDP1-206ENST00000590635 CAMSAP2Q08AD1 1489 aa18.92■□□□□ 0.62
CTDP1-206ENST00000590635 ATP7AQ04656 1500 aa18.92■□□□□ 0.62
CTDP1-206ENST00000590635 ABCA6Q8N139 1617 aa18.92■□□□□ 0.62
CTDP1-206ENST00000590635 CCDC141Q6ZP82 1450 aa18.91■□□□□ 0.62
CTDP1-206ENST00000590635 PPP6R1Q9UPN7 881 aa18.88■□□□□ 0.61
CTDP1-206ENST00000590635 A2MP01023 1474 aa18.88■□□□□ 0.61
CTDP1-206ENST00000590635 SIGLEC1Q9BZZ2 1709 aa18.88■□□□□ 0.61
CTDP1-206ENST00000590635 INO80Q9ULG1 1556 aaPredicted RBP18.87■□□□□ 0.61
CTDP1-206ENST00000590635 ARHGEF5Q12774 1597 aa18.86■□□□□ 0.61
CTDP1-206ENST00000590635 RIMS1Q86UR5 1692 aaKnown RBP18.85■□□□□ 0.61
CTDP1-206ENST00000590635 CNTLNQ9NXG0 1405 aa18.85■□□□□ 0.61
CTDP1-206ENST00000590635 DHX29Q7Z478 1369 aaKnown RBP18.85■□□□□ 0.61
CTDP1-206ENST00000590635 PLPPR3Q6T4P5 718 aa18.83■□□□□ 0.6
CTDP1-206ENST00000590635 FER1L4A9Z1Z3 1794 aa18.83■□□□□ 0.6
CTDP1-206ENST00000590635 GGT6Q6P531 493 aa18.81■□□□□ 0.6
CTDP1-206ENST00000590635 ADGBQ8N7X0 1667 aa18.81■□□□□ 0.6
CTDP1-206ENST00000590635 PLXNC1O60486 1568 aa18.81■□□□□ 0.6
CTDP1-206ENST00000590635 FGD6Q6ZV73 1430 aa18.8■□□□□ 0.6
CTDP1-206ENST00000590635 KIF3BO15066 747 aa18.78■□□□□ 0.6
CTDP1-206ENST00000590635 CEBPAP49715 358 aaPredicted RBP18.78■□□□□ 0.6
CTDP1-206ENST00000590635 MAST1Q9Y2H9 1570 aa18.76■□□□□ 0.59
CTDP1-206ENST00000590635 PTPN23Q9H3S7 1636 aa18.75■□□□□ 0.59
CTDP1-206ENST00000590635 ZMYM3Q14202 1370 aa18.75■□□□□ 0.59
CTDP1-206ENST00000590635 TCOF1Q13428 1488 aaKnown RBP18.75■□□□□ 0.59
CTDP1-206ENST00000590635 ABCC5O15440 1437 aa18.73■□□□□ 0.59
CTDP1-206ENST00000590635 LMTK3Q96Q04 1460 aa18.72■□□□□ 0.59
CTDP1-206ENST00000590635 SHANK2Q9UPX8 1470 aa18.72■□□□□ 0.59
CTDP1-206ENST00000590635 FAM50AQ14320 339 aaKnown RBP18.71■□□□□ 0.59
CTDP1-206ENST00000590635 SETD1BQ9UPS6 1966 aaKnown RBP18.71■□□□□ 0.59
CTDP1-206ENST00000590635 DAPK1P53355 1430 aa18.7■□□□□ 0.58
CTDP1-206ENST00000590635 WASHC2CQ9Y4E1 1318 aa18.7■□□□□ 0.58
CTDP1-206ENST00000590635 NPATQ14207 1427 aa18.69■□□□□ 0.58
CTDP1-206ENST00000590635 UHRF1BP1Q6BDS2 1440 aa18.69■□□□□ 0.58
CTDP1-206ENST00000590635 FAM135AQ9P2D6 1515 aa18.69■□□□□ 0.58
CTDP1-206ENST00000590635 ANKRD30AQ9BXX3 1397 aa18.68■□□□□ 0.58
CTDP1-206ENST00000590635 RRP7BPQ9NSQ0 103 aa18.68■□□□□ 0.58
CTDP1-206ENST00000590635 MROH2AA6NES4 1674 aa18.67■□□□□ 0.58
CTDP1-206ENST00000590635 DUOX2Q9NRD8 1548 aa18.67■□□□□ 0.58
CTDP1-206ENST00000590635 KIF15Q9NS87 1388 aa18.67■□□□□ 0.58
CTDP1-206ENST00000590635 DNMT1P26358 1616 aaKnown RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms