RNA–Protein interactions for RNA: ENST00000590220.1

PIK3C3-213, Transcript of phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

TSL 3

Gene PIK3C3, Length 168 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3-213ENST00000590220 ATP10AO60312 1499 aa10.12□□□□□ -0.79
PIK3C3-213ENST00000590220 NCOA1Q15788 1441 aa10.12□□□□□ -0.79
PIK3C3-213ENST00000590220 C9orf84Q5VXU9 1444 aa10.1□□□□□ -0.79
PIK3C3-213ENST00000590220 CEBPAP49715 358 aaPredicted RBP10.1□□□□□ -0.79
PIK3C3-213ENST00000590220 REREQ9P2R6 1566 aa10.09□□□□□ -0.79
PIK3C3-213ENST00000590220 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.09□□□□□ -0.79
PIK3C3-213ENST00000590220 SUPT5HO00267 1087 aaKnown RBP10.09□□□□□ -0.79
PIK3C3-213ENST00000590220 MLECQ14165 292 aa10.09□□□□□ -0.79
PIK3C3-213ENST00000590220 SAMD9Q5K651 1589 aa10.09□□□□□ -0.79
PIK3C3-213ENST00000590220 UBAP1LF5GYI3 381 aa10.07□□□□□ -0.8
PIK3C3-213ENST00000590220 SUPT6HQ7KZ85 1726 aaKnown RBP10.07□□□□□ -0.8
PIK3C3-213ENST00000590220 NUP153P49790 1475 aaKnown RBP10.06□□□□□ -0.8
PIK3C3-213ENST00000590220 FAM9AQ8IZU1 332 aaPredicted RBP10.06□□□□□ -0.8
PIK3C3-213ENST00000590220 CAMSAP1Q5T5Y3 1602 aa10.06□□□□□ -0.8
PIK3C3-213ENST00000590220 TRAPPC8Q9Y2L5 1435 aa10.06□□□□□ -0.8
PIK3C3-213ENST00000590220 ZNF142P52746 1687 aaPredicted RBP10.06□□□□□ -0.8
PIK3C3-213ENST00000590220 MROH2AA6NES4 1674 aa10.05□□□□□ -0.8
PIK3C3-213ENST00000590220 AGLP35573 1532 aa10.04□□□□□ -0.8
PIK3C3-213ENST00000590220 ARID3CA6NKF2 412 aa10.04□□□□□ -0.8
PIK3C3-213ENST00000590220 KDM5CP41229 1560 aa10.04□□□□□ -0.8
PIK3C3-213ENST00000590220 MYO5CQ9NQX4 1742 aa10.02□□□□□ -0.8
PIK3C3-213ENST00000590220 SCAPERQ9BY12 1400 aa10.02□□□□□ -0.81
PIK3C3-213ENST00000590220 HSPA1LP34931 641 aa10.02□□□□□ -0.81
PIK3C3-213ENST00000590220 PLA2R1Q13018 1463 aa10.02□□□□□ -0.81
PIK3C3-213ENST00000590220 PRXQ9BXM0 1461 aa10.02□□□□□ -0.81
PIK3C3-213ENST00000590220 ZNF335Q9H4Z2 1342 aaPredicted RBP10.02□□□□□ -0.81
PIK3C3-213ENST00000590220 DIP2CQ9Y2E4 1556 aa10.01□□□□□ -0.81
PIK3C3-213ENST00000590220 PLCH2O75038 1416 aa10.01□□□□□ -0.81
PIK3C3-213ENST00000590220 NPATQ14207 1427 aa10□□□□□ -0.81
PIK3C3-213ENST00000590220 TCOF1Q13428 1488 aaKnown RBP10□□□□□ -0.81
PIK3C3-213ENST00000590220 PLEKHD1A6NEE1 506 aa9.99□□□□□ -0.81
PIK3C3-213ENST00000590220 ABCA6Q8N139 1617 aa9.99□□□□□ -0.81
PIK3C3-213ENST00000590220 ALKQ9UM73 1620 aa9.99□□□□□ -0.81
PIK3C3-213ENST00000590220 ZNF518AQ6AHZ1 1483 aa9.98□□□□□ -0.81
PIK3C3-213ENST00000590220 CNTLNQ9NXG0 1405 aa9.98□□□□□ -0.81
PIK3C3-213ENST00000590220 MYO3AQ8NEV4 1616 aa9.97□□□□□ -0.81
PIK3C3-213ENST00000590220 POLR1AO95602 1720 aaPredicted RBP9.97□□□□□ -0.81
PIK3C3-213ENST00000590220 PKD2Q13563 968 aa9.97□□□□□ -0.81
PIK3C3-213ENST00000590220 CPS1P31327 1500 aa9.97□□□□□ -0.81
PIK3C3-213ENST00000590220 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.96□□□□□ -0.82
PIK3C3-213ENST00000590220 HNRNPUL2Q1KMD3 747 aaKnown RBP9.96□□□□□ -0.82
PIK3C3-213ENST00000590220 PHF23Q9BUL5 403 aaPredicted RBP9.96□□□□□ -0.82
PIK3C3-213ENST00000590220 MLH3Q9UHC1 1453 aa9.96□□□□□ -0.82
PIK3C3-213ENST00000590220 TOM1O60784 492 aa9.95□□□□□ -0.82
PIK3C3-213ENST00000590220 CEP170BQ9Y4F5 1589 aaPredicted RBP9.94□□□□□ -0.82
PIK3C3-213ENST00000590220 NCKAP5LQ9HCH0 1330 aa9.94□□□□□ -0.82
PIK3C3-213ENST00000590220 P3H3Q8IVL6 736 aa9.94□□□□□ -0.82
PIK3C3-213ENST00000590220 RGS17Q9UGC6 210 aaPredicted RBP9.94□□□□□ -0.82
PIK3C3-213ENST00000590220 KIDINS220Q9ULH0 1771 aa9.93□□□□□ -0.82
PIK3C3-213ENST00000590220 CDC42BPBQ9Y5S2 1711 aa9.93□□□□□ -0.82
PIK3C3-213ENST00000590220 PTPRKQ15262 1439 aa9.92□□□□□ -0.82
PIK3C3-213ENST00000590220 EFCAB2Q5VUJ9 269 aa9.91□□□□□ -0.82
PIK3C3-213ENST00000590220 CLTCQ00610 1675 aaKnown RBP9.9□□□□□ -0.82
PIK3C3-213ENST00000590220 DNMT1P26358 1616 aaKnown RBP9.9□□□□□ -0.82
PIK3C3-213ENST00000590220 NEURL4Q96JN8 1562 aa9.9□□□□□ -0.82
PIK3C3-213ENST00000590220 PIP4K2BP78356 416 aa9.9□□□□□ -0.82
PIK3C3-213ENST00000590220 SHANK2Q9UPX8 1470 aa9.9□□□□□ -0.83
PIK3C3-213ENST00000590220 ITSN2Q9NZM3 1697 aa9.9□□□□□ -0.83
PIK3C3-213ENST00000590220 ZMYM3Q14202 1370 aa9.89□□□□□ -0.83
PIK3C3-213ENST00000590220 AFAP1Q8N556 730 aa9.89□□□□□ -0.83
PIK3C3-213ENST00000590220 ESF1Q9H501 851 aaKnown RBP9.89□□□□□ -0.83
PIK3C3-213ENST00000590220 PPP6R1Q9UPN7 881 aa9.89□□□□□ -0.83
PIK3C3-213ENST00000590220 VWDEQ8N2E2 1590 aa9.88□□□□□ -0.83
PIK3C3-213ENST00000590220 STRCP1A6NGW2 1772 aa9.88□□□□□ -0.83
PIK3C3-213ENST00000590220 SCAF1Q9H7N4 1312 aaKnown RBP9.87□□□□□ -0.83
PIK3C3-213ENST00000590220 KIF14Q15058 1648 aa9.87□□□□□ -0.83
PIK3C3-213ENST00000590220 SETD1AO15047 1707 aaKnown RBP9.87□□□□□ -0.83
PIK3C3-213ENST00000590220 CDK13Q14004 1512 aaKnown RBP9.86□□□□□ -0.83
PIK3C3-213ENST00000590220 RNF17Q9BXT8 1623 aaKnown RBP9.85□□□□□ -0.83
PIK3C3-213ENST00000590220 ABCC1P33527 1531 aa9.85□□□□□ -0.83
PIK3C3-213ENST00000590220 A2ML1A8K2U0 1454 aa9.85□□□□□ -0.83
PIK3C3-213ENST00000590220 ARHGAP5Q13017 1502 aa9.84□□□□□ -0.83
PIK3C3-213ENST00000590220 DEPDC5O75140 1603 aa9.84□□□□□ -0.83
PIK3C3-213ENST00000590220 PREX2Q70Z35 1606 aa9.84□□□□□ -0.83
PIK3C3-213ENST00000590220 XIRP1Q702N8 1843 aaKnown RBP9.84□□□□□ -0.83
PIK3C3-213ENST00000590220 SYNMO15061 1565 aa9.84□□□□□ -0.83
PIK3C3-213ENST00000590220 PLXNC1O60486 1568 aa9.83□□□□□ -0.84
PIK3C3-213ENST00000590220 POTEAQ6S8J7 498 aa9.82□□□□□ -0.84
PIK3C3-213ENST00000590220 MED14O60244 1454 aa9.82□□□□□ -0.84
PIK3C3-213ENST00000590220 CDC42BPAQ5VT25 1732 aa9.81□□□□□ -0.84
PIK3C3-213ENST00000590220 LRRIQ1Q96JM4 1722 aa9.81□□□□□ -0.84
PIK3C3-213ENST00000590220 IQGAP1P46940 1657 aa9.8□□□□□ -0.84
PIK3C3-213ENST00000590220 LRRC7Q96NW7 1537 aa9.8□□□□□ -0.84
PIK3C3-213ENST00000590220 SAMD9LQ8IVG5 1584 aa9.8□□□□□ -0.84
PIK3C3-213ENST00000590220 TROQ12816 1431 aaPredicted RBP9.78□□□□□ -0.84
PIK3C3-213ENST00000590220 ADGBQ8N7X0 1667 aa9.77□□□□□ -0.84
PIK3C3-213ENST00000590220 MYT1LQ9UL68 1186 aa9.77□□□□□ -0.85
PIK3C3-213ENST00000590220 ZC3H13Q5T200 1668 aaKnown RBP9.77□□□□□ -0.85
PIK3C3-213ENST00000590220 INO80Q9ULG1 1556 aaPredicted RBP9.76□□□□□ -0.85
PIK3C3-213ENST00000590220 CDK11AQ9UQ88 783 aaPredicted RBP9.75□□□□□ -0.85
PIK3C3-213ENST00000590220 SRCAPQ6ZRS2 3230 aa9.75□□□□□ -0.85
PIK3C3-213ENST00000590220 UPF1Q92900 1129 aaKnown RBP eCLIP9.74□□□□□ -0.85
PIK3C3-213ENST00000590220 NPHP4O75161 1426 aaPredicted RBP9.73□□□□□ -0.85
PIK3C3-213ENST00000590220 FAM135BQ49AJ0 1406 aa9.73□□□□□ -0.85
PIK3C3-213ENST00000590220 ATP7AQ04656 1500 aa9.73□□□□□ -0.85
PIK3C3-213ENST00000590220 FAM135AQ9P2D6 1515 aa9.73□□□□□ -0.85
PIK3C3-213ENST00000590220 ANKLE2Q86XL3 938 aa9.73□□□□□ -0.85
PIK3C3-213ENST00000590220 CLIP1P30622 1438 aa9.73□□□□□ -0.85
PIK3C3-213ENST00000590220 A2MP01023 1474 aa9.72□□□□□ -0.85
PIK3C3-213ENST00000590220 CSRNP3Q8WYN3 585 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms