RNA–Protein interactions for RNA: ENST00000590407.1

PDE4A-207, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best)

Gene PDE4A, Length 1,770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-207ENST00000590407 BCANQ96GW7 911 aa17.21■□□□□ 0.35
PDE4A-207ENST00000590407 ABCC5O15440 1437 aa17.2■□□□□ 0.34
PDE4A-207ENST00000590407 POLR1AO95602 1720 aaPredicted RBP17.2■□□□□ 0.34
PDE4A-207ENST00000590407 DISP1Q96F81 1524 aa17.19■□□□□ 0.34
PDE4A-207ENST00000590407 CHIC2Q9UKJ5 165 aa17.19■□□□□ 0.34
PDE4A-207ENST00000590407 CCDC7Q96M83 1385 aa17.18■□□□□ 0.34
PDE4A-207ENST00000590407 L3MBTL2Q969R5 705 aa17.17■□□□□ 0.34
PDE4A-207ENST00000590407 NUP153P49790 1475 aaKnown RBP17.17■□□□□ 0.34
PDE4A-207ENST00000590407 RAPGEF6Q8TEU7 1601 aa17.17■□□□□ 0.34
PDE4A-207ENST00000590407 SPATA31E1Q6ZUB1 1445 aa17.17■□□□□ 0.34
PDE4A-207ENST00000590407 HNRNPUQ00839 825 aaKnown RBP eCLIP17.15■□□□□ 0.34
PDE4A-207ENST00000590407 RBM19Q9Y4C8 960 aaKnown RBP17.13■□□□□ 0.33
PDE4A-207ENST00000590407 ADGRL2O95490 1459 aa17.12■□□□□ 0.33
PDE4A-207ENST00000590407 CDK11AQ9UQ88 783 aaPredicted RBP17.12■□□□□ 0.33
PDE4A-207ENST00000590407 ITSN2Q9NZM3 1697 aa17.12■□□□□ 0.33
PDE4A-207ENST00000590407 ADCY10Q96PN6 1610 aa17.12■□□□□ 0.33
PDE4A-207ENST00000590407 TROQ12816 1431 aaPredicted RBP17.12■□□□□ 0.33
PDE4A-207ENST00000590407 ADGBQ8N7X0 1667 aa17.11■□□□□ 0.33
PDE4A-207ENST00000590407 PRKRIP1Q9H875 184 aaPredicted RBP17.11■□□□□ 0.33
PDE4A-207ENST00000590407 GRIN2AQ12879 1464 aa17.11■□□□□ 0.33
PDE4A-207ENST00000590407 PZPP20742 1482 aa17.1■□□□□ 0.33
PDE4A-207ENST00000590407 MBD5Q9P267 1494 aa17.1■□□□□ 0.33
PDE4A-207ENST00000590407 DNAJC5BQ9UF47 199 aa17.1■□□□□ 0.33
PDE4A-207ENST00000590407 NBPF8Q3BBV2 869 aa17.07■□□□□ 0.32
PDE4A-207ENST00000590407 CROCC2H7BZ55 1655 aa17.07■□□□□ 0.32
PDE4A-207ENST00000590407 ZNF608Q9ULD9 1512 aaPredicted RBP17.07■□□□□ 0.32
PDE4A-207ENST00000590407 ZBED9Q6R2W3 1325 aa17.07■□□□□ 0.32
PDE4A-207ENST00000590407 CAMSAP2Q08AD1 1489 aa17.06■□□□□ 0.32
PDE4A-207ENST00000590407 C11orf95C9JLR9 678 aaPredicted RBP17.06■□□□□ 0.32
PDE4A-207ENST00000590407 MAGI1Q96QZ7 1491 aaPredicted RBP17.05■□□□□ 0.32
PDE4A-207ENST00000590407 ARID4BQ4LE39 1312 aaPredicted RBP17.05■□□□□ 0.32
PDE4A-207ENST00000590407 KIAA1107Q9UPP5 1409 aa17.04■□□□□ 0.32
PDE4A-207ENST00000590407 SLC4A1APQ9BWU0 796 aaKnown RBP17.04■□□□□ 0.32
PDE4A-207ENST00000590407 KIF7Q2M1P5 1343 aa17.04■□□□□ 0.32
PDE4A-207ENST00000590407 GPATCH8Q9UKJ3 1502 aaKnown RBP17.04■□□□□ 0.32
PDE4A-207ENST00000590407 EIF4G3O43432 1585 aaKnown RBP17.03■□□□□ 0.32
PDE4A-207ENST00000590407 FANCIQ9NVI1 1328 aa17.02■□□□□ 0.32
PDE4A-207ENST00000590407 FOXD1Q16676 465 aa17.02■□□□□ 0.31
PDE4A-207ENST00000590407 ZNF644Q9H582 1327 aaPredicted RBP17.01■□□□□ 0.31
PDE4A-207ENST00000590407 PPP4R2Q9NY27 417 aa17.01■□□□□ 0.31
PDE4A-207ENST00000590407 KIF14Q15058 1648 aa17.01■□□□□ 0.31
PDE4A-207ENST00000590407 SHANK2Q9UPX8 1470 aa17.01■□□□□ 0.31
PDE4A-207ENST00000590407 UHRF1BP1Q6BDS2 1440 aa17■□□□□ 0.31
PDE4A-207ENST00000590407 PRG4Q92954 1404 aaPredicted RBP16.99■□□□□ 0.31
PDE4A-207ENST00000590407 CCDC184Q52MB2 194 aa16.99■□□□□ 0.31
PDE4A-207ENST00000590407 MRS2Q9HD23 443 aa16.99■□□□□ 0.31
PDE4A-207ENST00000590407 DHX29Q7Z478 1369 aaKnown RBP16.98■□□□□ 0.31
PDE4A-207ENST00000590407 ANKRD30AQ9BXX3 1397 aa16.98■□□□□ 0.31
PDE4A-207ENST00000590407 KDM5DQ9BY66 1539 aa16.98■□□□□ 0.31
PDE4A-207ENST00000590407 CFDP1Q9UEE9 299 aaPredicted RBP16.97■□□□□ 0.31
PDE4A-207ENST00000590407 ARHGEF12Q9NZN5 1544 aa16.97■□□□□ 0.31
PDE4A-207ENST00000590407 SYNJ2O15056 1496 aa16.97■□□□□ 0.31
PDE4A-207ENST00000590407 CEP170Q5SW79 1584 aa16.96■□□□□ 0.31
PDE4A-207ENST00000590407 KDM5CP41229 1560 aa16.96■□□□□ 0.3
PDE4A-207ENST00000590407 ROCK2O75116 1388 aaKnown RBP16.95■□□□□ 0.3
PDE4A-207ENST00000590407 RALGAPBQ86X10 1494 aa16.95■□□□□ 0.3
PDE4A-207ENST00000590407 NUP160Q12769 1436 aa16.95■□□□□ 0.3
PDE4A-207ENST00000590407 CARMIL2Q6F5E8 1435 aa16.95■□□□□ 0.3
PDE4A-207ENST00000590407 SMG6Q86US8 1419 aaKnown RBP16.94■□□□□ 0.3
PDE4A-207ENST00000590407 ARID3CA6NKF2 412 aa16.94■□□□□ 0.3
PDE4A-207ENST00000590407 PLB1Q6P1J6 1458 aa16.93■□□□□ 0.3
PDE4A-207ENST00000590407 USP47Q96K76 1375 aa16.93■□□□□ 0.3
PDE4A-207ENST00000590407 ANKRD50Q9ULJ7 1429 aa16.93■□□□□ 0.3
PDE4A-207ENST00000590407 BCORL1Q5H9F3 1711 aa16.93■□□□□ 0.3
PDE4A-207ENST00000590407 ABCA8O94911 1581 aa16.92■□□□□ 0.3
PDE4A-207ENST00000590407 ABCC10Q5T3U5 1492 aa16.92■□□□□ 0.3
PDE4A-207ENST00000590407 FAM9BQ8IZU0 186 aa16.9■□□□□ 0.3
PDE4A-207ENST00000590407 CDC42BPAQ5VT25 1732 aa16.9■□□□□ 0.3
PDE4A-207ENST00000590407 PTPRGP23470 1445 aa16.9■□□□□ 0.3
PDE4A-207ENST00000590407 RNF123Q5XPI4 1314 aa16.89■□□□□ 0.29
PDE4A-207ENST00000590407 ARHGEF5Q12774 1597 aa16.89■□□□□ 0.29
PDE4A-207ENST00000590407 KTN1Q86UP2 1357 aaKnown RBP16.88■□□□□ 0.29
PDE4A-207ENST00000590407 PKD2Q13563 968 aa16.87■□□□□ 0.29
PDE4A-207ENST00000590407 IRX6P78412 446 aaPredicted RBP16.87■□□□□ 0.29
PDE4A-207ENST00000590407 C9orf84Q5VXU9 1444 aa16.86■□□□□ 0.29
PDE4A-207ENST00000590407 MSH5O43196 834 aa16.86■□□□□ 0.29
PDE4A-207ENST00000590407 CHMP7Q8WUX9 453 aaPredicted RBP16.84■□□□□ 0.29
PDE4A-207ENST00000590407 JPH4Q96JJ6 628 aa16.83■□□□□ 0.28
PDE4A-207ENST00000590407 NUDCQ9Y266 331 aa16.83■□□□□ 0.28
PDE4A-207ENST00000590407 ATP10BO94823 1461 aa16.83■□□□□ 0.28
PDE4A-207ENST00000590407 PLEKHD1A6NEE1 506 aa16.82■□□□□ 0.28
PDE4A-207ENST00000590407 KIF15Q9NS87 1388 aa16.81■□□□□ 0.28
PDE4A-207ENST00000590407 E9PCH4 1651 aa16.81■□□□□ 0.28
PDE4A-207ENST00000590407 NUP155O75694 1391 aa16.8■□□□□ 0.28
PDE4A-207ENST00000590407 LRPPRCP42704 1394 aaKnown RBP16.8■□□□□ 0.28
PDE4A-207ENST00000590407 PNISRQ8TF01 805 aaKnown RBP16.79■□□□□ 0.28
PDE4A-207ENST00000590407 BRD4O60885 1362 aaPredicted RBP16.78■□□□□ 0.28
PDE4A-207ENST00000590407 ZNF777Q9ULD5 760 aaPredicted RBP16.78■□□□□ 0.28
PDE4A-207ENST00000590407 RSPH4AQ5TD94 716 aa16.77■□□□□ 0.27
PDE4A-207ENST00000590407 RALBP1Q15311 655 aa16.76■□□□□ 0.27
PDE4A-207ENST00000590407 MAST1Q9Y2H9 1570 aa16.75■□□□□ 0.27
PDE4A-207ENST00000590407 CCDC141Q6ZP82 1450 aa16.75■□□□□ 0.27
PDE4A-207ENST00000590407 TSPY4P0CV99 314 aa16.75■□□□□ 0.27
PDE4A-207ENST00000590407 TSPY10P0CW01 314 aa16.75■□□□□ 0.27
PDE4A-207ENST00000590407 CARD11Q9BXL7 1154 aa16.75■□□□□ 0.27
PDE4A-207ENST00000590407 MYT1LQ9UL68 1186 aa16.75■□□□□ 0.27
PDE4A-207ENST00000590407 LAMC1P11047 1609 aa16.75■□□□□ 0.27
PDE4A-207ENST00000590407 ERCC6Q03468 1493 aa16.75■□□□□ 0.27
PDE4A-207ENST00000590407 B4GALNT3Q6L9W6 998 aa16.74■□□□□ 0.27
PDE4A-207ENST00000590407 PREX2Q70Z35 1606 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms