RNA–Protein interactions for RNA: ENST00000589367.5

NLE1-206, Transcript of notchless homolog 1, humanhuman

TSL 5

Gene NLE1, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-206ENST00000589367 NISCHQ9Y2I1 1504 aa49.37■■■■■ 5.49
NLE1-206ENST00000589367 CCDC180Q9P1Z9 1646 aa44.02■■■■■ 4.64
NLE1-206ENST00000589367 ABCC9O60706 1549 aa43.55■■■■■ 4.56
NLE1-206ENST00000589367 RB1CC1Q8TDY2 1594 aa41.68■■■■■ 4.26
NLE1-206ENST00000589367 NACADO15069 1562 aa41.54■■■■■ 4.24
NLE1-206ENST00000589367 DCAF8L2P0C7V8 631 aa41.46■■■■■ 4.23
NLE1-206ENST00000589367 MYO15BQ96JP2 1530 aa41.19■■■■■ 4.18
NLE1-206ENST00000589367 ZCCHC6Q5VYS8 1495 aaKnown RBP41.04■■■■■ 4.16
NLE1-206ENST00000589367 DCAF1Q9Y4B6 1507 aa40.84■■■■■ 4.13
NLE1-206ENST00000589367 PABPN1Q86U42 306 aaKnown RBP eCLIP40.65■■■■■ 4.1
NLE1-206ENST00000589367 UNC13AQ9UPW8 1703 aa40.59■■■■■ 4.09
NLE1-206ENST00000589367 BICRAQ9NZM4 1560 aa40.41■■■■■ 4.06
NLE1-206ENST00000589367 DNAJC5BQ9UF47 199 aa40.38■■■■■ 4.05
NLE1-206ENST00000589367 SCRIBQ14160 1630 aa40.14■■■■■ 4.02
NLE1-206ENST00000589367 SHROOM4Q9ULL8 1493 aa40.02■■■■■ 4
NLE1-206ENST00000589367 EIF4G1Q04637 1599 aaKnown RBP39.41■■■■□ 3.9
NLE1-206ENST00000589367 CC2D2AQ9P2K1 1620 aa39.33■■■■□ 3.89
NLE1-206ENST00000589367 CECR2Q9BXF3 1484 aa39.19■■■■□ 3.86
NLE1-206ENST00000589367 NCAPD3P42695 1498 aa38.38■■■■□ 3.73
NLE1-206ENST00000589367 SMARCA4P51532 1647 aa38.36■■■■□ 3.73
NLE1-206ENST00000589367 ATAD2BQ9ULI0 1458 aa38.32■■■■□ 3.72
NLE1-206ENST00000589367 BAZ1AQ9NRL2 1556 aaPredicted RBP38.29■■■■□ 3.72
NLE1-206ENST00000589367 SMARCA2P51531 1590 aa38.23■■■■□ 3.71
NLE1-206ENST00000589367 HMGXB3Q12766 1538 aa38.12■■■■□ 3.69
NLE1-206ENST00000589367 MROH2BQ7Z745 1585 aa38.03■■■■□ 3.68
NLE1-206ENST00000589367 PEG3Q9GZU2 1588 aa38.02■■■■□ 3.68
NLE1-206ENST00000589367 BAZ1BQ9UIG0 1483 aaKnown RBP37.97■■■■□ 3.67
NLE1-206ENST00000589367 ERCC6Q03468 1493 aa37.58■■■■□ 3.61
NLE1-206ENST00000589367 WIZO95785 1651 aa37.54■■■■□ 3.6
NLE1-206ENST00000589367 NESP48681 1621 aa37.54■■■■□ 3.6
NLE1-206ENST00000589367 RSF1Q96T23 1441 aaPredicted RBP37.47■■■■□ 3.59
NLE1-206ENST00000589367 LAMC3Q9Y6N6 1575 aa37.38■■■■□ 3.58
NLE1-206ENST00000589367 CUX2O14529 1486 aa37.35■■■■□ 3.57
NLE1-206ENST00000589367 CADPSQ9ULU8 1353 aa37.25■■■■□ 3.55
NLE1-206ENST00000589367 PDS5BQ9NTI5 1447 aa37.2■■■■□ 3.55
NLE1-206ENST00000589367 TOP2AP11388 1531 aaKnown RBP37.17■■■■□ 3.54
NLE1-206ENST00000589367 THOC2Q8NI27 1593 aaKnown RBP37.04■■■■□ 3.52
NLE1-206ENST00000589367 KIF21AQ7Z4S6 1674 aa36.99■■■■□ 3.51
NLE1-206ENST00000589367 CFTRP13569 1480 aa36.92■■■■□ 3.5
NLE1-206ENST00000589367 MRC2Q9UBG0 1479 aa36.82■■■■□ 3.49
NLE1-206ENST00000589367 FANCD2Q9BXW9 1451 aa36.79■■■■□ 3.48
NLE1-206ENST00000589367 CEP164Q9UPV0 1460 aa36.78■■■■□ 3.48
NLE1-206ENST00000589367 CCDC88BA6NC98 1476 aa36.75■■■■□ 3.47
NLE1-206ENST00000589367 DNAJC5Q9H3Z4 198 aa36.74■■■■□ 3.47
NLE1-206ENST00000589367 WDR62O43379 1518 aa36.7■■■■□ 3.47
NLE1-206ENST00000589367 URB2Q14146 1524 aaKnown RBP36.44■■■■□ 3.42
NLE1-206ENST00000589367 PRDM2Q13029 1718 aa36.43■■■■□ 3.42
NLE1-206ENST00000589367 SUPT5HO00267 1087 aaKnown RBP36.2■■■■□ 3.39
NLE1-206ENST00000589367 TOPBP1Q92547 1522 aa36.14■■■■□ 3.38
NLE1-206ENST00000589367 ABCC8Q09428 1581 aa36.14■■■■□ 3.38
NLE1-206ENST00000589367 DNMBPQ6XZF7 1577 aa36.05■■■■□ 3.36
NLE1-206ENST00000589367 IFT140Q96RY7 1462 aa36.05■■■■□ 3.36
NLE1-206ENST00000589367 ZNF608Q9ULD9 1512 aaPredicted RBP35.89■■■■□ 3.34
NLE1-206ENST00000589367 POLA1P09884 1462 aaPredicted RBP35.81■■■■□ 3.32
NLE1-206ENST00000589367 OSCARQ8IYS5 282 aa35.76■■■■□ 3.32
NLE1-206ENST00000589367 TARBP1Q13395 1621 aaKnown RBP35.75■■■■□ 3.31
NLE1-206ENST00000589367 CUX1P39880 1505 aa35.7■■■■□ 3.31
NLE1-206ENST00000589367 EIF4G3O43432 1585 aaKnown RBP35.69■■■■□ 3.3
NLE1-206ENST00000589367 SOGA1O94964 1423 aa35.68■■■■□ 3.3
NLE1-206ENST00000589367 FGD5Q6ZNL6 1462 aa35.67■■■■□ 3.3
NLE1-206ENST00000589367 AQRO60306 1485 aaKnown RBP eCLIP35.66■■■■□ 3.32e-6■■■■■ 33.8
NLE1-206ENST00000589367 RAD54L2Q9Y4B4 1467 aa35.66■■■■□ 3.3
NLE1-206ENST00000589367 TDRD9Q8NDG6 1382 aaKnown RBP35.53■■■■□ 3.28
NLE1-206ENST00000589367 WDR97A6NE52 1622 aa35.46■■■■□ 3.27
NLE1-206ENST00000589367 WRNQ14191 1432 aaPredicted RBP eCLIP35.35■■■■□ 3.25
NLE1-206ENST00000589367 FBLN2P98095 1184 aa35.33■■■■□ 3.25
NLE1-206ENST00000589367 TRIM41Q8WV44 630 aa35.32■■■■□ 3.24
NLE1-206ENST00000589367 GRIN2BQ13224 1484 aa35.31■■■■□ 3.24
NLE1-206ENST00000589367 ABCA10Q8WWZ4 1543 aa35.31■■■■□ 3.24
NLE1-206ENST00000589367 SNAPC4Q5SXM2 1469 aa35.3■■■■□ 3.24
NLE1-206ENST00000589367 CHD1O14646 1710 aa35.26■■■■□ 3.24
NLE1-206ENST00000589367 TOP2BQ02880 1626 aa35.26■■■■□ 3.24
NLE1-206ENST00000589367 MAGI1Q96QZ7 1491 aaPredicted RBP35.26■■■■□ 3.23
NLE1-206ENST00000589367 GAPVD1Q14C86 1478 aa35.25■■■■□ 3.23
NLE1-206ENST00000589367 BIVM-ERCC5R4GMW8 1640 aa35.24■■■■□ 3.23
NLE1-206ENST00000589367 SYNJ1O43426 1573 aa35.22■■■■□ 3.23
NLE1-206ENST00000589367 CHMP7Q8WUX9 453 aaPredicted RBP35.18■■■■□ 3.22
NLE1-206ENST00000589367 ABCA5Q8WWZ7 1642 aa35.15■■■■□ 3.22
NLE1-206ENST00000589367 SYNJ2O15056 1496 aa35.13■■■■□ 3.21
NLE1-206ENST00000589367 RIMBP3CA6NJZ7 1639 aa35.13■■■■□ 3.21
NLE1-206ENST00000589367 RIMBP3BA6NNM3 1639 aa35.13■■■■□ 3.21
NLE1-206ENST00000589367 RIMBP3Q9UFD9 1639 aa35.13■■■■□ 3.21
NLE1-206ENST00000589367 ARHGEF11O15085 1522 aa35.12■■■■□ 3.21
NLE1-206ENST00000589367 PBRM1Q86U86 1689 aa35.08■■■■□ 3.21
NLE1-206ENST00000589367 CLASP1Q7Z460 1538 aa34.96■■■■□ 3.19
NLE1-206ENST00000589367 ERICH3Q5RHP9 1530 aa34.86■■■■□ 3.17
NLE1-206ENST00000589367 CYB5RLQ6IPT4 315 aa34.86■■■■□ 3.17
NLE1-206ENST00000589367 ADAMTS12P58397 1594 aa34.86■■■■□ 3.17
NLE1-206ENST00000589367 FHAD1B1AJZ9 1412 aa34.85■■■■□ 3.17
NLE1-206ENST00000589367 GRIN2AQ12879 1464 aa34.84■■■■□ 3.17
NLE1-206ENST00000589367 ARAP1Q96P48 1450 aa34.82■■■■□ 3.16
NLE1-206ENST00000589367 NUP160Q12769 1436 aa34.72■■■■□ 3.15
NLE1-206ENST00000589367 KIF27Q86VH2 1401 aa34.65■■■■□ 3.14
NLE1-206ENST00000589367 CEP170Q5SW79 1584 aa34.65■■■■□ 3.14
NLE1-206ENST00000589367 IGF1RP08069 1367 aa34.57■■■■□ 3.12
NLE1-206ENST00000589367 SHROOM2Q13796 1616 aa34.44■■■■□ 3.1
NLE1-206ENST00000589367 ERCC6L2Q5T890 1561 aa34.43■■■■□ 3.1
NLE1-206ENST00000589367 CUL7Q14999 1698 aa34.42■■■■□ 3.1
NLE1-206ENST00000589367 JPH4Q96JJ6 628 aa34.39■■■■□ 3.1
NLE1-206ENST00000589367 CARMIL1Q5VZK9 1371 aa34.36■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms