RNA–Protein interactions for RNA: ENST00000589428.5

R3HDM4-204, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,704 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-204ENST00000589428 KANK4Q5T7N3 995 aaPredicted RBP33.12■■■□□ 2.89
R3HDM4-204ENST00000589428 NCOA2Q15596 1464 aa33.11■■■□□ 2.89
R3HDM4-204ENST00000589428 CDC42BPBQ9Y5S2 1711 aa33.11■■■□□ 2.89
R3HDM4-204ENST00000589428 AKNAQ7Z591 1439 aa33.11■■■□□ 2.89
R3HDM4-204ENST00000589428 EFCAB2Q5VUJ9 269 aa33.11■■■□□ 2.89
R3HDM4-204ENST00000589428 COL17A1Q9UMD9 1497 aaPredicted RBP33.1■■■□□ 2.89
R3HDM4-204ENST00000589428 GPATCH8Q9UKJ3 1502 aaKnown RBP33.09■■■□□ 2.89
R3HDM4-204ENST00000589428 ITSN2Q9NZM3 1697 aa33.06■■■□□ 2.88
R3HDM4-204ENST00000589428 ADGRL1O94910 1474 aa33.04■■■□□ 2.88
R3HDM4-204ENST00000589428 CFDP1Q9UEE9 299 aaPredicted RBP32.99■■■□□ 2.87
R3HDM4-204ENST00000589428 DENND4BO75064 1496 aaPredicted RBP32.99■■■□□ 2.87
R3HDM4-204ENST00000589428 SCAPERQ9BY12 1400 aa32.96■■■□□ 2.87
R3HDM4-204ENST00000589428 ZNF777Q9ULD5 760 aaPredicted RBP32.94■■■□□ 2.86
R3HDM4-204ENST00000589428 ABCC1P33527 1531 aa32.94■■■□□ 2.86
R3HDM4-204ENST00000589428 PPARGC1BQ86YN6 1023 aaKnown RBP32.94■■■□□ 2.86
R3HDM4-204ENST00000589428 RAPGEF3O95398 923 aa32.93■■■□□ 2.86
R3HDM4-204ENST00000589428 SAMD9LQ8IVG5 1584 aa32.93■■■□□ 2.86
R3HDM4-204ENST00000589428 FRMPD1Q5SYB0 1578 aa32.92■■■□□ 2.86
R3HDM4-204ENST00000589428 RICTORQ6R327 1708 aa32.91■■■□□ 2.86
R3HDM4-204ENST00000589428 POGZQ7Z3K3 1410 aa32.9■■■□□ 2.86
R3HDM4-204ENST00000589428 PLEKHH2Q8IVE3 1493 aa32.88■■■□□ 2.85
R3HDM4-204ENST00000589428 MYOM3Q5VTT5 1437 aa32.87■■■□□ 2.85
R3HDM4-204ENST00000589428 ZNF518AQ6AHZ1 1483 aa32.85■■■□□ 2.85
R3HDM4-204ENST00000589428 SYCP2Q9BX26 1530 aa32.84■■■□□ 2.85
R3HDM4-204ENST00000589428 ZMYM4Q5VZL5 1548 aa32.82■■■□□ 2.84
R3HDM4-204ENST00000589428 ARHGEF12Q9NZN5 1544 aa32.82■■■□□ 2.84
R3HDM4-204ENST00000589428 KIAA1107Q9UPP5 1409 aa32.82■■■□□ 2.84
R3HDM4-204ENST00000589428 MIA2Q96PC5 1412 aa32.8■■■□□ 2.84
R3HDM4-204ENST00000589428 CAMSAP2Q08AD1 1489 aa32.8■■■□□ 2.84
R3HDM4-204ENST00000589428 ZNF644Q9H582 1327 aaPredicted RBP32.78■■■□□ 2.84
R3HDM4-204ENST00000589428 KDM5CP41229 1560 aa32.77■■■□□ 2.84
R3HDM4-204ENST00000589428 TRAPPC8Q9Y2L5 1435 aa32.77■■■□□ 2.84
R3HDM4-204ENST00000589428 HNRNPMP52272 730 aaKnown RBP eCLIP32.74■■■□□ 2.83
R3HDM4-204ENST00000589428 AFAP1Q8N556 730 aa32.74■■■□□ 2.83
R3HDM4-204ENST00000589428 MAGI2Q86UL8 1455 aa32.74■■■□□ 2.83
R3HDM4-204ENST00000589428 ARHGEF40Q8TER5 1519 aa32.72■■■□□ 2.83
R3HDM4-204ENST00000589428 FGD6Q6ZV73 1430 aa32.72■■■□□ 2.83
R3HDM4-204ENST00000589428 ZFYVE16Q7Z3T8 1539 aa32.71■■■□□ 2.83
R3HDM4-204ENST00000589428 HECW2Q9P2P5 1572 aa32.71■■■□□ 2.83
R3HDM4-204ENST00000589428 MBD5Q9P267 1494 aa32.69■■■□□ 2.82
R3HDM4-204ENST00000589428 PTPN23Q9H3S7 1636 aa32.68■■■□□ 2.82
R3HDM4-204ENST00000589428 MYT1LQ9UL68 1186 aa32.67■■■□□ 2.82
R3HDM4-204ENST00000589428 MLH3Q9UHC1 1453 aa32.65■■■□□ 2.82
R3HDM4-204ENST00000589428 YEATS2Q9ULM3 1422 aa32.65■■■□□ 2.82
R3HDM4-204ENST00000589428 CCDC141Q6ZP82 1450 aa32.65■■■□□ 2.82
R3HDM4-204ENST00000589428 ARHGEF5Q12774 1597 aa32.64■■■□□ 2.82
R3HDM4-204ENST00000589428 SPAG9O60271 1321 aaKnown RBP32.62■■■□□ 2.81
R3HDM4-204ENST00000589428 RSPH4AQ5TD94 716 aa32.61■■■□□ 2.81
R3HDM4-204ENST00000589428 TCOF1Q13428 1488 aaKnown RBP32.61■■■□□ 2.81
R3HDM4-204ENST00000589428 INO80Q9ULG1 1556 aaPredicted RBP32.57■■■□□ 2.81
R3HDM4-204ENST00000589428 ATP7AQ04656 1500 aa32.57■■■□□ 2.8
R3HDM4-204ENST00000589428 KIDINS220Q9ULH0 1771 aa32.57■■■□□ 2.8
R3HDM4-204ENST00000589428 ABCA6Q8N139 1617 aa32.55■■■□□ 2.8
R3HDM4-204ENST00000589428 DIP2CQ9Y2E4 1556 aa32.55■■■□□ 2.8
R3HDM4-204ENST00000589428 ATP10AO60312 1499 aa32.54■■■□□ 2.8
R3HDM4-204ENST00000589428 C9orf84Q5VXU9 1444 aa32.53■■■□□ 2.8
R3HDM4-204ENST00000589428 FAM50AQ14320 339 aaKnown RBP32.51■■■□□ 2.8
R3HDM4-204ENST00000589428 TSPY4P0CV99 314 aa32.51■■■□□ 2.79
R3HDM4-204ENST00000589428 TSPY10P0CW01 314 aa32.51■■■□□ 2.79
R3HDM4-204ENST00000589428 RTEL1-TNFRSF6BF6WH68 1400 aa32.5■■■□□ 2.79
R3HDM4-204ENST00000589428 DNMT1P26358 1616 aaKnown RBP32.49■■■□□ 2.79
R3HDM4-204ENST00000589428 ARID4BQ4LE39 1312 aaPredicted RBP32.46■■■□□ 2.79
R3HDM4-204ENST00000589428 CROCC2H7BZ55 1655 aa32.46■■■□□ 2.79
R3HDM4-204ENST00000589428 REREQ9P2R6 1566 aa32.45■■■□□ 2.79
R3HDM4-204ENST00000589428 MAST1Q9Y2H9 1570 aa32.45■■■□□ 2.79
R3HDM4-204ENST00000589428 DAPK1P53355 1430 aa32.45■■■□□ 2.79
R3HDM4-204ENST00000589428 ABCC5O15440 1437 aa32.44■■■□□ 2.78
R3HDM4-204ENST00000589428 SHANK2Q9UPX8 1470 aa32.44■■■□□ 2.78
R3HDM4-204ENST00000589428 TRIM26Q12899 539 aaPredicted RBP32.43■■■□□ 2.78
R3HDM4-204ENST00000589428 ADGBQ8N7X0 1667 aa32.41■■■□□ 2.78
R3HDM4-204ENST00000589428 SIGLEC1Q9BZZ2 1709 aa32.4■■■□□ 2.78
R3HDM4-204ENST00000589428 RRBP1Q9P2E9 1410 aaKnown RBP32.39■■■□□ 2.78
R3HDM4-204ENST00000589428 A2MP01023 1474 aa32.37■■■□□ 2.77
R3HDM4-204ENST00000589428 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.37■■■□□ 2.771e-6■■■■□ 20.2
R3HDM4-204ENST00000589428 PLXNC1O60486 1568 aa32.35■■■□□ 2.77
R3HDM4-204ENST00000589428 BCORL1Q5H9F3 1711 aa32.34■■■□□ 2.77
R3HDM4-204ENST00000589428 AGLP35573 1532 aa32.34■■■□□ 2.77
R3HDM4-204ENST00000589428 KDM4FA0A1W2PPD8 638 aa32.29■■■□□ 2.76
R3HDM4-204ENST00000589428 DHX29Q7Z478 1369 aaKnown RBP32.27■■■□□ 2.76
R3HDM4-204ENST00000589428 MLECQ14165 292 aa32.27■■■□□ 2.76
R3HDM4-204ENST00000589428 CHIC2Q9UKJ5 165 aa32.27■■■□□ 2.76
R3HDM4-204ENST00000589428 ADAMTSL3P82987 1691 aa32.26■■■□□ 2.75
R3HDM4-204ENST00000589428 ANKRD30AQ9BXX3 1397 aa32.25■■■□□ 2.75
R3HDM4-204ENST00000589428 KIF15Q9NS87 1388 aa32.24■■■□□ 2.75
R3HDM4-204ENST00000589428 PCGF6Q9BYE7 350 aa32.23■■■□□ 2.75
R3HDM4-204ENST00000589428 ADGRL2O95490 1459 aa32.23■■■□□ 2.75
R3HDM4-204ENST00000589428 ITGAEP38570 1179 aa32.23■■■□□ 2.75
R3HDM4-204ENST00000589428 DUOX2Q9NRD8 1548 aa32.22■■■□□ 2.75
R3HDM4-204ENST00000589428 MADDQ8WXG6 1647 aa32.21■■■□□ 2.75
R3HDM4-204ENST00000589428 PTPRKQ15262 1439 aa32.2■■■□□ 2.75
R3HDM4-204ENST00000589428 RRP7BPQ9NSQ0 103 aa32.2■■■□□ 2.74
R3HDM4-204ENST00000589428 NCOA1Q15788 1441 aa32.19■■■□□ 2.74
R3HDM4-204ENST00000589428 FER1L4A9Z1Z3 1794 aa32.16■■■□□ 2.74
R3HDM4-204ENST00000589428 EIF2AK4Q9P2K8 1649 aaKnown RBP32.15■■■□□ 2.74
R3HDM4-204ENST00000589428 KIF3BO15066 747 aa32.14■■■□□ 2.74
R3HDM4-204ENST00000589428 ERBINQ96RT1 1412 aa32.13■■■□□ 2.73
R3HDM4-204ENST00000589428 ROCK1Q13464 1354 aa32.13■■■□□ 2.73
R3HDM4-204ENST00000589428 RIMS1Q86UR5 1692 aaKnown RBP32.13■■■□□ 2.73
R3HDM4-204ENST00000589428 GGT6Q6P531 493 aa32.1■■■□□ 2.73
R3HDM4-204ENST00000589428 ESF1Q9H501 851 aaKnown RBP32.09■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms