RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 POGZQ7Z3K3 1410 aa29.47■■■□□ 2.31
H3F3B-209ENST00000589949 CASKIN1Q8WXD9 1431 aa29.47■■■□□ 2.31
H3F3B-209ENST00000589949 MYO5CQ9NQX4 1742 aa29.47■■■□□ 2.31
H3F3B-209ENST00000589949 MADDQ8WXG6 1647 aa29.46■■■□□ 2.31
H3F3B-209ENST00000589949 EFCAB2Q5VUJ9 269 aa29.45■■■□□ 2.31
H3F3B-209ENST00000589949 ZFYVE16Q7Z3T8 1539 aa29.45■■■□□ 2.3
H3F3B-209ENST00000589949 MAGI2Q86UL8 1455 aa29.41■■■□□ 2.3
H3F3B-209ENST00000589949 CLIP1P30622 1438 aa29.4■■■□□ 2.3
H3F3B-209ENST00000589949 CCDC18Q5T9S5 1454 aa29.37■■■□□ 2.29
H3F3B-209ENST00000589949 ARHGAP5Q13017 1502 aa29.37■■■□□ 2.29
H3F3B-209ENST00000589949 FYCO1Q9BQS8 1478 aa29.34■■■□□ 2.29
H3F3B-209ENST00000589949 CDC42BPBQ9Y5S2 1711 aa29.34■■■□□ 2.29
H3F3B-209ENST00000589949 AFAP1Q8N556 730 aa29.33■■■□□ 2.29
H3F3B-209ENST00000589949 RIMS1Q86UR5 1692 aaKnown RBP29.33■■■□□ 2.29
H3F3B-209ENST00000589949 ATP10AO60312 1499 aa29.29■■■□□ 2.28
H3F3B-209ENST00000589949 KDM5CP41229 1560 aa29.28■■■□□ 2.28
H3F3B-209ENST00000589949 MLECQ14165 292 aa29.28■■■□□ 2.28
H3F3B-209ENST00000589949 ARHGEF12Q9NZN5 1544 aa29.28■■■□□ 2.28
H3F3B-209ENST00000589949 ZNF518AQ6AHZ1 1483 aa29.28■■■□□ 2.28
H3F3B-209ENST00000589949 PREX2Q70Z35 1606 aa29.27■■■□□ 2.28
H3F3B-209ENST00000589949 ILDR1Q86SU0 546 aaPredicted RBP29.26■■■□□ 2.27
H3F3B-209ENST00000589949 C9orf84Q5VXU9 1444 aa29.25■■■□□ 2.27
H3F3B-209ENST00000589949 LMTK3Q96Q04 1460 aa29.23■■■□□ 2.27
H3F3B-209ENST00000589949 TRAPPC8Q9Y2L5 1435 aa29.23■■■□□ 2.27
H3F3B-209ENST00000589949 CDC42BPAQ5VT25 1732 aa29.22■■■□□ 2.27
H3F3B-209ENST00000589949 ABCC1P33527 1531 aa29.21■■■□□ 2.27
H3F3B-209ENST00000589949 PLPPR3Q6T4P5 718 aa29.21■■■□□ 2.27
H3F3B-209ENST00000589949 DIP2CQ9Y2E4 1556 aa29.18■■■□□ 2.26
H3F3B-209ENST00000589949 FER1L4A9Z1Z3 1794 aa29.16■■■□□ 2.26
H3F3B-209ENST00000589949 MLH3Q9UHC1 1453 aa29.16■■■□□ 2.26
H3F3B-209ENST00000589949 ITSN2Q9NZM3 1697 aa29.15■■■□□ 2.26
H3F3B-209ENST00000589949 GPATCH8Q9UKJ3 1502 aaKnown RBP29.15■■■□□ 2.26
H3F3B-209ENST00000589949 ABCA6Q8N139 1617 aa29.15■■■□□ 2.26
H3F3B-209ENST00000589949 MYT1LQ9UL68 1186 aa29.12■■■□□ 2.25
H3F3B-209ENST00000589949 SAMD9LQ8IVG5 1584 aa29.11■■■□□ 2.25
H3F3B-209ENST00000589949 HSPA2P54652 639 aa29.11■■■□□ 2.25
H3F3B-209ENST00000589949 ZNF777Q9ULD5 760 aaPredicted RBP29.1■■■□□ 2.25
H3F3B-209ENST00000589949 CEP162Q5TB80 1403 aa29.1■■■□□ 2.25
H3F3B-209ENST00000589949 REREQ9P2R6 1566 aa29.09■■■□□ 2.25
H3F3B-209ENST00000589949 CEBPAP49715 358 aaPredicted RBP29.08■■■□□ 2.25
H3F3B-209ENST00000589949 KIDINS220Q9ULH0 1771 aa29.07■■■□□ 2.24
H3F3B-209ENST00000589949 SYCP2Q9BX26 1530 aa29.04■■■□□ 2.24
H3F3B-209ENST00000589949 HNRNPMP52272 730 aaKnown RBP eCLIP29.04■■■□□ 2.24
H3F3B-209ENST00000589949 MTUS2Q5JR59 1369 aa29.03■■■□□ 2.24
H3F3B-209ENST00000589949 CCNB3Q8WWL7 1395 aa29.01■■■□□ 2.23
H3F3B-209ENST00000589949 AGLP35573 1532 aa29■■■□□ 2.23
H3F3B-209ENST00000589949 CFDP1Q9UEE9 299 aaPredicted RBP29■■■□□ 2.23
H3F3B-209ENST00000589949 LOC105371045A0A1W2PR82 267 aa28.98■■■□□ 2.23
H3F3B-209ENST00000589949 KIAA1107Q9UPP5 1409 aa28.97■■■□□ 2.23
H3F3B-209ENST00000589949 ZNF644Q9H582 1327 aaPredicted RBP28.96■■■□□ 2.23
H3F3B-209ENST00000589949 TIAM1Q13009 1591 aa28.95■■■□□ 2.22
H3F3B-209ENST00000589949 SPAG9O60271 1321 aaKnown RBP28.94■■■□□ 2.22
H3F3B-209ENST00000589949 EHBP1L1Q8N3D4 1523 aa28.94■■■□□ 2.22
H3F3B-209ENST00000589949 PLEKHH2Q8IVE3 1493 aa28.91■■■□□ 2.22
H3F3B-209ENST00000589949 PREX1Q8TCU6 1659 aa28.89■■■□□ 2.21
H3F3B-209ENST00000589949 ATP7AQ04656 1500 aa28.89■■■□□ 2.21
H3F3B-209ENST00000589949 INO80Q9ULG1 1556 aaPredicted RBP28.88■■■□□ 2.21
H3F3B-209ENST00000589949 C3P01024 1663 aa28.88■■■□□ 2.21
H3F3B-209ENST00000589949 MBD5Q9P267 1494 aa28.86■■■□□ 2.21
H3F3B-209ENST00000589949 SUPT6HQ7KZ85 1726 aaKnown RBP28.83■■■□□ 2.21
H3F3B-209ENST00000589949 FBXO41Q8TF61 875 aa28.82■■■□□ 2.2
H3F3B-209ENST00000589949 PLXNC1O60486 1568 aa28.82■■■□□ 2.2
H3F3B-209ENST00000589949 NCOA2Q15596 1464 aa28.81■■■□□ 2.2
H3F3B-209ENST00000589949 A2MP01023 1474 aa28.8■■■□□ 2.2
H3F3B-209ENST00000589949 UHRF1BP1Q6BDS2 1440 aa28.79■■■□□ 2.2
H3F3B-209ENST00000589949 ESF1Q9H501 851 aaKnown RBP28.79■■■□□ 2.2
H3F3B-209ENST00000589949 SETD1BQ9UPS6 1966 aaKnown RBP28.78■■■□□ 2.2
H3F3B-209ENST00000589949 VPS8Q8N3P4 1428 aa28.77■■■□□ 2.2
H3F3B-209ENST00000589949 CNTLNQ9NXG0 1405 aa28.77■■■□□ 2.2
H3F3B-209ENST00000589949 STRCQ7RTU9 1775 aa28.76■■■□□ 2.19
H3F3B-209ENST00000589949 ZMYM3Q14202 1370 aa28.73■■■□□ 2.19
H3F3B-209ENST00000589949 CAMSAP2Q08AD1 1489 aa28.71■■■□□ 2.19
H3F3B-209ENST00000589949 MROH2AA6NES4 1674 aa28.7■■■□□ 2.19
H3F3B-209ENST00000589949 LRRC9Q6ZRR7 1453 aa28.7■■■□□ 2.18
H3F3B-209ENST00000589949 RTEL1-TNFRSF6BF6WH68 1400 aa28.69■■■□□ 2.18
H3F3B-209ENST00000589949 KANK4Q5T7N3 995 aaPredicted RBP28.69■■■□□ 2.18
H3F3B-209ENST00000589949 GGT6Q6P531 493 aa28.69■■■□□ 2.18
H3F3B-209ENST00000589949 ADGBQ8N7X0 1667 aa28.69■■■□□ 2.18
H3F3B-209ENST00000589949 CLTCQ00610 1675 aaKnown RBP28.67■■■□□ 2.18
H3F3B-209ENST00000589949 NPATQ14207 1427 aa28.66■■■□□ 2.18
H3F3B-209ENST00000589949 CCDC141Q6ZP82 1450 aa28.66■■■□□ 2.18
H3F3B-209ENST00000589949 DHX29Q7Z478 1369 aaKnown RBP28.64■■■□□ 2.18
H3F3B-209ENST00000589949 CERKQ8TCT0 537 aa28.64■■■□□ 2.18
H3F3B-209ENST00000589949 PTPRKQ15262 1439 aa28.6■■■□□ 2.17
H3F3B-209ENST00000589949 MAP3K1Q13233 1512 aa28.59■■■□□ 2.17
H3F3B-209ENST00000589949 DMRT2Q9Y5R5 561 aa28.58■■■□□ 2.17
H3F3B-209ENST00000589949 RSPH4AQ5TD94 716 aa28.57■■■□□ 2.16
H3F3B-209ENST00000589949 NCOA1Q15788 1441 aa28.57■■■□□ 2.16
H3F3B-209ENST00000589949 ARHGEF5Q12774 1597 aa28.57■■■□□ 2.16
H3F3B-209ENST00000589949 PPP6R1Q9UPN7 881 aa28.56■■■□□ 2.16
H3F3B-209ENST00000589949 KIF3BO15066 747 aa28.55■■■□□ 2.16
H3F3B-209ENST00000589949 PTPRTO14522 1441 aa28.54■■■□□ 2.16
H3F3B-209ENST00000589949 CAMSAP1Q5T5Y3 1602 aa28.53■■■□□ 2.16
H3F3B-209ENST00000589949 MYO3AQ8NEV4 1616 aa28.51■■■□□ 2.15
H3F3B-209ENST00000589949 MYOM3Q5VTT5 1437 aa28.49■■■□□ 2.15
H3F3B-209ENST00000589949 TSPY4P0CV99 314 aa28.48■■■□□ 2.15
H3F3B-209ENST00000589949 TSPY10P0CW01 314 aa28.48■■■□□ 2.15
H3F3B-209ENST00000589949 ZNF142P52746 1687 aaPredicted RBP28.47■■■□□ 2.15
H3F3B-209ENST00000589949 NCKAP5LQ9HCH0 1330 aa28.46■■■□□ 2.15
H3F3B-209ENST00000589949 CEP170BQ9Y4F5 1589 aaPredicted RBP28.46■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms