RNA–Protein interactions for RNA: ENST00000589201.1

LINC00654-202, long intergenic non-protein coding RNA 654, humanhuman

TSL 3 BASIC

Gene LINC00654, Length 579 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-202ENST00000589201 SCAPERQ9BY12 1400 aa31.56■■■□□ 2.64
LINC00654-202ENST00000589201 RICTORQ6R327 1708 aa31.54■■■□□ 2.64
LINC00654-202ENST00000589201 CDC42BPBQ9Y5S2 1711 aa31.54■■■□□ 2.64
LINC00654-202ENST00000589201 PREX2Q70Z35 1606 aa31.5■■■□□ 2.63
LINC00654-202ENST00000589201 CDC42BPAQ5VT25 1732 aa31.49■■■□□ 2.63
LINC00654-202ENST00000589201 GPATCH8Q9UKJ3 1502 aaKnown RBP31.47■■■□□ 2.63
LINC00654-202ENST00000589201 POGZQ7Z3K3 1410 aa31.46■■■□□ 2.63
LINC00654-202ENST00000589201 EHBP1L1Q8N3D4 1523 aa31.45■■■□□ 2.63
LINC00654-202ENST00000589201 TIAM1Q13009 1591 aa31.43■■■□□ 2.62
LINC00654-202ENST00000589201 CCNB3Q8WWL7 1395 aa31.43■■■□□ 2.62
LINC00654-202ENST00000589201 ZMYM4Q5VZL5 1548 aa31.41■■■□□ 2.62
LINC00654-202ENST00000589201 ZNF777Q9ULD5 760 aaPredicted RBP31.41■■■□□ 2.62
LINC00654-202ENST00000589201 AFAP1Q8N556 730 aa31.4■■■□□ 2.62
LINC00654-202ENST00000589201 CFDP1Q9UEE9 299 aaPredicted RBP31.38■■■□□ 2.61
LINC00654-202ENST00000589201 ARHGEF12Q9NZN5 1544 aa31.36■■■□□ 2.61
LINC00654-202ENST00000589201 MAGI2Q86UL8 1455 aa31.36■■■□□ 2.61
LINC00654-202ENST00000589201 YEATS2Q9ULM3 1422 aa31.36■■■□□ 2.61
LINC00654-202ENST00000589201 ZNF518AQ6AHZ1 1483 aa31.35■■■□□ 2.61
LINC00654-202ENST00000589201 ABCC1P33527 1531 aa31.34■■■□□ 2.61
LINC00654-202ENST00000589201 ARHGEF40Q8TER5 1519 aa31.34■■■□□ 2.61
LINC00654-202ENST00000589201 ZFYVE16Q7Z3T8 1539 aa31.34■■■□□ 2.61
LINC00654-202ENST00000589201 LRRC9Q6ZRR7 1453 aa31.33■■■□□ 2.61
LINC00654-202ENST00000589201 KANK4Q5T7N3 995 aaPredicted RBP31.33■■■□□ 2.61
LINC00654-202ENST00000589201 MAP3K1Q13233 1512 aa31.33■■■□□ 2.61
LINC00654-202ENST00000589201 TRAPPC8Q9Y2L5 1435 aa31.32■■■□□ 2.6
LINC00654-202ENST00000589201 SAMD9LQ8IVG5 1584 aa31.31■■■□□ 2.6
LINC00654-202ENST00000589201 NCOA2Q15596 1464 aa31.31■■■□□ 2.6
LINC00654-202ENST00000589201 ARID4BQ4LE39 1312 aaPredicted RBP31.3■■■□□ 2.6
LINC00654-202ENST00000589201 SUPT6HQ7KZ85 1726 aaKnown RBP31.3■■■□□ 2.6
LINC00654-202ENST00000589201 ITSN2Q9NZM3 1697 aa31.29■■■□□ 2.6
LINC00654-202ENST00000589201 KDM5CP41229 1560 aa31.28■■■□□ 2.6
LINC00654-202ENST00000589201 HNRNPMP52272 730 aaKnown RBP eCLIP31.28■■■□□ 2.6
LINC00654-202ENST00000589201 MYT1LQ9UL68 1186 aa31.27■■■□□ 2.6
LINC00654-202ENST00000589201 APLP2Q06481 763 aa31.26■■■□□ 2.59
LINC00654-202ENST00000589201 ZNF644Q9H582 1327 aaPredicted RBP31.24■■■□□ 2.59
LINC00654-202ENST00000589201 SYCP2Q9BX26 1530 aa31.23■■■□□ 2.59
LINC00654-202ENST00000589201 KIAA1107Q9UPP5 1409 aa31.23■■■□□ 2.59
LINC00654-202ENST00000589201 ATP10AO60312 1499 aa31.21■■■□□ 2.59
LINC00654-202ENST00000589201 PLEKHH2Q8IVE3 1493 aa31.21■■■□□ 2.59
LINC00654-202ENST00000589201 MLH3Q9UHC1 1453 aa31.21■■■□□ 2.59
LINC00654-202ENST00000589201 HECW2Q9P2P5 1572 aa31.2■■■□□ 2.58
LINC00654-202ENST00000589201 SIGLEC1Q9BZZ2 1709 aa31.18■■■□□ 2.58
LINC00654-202ENST00000589201 BCORL1Q5H9F3 1711 aa31.16■■■□□ 2.58
LINC00654-202ENST00000589201 C9orf84Q5VXU9 1444 aa31.15■■■□□ 2.58
LINC00654-202ENST00000589201 ADAMTSL3P82987 1691 aa31.15■■■□□ 2.58
LINC00654-202ENST00000589201 SPAG9O60271 1321 aaKnown RBP31.13■■■□□ 2.57
LINC00654-202ENST00000589201 DIP2CQ9Y2E4 1556 aa31.12■■■□□ 2.57
LINC00654-202ENST00000589201 KIDINS220Q9ULH0 1771 aa31.12■■■□□ 2.57
LINC00654-202ENST00000589201 ABCA6Q8N139 1617 aa31.1■■■□□ 2.57
LINC00654-202ENST00000589201 MBD5Q9P267 1494 aa31.1■■■□□ 2.57
LINC00654-202ENST00000589201 MLECQ14165 292 aa31.1■■■□□ 2.57
LINC00654-202ENST00000589201 CAMSAP2Q08AD1 1489 aa31.08■■■□□ 2.57
LINC00654-202ENST00000589201 MADDQ8WXG6 1647 aa31.06■■■□□ 2.56
LINC00654-202ENST00000589201 MYOM3Q5VTT5 1437 aa31.03■■■□□ 2.56
LINC00654-202ENST00000589201 PTPRMP28827 1452 aa31.02■■■□□ 2.56
LINC00654-202ENST00000589201 REREQ9P2R6 1566 aa31.02■■■□□ 2.56
LINC00654-202ENST00000589201 ATP7AQ04656 1500 aa31.02■■■□□ 2.56
LINC00654-202ENST00000589201 RSPH4AQ5TD94 716 aa30.99■■■□□ 2.55
LINC00654-202ENST00000589201 INO80Q9ULG1 1556 aaPredicted RBP30.99■■■□□ 2.55
LINC00654-202ENST00000589201 MIA2Q96PC5 1412 aa30.98■■■□□ 2.55
LINC00654-202ENST00000589201 CCDC141Q6ZP82 1450 aa30.96■■■□□ 2.55
LINC00654-202ENST00000589201 RIMS1Q86UR5 1692 aaKnown RBP30.96■■■□□ 2.55
LINC00654-202ENST00000589201 AGLP35573 1532 aa30.94■■■□□ 2.54
LINC00654-202ENST00000589201 RTEL1-TNFRSF6BF6WH68 1400 aa30.93■■■□□ 2.54
LINC00654-202ENST00000589201 ARHGEF5Q12774 1597 aa30.92■■■□□ 2.54
LINC00654-202ENST00000589201 TSPY4P0CV99 314 aa30.9■■■□□ 2.54
LINC00654-202ENST00000589201 TSPY10P0CW01 314 aa30.9■■■□□ 2.54
LINC00654-202ENST00000589201 FER1L4A9Z1Z3 1794 aa30.89■■■□□ 2.54
LINC00654-202ENST00000589201 A2MP01023 1474 aa30.89■■■□□ 2.54
LINC00654-202ENST00000589201 PLPPR3Q6T4P5 718 aa30.89■■■□□ 2.54
LINC00654-202ENST00000589201 FGD6Q6ZV73 1430 aa30.84■■■□□ 2.53
LINC00654-202ENST00000589201 ADGBQ8N7X0 1667 aa30.84■■■□□ 2.53
LINC00654-202ENST00000589201 PTPN23Q9H3S7 1636 aa30.84■■■□□ 2.53
LINC00654-202ENST00000589201 PLXNC1O60486 1568 aa30.83■■■□□ 2.53
LINC00654-202ENST00000589201 DHX29Q7Z478 1369 aaKnown RBP30.8■■■□□ 2.52
LINC00654-202ENST00000589201 CEBPAP49715 358 aaPredicted RBP30.79■■■□□ 2.52
LINC00654-202ENST00000589201 PPARGC1BQ86YN6 1023 aaKnown RBP30.79■■■□□ 2.52
LINC00654-202ENST00000589201 ESF1Q9H501 851 aaKnown RBP30.78■■■□□ 2.52
LINC00654-202ENST00000589201 TCOF1Q13428 1488 aaKnown RBP30.77■■■□□ 2.52
LINC00654-202ENST00000589201 GGT6Q6P531 493 aa30.76■■■□□ 2.51
LINC00654-202ENST00000589201 MAST1Q9Y2H9 1570 aa30.75■■■□□ 2.51
LINC00654-202ENST00000589201 ABCC5O15440 1437 aa30.73■■■□□ 2.51
LINC00654-202ENST00000589201 KIF3BO15066 747 aa30.7■■■□□ 2.51
LINC00654-202ENST00000589201 FAM50AQ14320 339 aaKnown RBP30.69■■■□□ 2.5
LINC00654-202ENST00000589201 DAPK1P53355 1430 aa30.68■■■□□ 2.5
LINC00654-202ENST00000589201 CNTLNQ9NXG0 1405 aa30.68■■■□□ 2.5
LINC00654-202ENST00000589201 DNMT1P26358 1616 aaKnown RBP30.66■■■□□ 2.5
LINC00654-202ENST00000589201 CROCC2H7BZ55 1655 aa30.65■■■□□ 2.5
LINC00654-202ENST00000589201 C3P01024 1663 aa30.65■■■□□ 2.5
LINC00654-202ENST00000589201 SHANK2Q9UPX8 1470 aa30.64■■■□□ 2.5
LINC00654-202ENST00000589201 PPP6R1Q9UPN7 881 aa30.64■■■□□ 2.5
LINC00654-202ENST00000589201 CHIC2Q9UKJ5 165 aa30.62■■■□□ 2.49
LINC00654-202ENST00000589201 ZMYM3Q14202 1370 aa30.62■■■□□ 2.49
LINC00654-202ENST00000589201 LMTK3Q96Q04 1460 aa30.62■■■□□ 2.49
LINC00654-202ENST00000589201 RRP7BPQ9NSQ0 103 aa30.61■■■□□ 2.49
LINC00654-202ENST00000589201 CLTCQ00610 1675 aaKnown RBP30.6■■■□□ 2.49
LINC00654-202ENST00000589201 MROH2AA6NES4 1674 aa30.58■■■□□ 2.49
LINC00654-202ENST00000589201 KIF15Q9NS87 1388 aa30.57■■■□□ 2.48
LINC00654-202ENST00000589201 DUOX2Q9NRD8 1548 aa30.56■■■□□ 2.48
LINC00654-202ENST00000589201 SETD1BQ9UPS6 1966 aaKnown RBP30.55■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms