RNA–Protein interactions for RNA: ENST00000590220.1

PIK3C3-213, Transcript of phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

TSL 3

Gene PIK3C3, Length 168 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3-213ENST00000590220 NISCHQ9Y2I1 1504 aa15.17■□□□□ 0.02
PIK3C3-213ENST00000590220 ABCC9O60706 1549 aa14.31□□□□□ -0.12
PIK3C3-213ENST00000590220 CCDC180Q9P1Z9 1646 aa13.98□□□□□ -0.17
PIK3C3-213ENST00000590220 DNAJC5BQ9UF47 199 aa13.95□□□□□ -0.18
PIK3C3-213ENST00000590220 RB1CC1Q8TDY2 1594 aa13.49□□□□□ -0.25
PIK3C3-213ENST00000590220 UNC13AQ9UPW8 1703 aa13.32□□□□□ -0.28
PIK3C3-213ENST00000590220 NACADO15069 1562 aa13.28□□□□□ -0.28
PIK3C3-213ENST00000590220 DNAJC5Q9H3Z4 198 aa13.27□□□□□ -0.29
PIK3C3-213ENST00000590220 PABPN1Q86U42 306 aaKnown RBP eCLIP13.16□□□□□ -0.3
PIK3C3-213ENST00000590220 BICRAQ9NZM4 1560 aa13.15□□□□□ -0.3
PIK3C3-213ENST00000590220 CC2D2AQ9P2K1 1620 aa13.01□□□□□ -0.33
PIK3C3-213ENST00000590220 CECR2Q9BXF3 1484 aa12.98□□□□□ -0.33
PIK3C3-213ENST00000590220 MYO15BQ96JP2 1530 aa12.98□□□□□ -0.33
PIK3C3-213ENST00000590220 SHROOM4Q9ULL8 1493 aa12.95□□□□□ -0.34
PIK3C3-213ENST00000590220 EIF4G1Q04637 1599 aaKnown RBP12.84□□□□□ -0.35
PIK3C3-213ENST00000590220 DCAF8L2P0C7V8 631 aa12.8□□□□□ -0.36
PIK3C3-213ENST00000590220 CUX2O14529 1486 aa12.67□□□□□ -0.38
PIK3C3-213ENST00000590220 DCAF1Q9Y4B6 1507 aa12.58□□□□□ -0.4
PIK3C3-213ENST00000590220 SCRIBQ14160 1630 aa12.52□□□□□ -0.4
PIK3C3-213ENST00000590220 ZCCHC6Q5VYS8 1495 aaKnown RBP12.46□□□□□ -0.42
PIK3C3-213ENST00000590220 ERCC6Q03468 1493 aa12.38□□□□□ -0.43
PIK3C3-213ENST00000590220 TRIM41Q8WV44 630 aa12.28□□□□□ -0.44
PIK3C3-213ENST00000590220 THOC2Q8NI27 1593 aaKnown RBP12.26□□□□□ -0.45
PIK3C3-213ENST00000590220 NCAPD3P42695 1498 aa12.25□□□□□ -0.45
PIK3C3-213ENST00000590220 NESP48681 1621 aa12.16□□□□□ -0.46
PIK3C3-213ENST00000590220 HMGXB3Q12766 1538 aa12.13□□□□□ -0.47
PIK3C3-213ENST00000590220 KIF21AQ7Z4S6 1674 aa12.1□□□□□ -0.47
PIK3C3-213ENST00000590220 ATAD2BQ9ULI0 1458 aa12.09□□□□□ -0.47
PIK3C3-213ENST00000590220 LAMC3Q9Y6N6 1575 aa12.09□□□□□ -0.47
PIK3C3-213ENST00000590220 SMARCA2P51531 1590 aa12.06□□□□□ -0.48
PIK3C3-213ENST00000590220 BAZ1AQ9NRL2 1556 aaPredicted RBP12.01□□□□□ -0.49
PIK3C3-213ENST00000590220 SMARCA4P51532 1647 aa11.98□□□□□ -0.49
PIK3C3-213ENST00000590220 PDS5BQ9NTI5 1447 aa11.95□□□□□ -0.5
PIK3C3-213ENST00000590220 WDR62O43379 1518 aa11.94□□□□□ -0.5
PIK3C3-213ENST00000590220 PEG3Q9GZU2 1588 aa11.93□□□□□ -0.5
PIK3C3-213ENST00000590220 BAZ1BQ9UIG0 1483 aaKnown RBP11.91□□□□□ -0.5
PIK3C3-213ENST00000590220 OSCARQ8IYS5 282 aa11.91□□□□□ -0.5
PIK3C3-213ENST00000590220 RIMBP3CA6NJZ7 1639 aa11.9□□□□□ -0.5
PIK3C3-213ENST00000590220 RIMBP3BA6NNM3 1639 aa11.9□□□□□ -0.5
PIK3C3-213ENST00000590220 RIMBP3Q9UFD9 1639 aa11.9□□□□□ -0.5
PIK3C3-213ENST00000590220 MRC2Q9UBG0 1479 aa11.89□□□□□ -0.51
PIK3C3-213ENST00000590220 CADPSQ9ULU8 1353 aa11.79□□□□□ -0.52
PIK3C3-213ENST00000590220 ARHGEF11O15085 1522 aa11.77□□□□□ -0.52
PIK3C3-213ENST00000590220 CEP164Q9UPV0 1460 aa11.72□□□□□ -0.53
PIK3C3-213ENST00000590220 AEBP2Q6ZN18 517 aaPredicted RBP11.7□□□□□ -0.54
PIK3C3-213ENST00000590220 MROH2BQ7Z745 1585 aa11.65□□□□□ -0.54
PIK3C3-213ENST00000590220 FANCD2Q9BXW9 1451 aa11.64□□□□□ -0.55
PIK3C3-213ENST00000590220 URB2Q14146 1524 aaKnown RBP11.61□□□□□ -0.55
PIK3C3-213ENST00000590220 TRHP20396 242 aaPredicted RBP11.61□□□□□ -0.55
PIK3C3-213ENST00000590220 CYB5RLQ6IPT4 315 aa11.61□□□□□ -0.55
PIK3C3-213ENST00000590220 ARAP1Q96P48 1450 aa11.61□□□□□ -0.55
PIK3C3-213ENST00000590220 CFTRP13569 1480 aa11.58□□□□□ -0.56
PIK3C3-213ENST00000590220 PRDM2Q13029 1718 aa11.58□□□□□ -0.56
PIK3C3-213ENST00000590220 CHD1O14646 1710 aa11.57□□□□□ -0.56
PIK3C3-213ENST00000590220 RSF1Q96T23 1441 aaPredicted RBP11.54□□□□□ -0.56
PIK3C3-213ENST00000590220 ZNF608Q9ULD9 1512 aaPredicted RBP11.53□□□□□ -0.56
PIK3C3-213ENST00000590220 IFT140Q96RY7 1462 aa11.52□□□□□ -0.56
PIK3C3-213ENST00000590220 WIZO95785 1651 aa11.52□□□□□ -0.57
PIK3C3-213ENST00000590220 EIF4G3O43432 1585 aaKnown RBP11.5□□□□□ -0.57
PIK3C3-213ENST00000590220 TARBP1Q13395 1621 aaKnown RBP11.41□□□□□ -0.58
PIK3C3-213ENST00000590220 CLASP1Q7Z460 1538 aa11.4□□□□□ -0.59
PIK3C3-213ENST00000590220 TOPBP1Q92547 1522 aa11.39□□□□□ -0.59
PIK3C3-213ENST00000590220 ABCC8Q09428 1581 aa11.37□□□□□ -0.59
PIK3C3-213ENST00000590220 ILDR1Q86SU0 546 aaPredicted RBP11.35□□□□□ -0.59
PIK3C3-213ENST00000590220 AQRO60306 1485 aaKnown RBP eCLIP11.33□□□□□ -0.6
PIK3C3-213ENST00000590220 DNMBPQ6XZF7 1577 aa11.33□□□□□ -0.6
PIK3C3-213ENST00000590220 TOP2AP11388 1531 aaKnown RBP11.32□□□□□ -0.6
PIK3C3-213ENST00000590220 KIF13AQ9H1H9 1805 aa11.31□□□□□ -0.6
PIK3C3-213ENST00000590220 SYNJ1O43426 1573 aa11.3□□□□□ -0.6
PIK3C3-213ENST00000590220 WDR97A6NE52 1622 aa11.29□□□□□ -0.6
PIK3C3-213ENST00000590220 FBLN2P98095 1184 aa11.26□□□□□ -0.61
PIK3C3-213ENST00000590220 GAPVD1Q14C86 1478 aa11.25□□□□□ -0.61
PIK3C3-213ENST00000590220 POLA1P09884 1462 aaPredicted RBP11.23□□□□□ -0.61
PIK3C3-213ENST00000590220 SNAPC4Q5SXM2 1469 aa11.21□□□□□ -0.61
PIK3C3-213ENST00000590220 MAGI1Q96QZ7 1491 aaPredicted RBP11.21□□□□□ -0.61
PIK3C3-213ENST00000590220 SYNJ2O15056 1496 aa11.18□□□□□ -0.62
PIK3C3-213ENST00000590220 CCDC88BA6NC98 1476 aa11.16□□□□□ -0.62
PIK3C3-213ENST00000590220 RAD54L2Q9Y4B4 1467 aa11.15□□□□□ -0.62
PIK3C3-213ENST00000590220 KDM4FA0A1W2PPD8 638 aa11.15□□□□□ -0.62
PIK3C3-213ENST00000590220 CHMP7Q8WUX9 453 aaPredicted RBP11.15□□□□□ -0.62
PIK3C3-213ENST00000590220 TDRD9Q8NDG6 1382 aaKnown RBP11.15□□□□□ -0.63
PIK3C3-213ENST00000590220 PBRM1Q86U86 1689 aa11.14□□□□□ -0.63
PIK3C3-213ENST00000590220 SOGA1O94964 1423 aa11.13□□□□□ -0.63
PIK3C3-213ENST00000590220 GRIN2BQ13224 1484 aa11.12□□□□□ -0.63
PIK3C3-213ENST00000590220 ERCC6L2Q5T890 1561 aa11.11□□□□□ -0.63
PIK3C3-213ENST00000590220 SHROOM2Q13796 1616 aa11.09□□□□□ -0.63
PIK3C3-213ENST00000590220 CEP170Q5SW79 1584 aa11.07□□□□□ -0.64
PIK3C3-213ENST00000590220 FGD5Q6ZNL6 1462 aa11.06□□□□□ -0.64
PIK3C3-213ENST00000590220 KDM6BO15054 1643 aa11.06□□□□□ -0.64
PIK3C3-213ENST00000590220 ABCC10Q5T3U5 1492 aa11.05□□□□□ -0.64
PIK3C3-213ENST00000590220 DIP2BQ9P265 1576 aa11.03□□□□□ -0.64
PIK3C3-213ENST00000590220 ABCA5Q8WWZ7 1642 aa11.02□□□□□ -0.64
PIK3C3-213ENST00000590220 MAPKBP1O60336 1514 aa11.02□□□□□ -0.65
PIK3C3-213ENST00000590220 NUP160Q12769 1436 aa11.01□□□□□ -0.65
PIK3C3-213ENST00000590220 TSPOAP1O95153 1857 aa11□□□□□ -0.65
PIK3C3-213ENST00000590220 HECW2Q9P2P5 1572 aa10.99□□□□□ -0.65
PIK3C3-213ENST00000590220 GRIN2AQ12879 1464 aa10.99□□□□□ -0.65
PIK3C3-213ENST00000590220 CUX1P39880 1505 aa10.99□□□□□ -0.65
PIK3C3-213ENST00000590220 FAM69CQ0P6D2 419 aa10.95□□□□□ -0.66
PIK3C3-213ENST00000590220 ADAMTS12P58397 1594 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms