RNA–Protein interactions for RNA: ENST00000589367.5

NLE1-206, Transcript of notchless homolog 1, humanhuman

TSL 5

Gene NLE1, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-206ENST00000589367 ZMYM4Q5VZL5 1548 aa32.2■■■□□ 2.74
NLE1-206ENST00000589367 ARHGEF40Q8TER5 1519 aa32.18■■■□□ 2.74
NLE1-206ENST00000589367 MAGI2Q86UL8 1455 aa32.16■■■□□ 2.74
NLE1-206ENST00000589367 LOC105371045A0A1W2PR82 267 aa32.14■■■□□ 2.74
NLE1-206ENST00000589367 ARID4BQ4LE39 1312 aaPredicted RBP32.12■■■□□ 2.73
NLE1-206ENST00000589367 ZFYVE16Q7Z3T8 1539 aa32.11■■■□□ 2.73
NLE1-206ENST00000589367 YEATS2Q9ULM3 1422 aa32.1■■■□□ 2.73
NLE1-206ENST00000589367 PREX2Q70Z35 1606 aa32.08■■■□□ 2.73
NLE1-206ENST00000589367 ZNF518AQ6AHZ1 1483 aa32.07■■■□□ 2.72
NLE1-206ENST00000589367 MTUS2Q5JR59 1369 aa32.06■■■□□ 2.72
NLE1-206ENST00000589367 CDC42BPBQ9Y5S2 1711 aa32.05■■■□□ 2.72
NLE1-206ENST00000589367 AFAP1Q8N556 730 aa32.03■■■□□ 2.72
NLE1-206ENST00000589367 ADAMTSL3P82987 1691 aa32.02■■■□□ 2.72
NLE1-206ENST00000589367 BCORL1Q5H9F3 1711 aa32■■■□□ 2.71
NLE1-206ENST00000589367 GPATCH8Q9UKJ3 1502 aaKnown RBP32■■■□□ 2.71
NLE1-206ENST00000589367 KDM5CP41229 1560 aa31.98■■■□□ 2.71
NLE1-206ENST00000589367 ABCC1P33527 1531 aa31.98■■■□□ 2.71
NLE1-206ENST00000589367 CDC42BPAQ5VT25 1732 aa31.97■■■□□ 2.71
NLE1-206ENST00000589367 ATP10AO60312 1499 aa31.97■■■□□ 2.71
NLE1-206ENST00000589367 ARHGEF12Q9NZN5 1544 aa31.95■■■□□ 2.71
NLE1-206ENST00000589367 CCNB3Q8WWL7 1395 aa31.95■■■□□ 2.71
NLE1-206ENST00000589367 PTPRMP28827 1452 aa31.95■■■□□ 2.7
NLE1-206ENST00000589367 C9orf84Q5VXU9 1444 aa31.94■■■□□ 2.7
NLE1-206ENST00000589367 TRAPPC8Q9Y2L5 1435 aa31.94■■■□□ 2.7
NLE1-206ENST00000589367 ZNF777Q9ULD5 760 aaPredicted RBP31.94■■■□□ 2.7
NLE1-206ENST00000589367 EHBP1L1Q8N3D4 1523 aa31.94■■■□□ 2.7
NLE1-206ENST00000589367 VPS8Q8N3P4 1428 aa31.92■■■□□ 2.7
NLE1-206ENST00000589367 CFDP1Q9UEE9 299 aaPredicted RBP31.92■■■□□ 2.7
NLE1-206ENST00000589367 MYT1LQ9UL68 1186 aa31.92■■■□□ 2.7
NLE1-206ENST00000589367 MLH3Q9UHC1 1453 aa31.91■■■□□ 2.7
NLE1-206ENST00000589367 MADDQ8WXG6 1647 aa31.89■■■□□ 2.7
NLE1-206ENST00000589367 HECW2Q9P2P5 1572 aa31.89■■■□□ 2.7
NLE1-206ENST00000589367 SIGLEC1Q9BZZ2 1709 aa31.87■■■□□ 2.69
NLE1-206ENST00000589367 ITSN2Q9NZM3 1697 aa31.87■■■□□ 2.69
NLE1-206ENST00000589367 SAMD9LQ8IVG5 1584 aa31.86■■■□□ 2.69
NLE1-206ENST00000589367 PLEKHH2Q8IVE3 1493 aa31.84■■■□□ 2.69
NLE1-206ENST00000589367 KIAA1107Q9UPP5 1409 aa31.84■■■□□ 2.69
NLE1-206ENST00000589367 MLECQ14165 292 aa31.84■■■□□ 2.69
NLE1-206ENST00000589367 DIP2CQ9Y2E4 1556 aa31.81■■■□□ 2.68
NLE1-206ENST00000589367 SYCP2Q9BX26 1530 aa31.81■■■□□ 2.68
NLE1-206ENST00000589367 TIAM1Q13009 1591 aa31.81■■■□□ 2.68
NLE1-206ENST00000589367 HNRNPMP52272 730 aaKnown RBP eCLIP31.8■■■□□ 2.68
NLE1-206ENST00000589367 REREQ9P2R6 1566 aa31.78■■■□□ 2.68
NLE1-206ENST00000589367 RIMS1Q86UR5 1692 aaKnown RBP31.76■■■□□ 2.68
NLE1-206ENST00000589367 ABCA6Q8N139 1617 aa31.76■■■□□ 2.67
NLE1-206ENST00000589367 NCOA2Q15596 1464 aa31.75■■■□□ 2.67
NLE1-206ENST00000589367 SPAG9O60271 1321 aaKnown RBP31.75■■■□□ 2.67
NLE1-206ENST00000589367 ZNF644Q9H582 1327 aaPredicted RBP31.72■■■□□ 2.67
NLE1-206ENST00000589367 KIDINS220Q9ULH0 1771 aa31.71■■■□□ 2.67
NLE1-206ENST00000589367 SUPT6HQ7KZ85 1726 aaKnown RBP31.71■■■□□ 2.67
NLE1-206ENST00000589367 LRRC9Q6ZRR7 1453 aa31.71■■■□□ 2.67
NLE1-206ENST00000589367 MAP3K1Q13233 1512 aa31.7■■■□□ 2.67
NLE1-206ENST00000589367 AGLP35573 1532 aa31.7■■■□□ 2.66
NLE1-206ENST00000589367 FER1L4A9Z1Z3 1794 aa31.66■■■□□ 2.66
NLE1-206ENST00000589367 MBD5Q9P267 1494 aa31.65■■■□□ 2.66
NLE1-206ENST00000589367 PLPPR3Q6T4P5 718 aa31.65■■■□□ 2.66
NLE1-206ENST00000589367 ATP7AQ04656 1500 aa31.64■■■□□ 2.66
NLE1-206ENST00000589367 KANK4Q5T7N3 995 aaPredicted RBP31.62■■■□□ 2.65
NLE1-206ENST00000589367 INO80Q9ULG1 1556 aaPredicted RBP31.61■■■□□ 2.65
NLE1-206ENST00000589367 LMTK3Q96Q04 1460 aa31.58■■■□□ 2.65
NLE1-206ENST00000589367 CAMSAP2Q08AD1 1489 aa31.57■■■□□ 2.64
NLE1-206ENST00000589367 APLP2Q06481 763 aa31.56■■■□□ 2.64
NLE1-206ENST00000589367 RSPH4AQ5TD94 716 aa31.56■■■□□ 2.64
NLE1-206ENST00000589367 ESF1Q9H501 851 aaKnown RBP31.55■■■□□ 2.64
NLE1-206ENST00000589367 RTEL1-TNFRSF6BF6WH68 1400 aa31.55■■■□□ 2.64
NLE1-206ENST00000589367 A2MP01023 1474 aa31.54■■■□□ 2.64
NLE1-206ENST00000589367 CEBPAP49715 358 aaPredicted RBP31.53■■■□□ 2.64
NLE1-206ENST00000589367 CCDC141Q6ZP82 1450 aa31.52■■■□□ 2.64
NLE1-206ENST00000589367 PLXNC1O60486 1568 aa31.5■■■□□ 2.63
NLE1-206ENST00000589367 CNTLNQ9NXG0 1405 aa31.48■■■□□ 2.63
NLE1-206ENST00000589367 MYOM3Q5VTT5 1437 aa31.47■■■□□ 2.63
NLE1-206ENST00000589367 MIA2Q96PC5 1412 aa31.46■■■□□ 2.63
NLE1-206ENST00000589367 ARHGEF5Q12774 1597 aa31.43■■■□□ 2.62
NLE1-206ENST00000589367 ADGBQ8N7X0 1667 aa31.42■■■□□ 2.62
NLE1-206ENST00000589367 TSPY4P0CV99 314 aa31.42■■■□□ 2.62
NLE1-206ENST00000589367 TSPY10P0CW01 314 aa31.42■■■□□ 2.62
NLE1-206ENST00000589367 HSPA2P54652 639 aa31.42■■■□□ 2.62
NLE1-206ENST00000589367 DHX29Q7Z478 1369 aaKnown RBP31.42■■■□□ 2.62
NLE1-206ENST00000589367 GGT6Q6P531 493 aa31.38■■■□□ 2.61
NLE1-206ENST00000589367 PPP6R1Q9UPN7 881 aa31.37■■■□□ 2.61
NLE1-206ENST00000589367 C3P01024 1663 aa31.35■■■□□ 2.61
NLE1-206ENST00000589367 UHRF1BP1Q6BDS2 1440 aa31.34■■■□□ 2.61
NLE1-206ENST00000589367 ZMYM3Q14202 1370 aa31.34■■■□□ 2.61
NLE1-206ENST00000589367 PREX1Q8TCU6 1659 aa31.34■■■□□ 2.61
NLE1-206ENST00000589367 MROH2AA6NES4 1674 aa31.3■■■□□ 2.6
NLE1-206ENST00000589367 KIF3BO15066 747 aa31.28■■■□□ 2.6
NLE1-206ENST00000589367 NPATQ14207 1427 aa31.28■■■□□ 2.6
NLE1-206ENST00000589367 MAST1Q9Y2H9 1570 aa31.27■■■□□ 2.6
NLE1-206ENST00000589367 SETD1BQ9UPS6 1966 aaKnown RBP31.26■■■□□ 2.6
NLE1-206ENST00000589367 FGD6Q6ZV73 1430 aa31.24■■■□□ 2.59
NLE1-206ENST00000589367 CLTCQ00610 1675 aaKnown RBP31.23■■■□□ 2.59
NLE1-206ENST00000589367 PTPN23Q9H3S7 1636 aa31.2■■■□□ 2.59
NLE1-206ENST00000589367 PTPRKQ15262 1439 aa31.18■■■□□ 2.58
NLE1-206ENST00000589367 TCOF1Q13428 1488 aaKnown RBP31.18■■■□□ 2.58
NLE1-206ENST00000589367 ABCC5O15440 1437 aa31.17■■■□□ 2.58
NLE1-206ENST00000589367 FAM135AQ9P2D6 1515 aa31.17■■■□□ 2.58
NLE1-206ENST00000589367 SHANK2Q9UPX8 1470 aa31.16■■■□□ 2.58
NLE1-206ENST00000589367 WASHC2CQ9Y4E1 1318 aa31.14■■■□□ 2.58
NLE1-206ENST00000589367 KDM5DQ9BY66 1539 aa31.14■■■□□ 2.57
NLE1-206ENST00000589367 ILDR1Q86SU0 546 aaPredicted RBP31.13■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms