RNA–Protein interactions for RNA: ENST00000589126.5

PRKCSH-208, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-208ENST00000589126 ARHGAP5Q13017 1502 aa21.71■■□□□ 1.07
PRKCSH-208ENST00000589126 ZMYM4Q5VZL5 1548 aa21.7■■□□□ 1.07
PRKCSH-208ENST00000589126 POGZQ7Z3K3 1410 aa21.7■■□□□ 1.06
PRKCSH-208ENST00000589126 ARHGEF40Q8TER5 1519 aa21.7■■□□□ 1.06
PRKCSH-208ENST00000589126 PREX2Q70Z35 1606 aa21.69■■□□□ 1.06
PRKCSH-208ENST00000589126 CDC42BPAQ5VT25 1732 aa21.67■■□□□ 1.06
PRKCSH-208ENST00000589126 YEATS2Q9ULM3 1422 aa21.66■■□□□ 1.06
PRKCSH-208ENST00000589126 ZFYVE16Q7Z3T8 1539 aa21.64■■□□□ 1.05
PRKCSH-208ENST00000589126 MAGI2Q86UL8 1455 aa21.64■■□□□ 1.05
PRKCSH-208ENST00000589126 GPATCH8Q9UKJ3 1502 aaKnown RBP21.62■■□□□ 1.05
PRKCSH-208ENST00000589126 MTUS2Q5JR59 1369 aa21.61■■□□□ 1.05
PRKCSH-208ENST00000589126 ARHGEF12Q9NZN5 1544 aa21.61■■□□□ 1.05
PRKCSH-208ENST00000589126 SIGLEC1Q9BZZ2 1709 aa21.61■■□□□ 1.05
PRKCSH-208ENST00000589126 ABCC1P33527 1531 aa21.6■■□□□ 1.05
PRKCSH-208ENST00000589126 ADAMTSL3P82987 1691 aa21.6■■□□□ 1.05
PRKCSH-208ENST00000589126 ZNF518AQ6AHZ1 1483 aa21.6■■□□□ 1.05
PRKCSH-208ENST00000589126 AFAP1Q8N556 730 aa21.6■■□□□ 1.05
PRKCSH-208ENST00000589126 KDM5CP41229 1560 aa21.59■■□□□ 1.05
PRKCSH-208ENST00000589126 BCORL1Q5H9F3 1711 aa21.59■■□□□ 1.05
PRKCSH-208ENST00000589126 VPS8Q8N3P4 1428 aa21.59■■□□□ 1.05
PRKCSH-208ENST00000589126 ARID4BQ4LE39 1312 aaPredicted RBP21.58■■□□□ 1.05
PRKCSH-208ENST00000589126 EHBP1L1Q8N3D4 1523 aa21.58■■□□□ 1.04
PRKCSH-208ENST00000589126 TRAPPC8Q9Y2L5 1435 aa21.57■■□□□ 1.04
PRKCSH-208ENST00000589126 ITSN2Q9NZM3 1697 aa21.56■■□□□ 1.04
PRKCSH-208ENST00000589126 SAMD9LQ8IVG5 1584 aa21.56■■□□□ 1.04
PRKCSH-208ENST00000589126 CCNB3Q8WWL7 1395 aa21.54■■□□□ 1.04
PRKCSH-208ENST00000589126 TIAM1Q13009 1591 aa21.53■■□□□ 1.04
PRKCSH-208ENST00000589126 ATP10AO60312 1499 aa21.53■■□□□ 1.04
PRKCSH-208ENST00000589126 ZNF777Q9ULD5 760 aaPredicted RBP21.53■■□□□ 1.04
PRKCSH-208ENST00000589126 HECW2Q9P2P5 1572 aa21.53■■□□□ 1.04
PRKCSH-208ENST00000589126 MADDQ8WXG6 1647 aa21.52■■□□□ 1.04
PRKCSH-208ENST00000589126 CFDP1Q9UEE9 299 aaPredicted RBP21.51■■□□□ 1.03
PRKCSH-208ENST00000589126 MLH3Q9UHC1 1453 aa21.51■■□□□ 1.03
PRKCSH-208ENST00000589126 PTPRMP28827 1452 aa21.5■■□□□ 1.03
PRKCSH-208ENST00000589126 SYCP2Q9BX26 1530 aa21.5■■□□□ 1.03
PRKCSH-208ENST00000589126 DIP2CQ9Y2E4 1556 aa21.49■■□□□ 1.03
PRKCSH-208ENST00000589126 C9orf84Q5VXU9 1444 aa21.49■■□□□ 1.03
PRKCSH-208ENST00000589126 ABCA6Q8N139 1617 aa21.47■■□□□ 1.03
PRKCSH-208ENST00000589126 HNRNPMP52272 730 aaKnown RBP eCLIP21.47■■□□□ 1.03
PRKCSH-208ENST00000589126 NCOA2Q15596 1464 aa21.46■■□□□ 1.03
PRKCSH-208ENST00000589126 SUPT6HQ7KZ85 1726 aaKnown RBP21.46■■□□□ 1.03
PRKCSH-208ENST00000589126 KIDINS220Q9ULH0 1771 aa21.46■■□□□ 1.03
PRKCSH-208ENST00000589126 KIAA1107Q9UPP5 1409 aa21.46■■□□□ 1.03
PRKCSH-208ENST00000589126 MYT1LQ9UL68 1186 aa21.45■■□□□ 1.02
PRKCSH-208ENST00000589126 ZNF644Q9H582 1327 aaPredicted RBP21.45■■□□□ 1.02
PRKCSH-208ENST00000589126 LRRC9Q6ZRR7 1453 aa21.45■■□□□ 1.02
PRKCSH-208ENST00000589126 RIMS1Q86UR5 1692 aaKnown RBP21.44■■□□□ 1.02
PRKCSH-208ENST00000589126 MLECQ14165 292 aa21.44■■□□□ 1.02
PRKCSH-208ENST00000589126 PLEKHH2Q8IVE3 1493 aa21.44■■□□□ 1.02
PRKCSH-208ENST00000589126 KANK4Q5T7N3 995 aaPredicted RBP21.43■■□□□ 1.02
PRKCSH-208ENST00000589126 MAP3K1Q13233 1512 aa21.43■■□□□ 1.02
PRKCSH-208ENST00000589126 REREQ9P2R6 1566 aa21.43■■□□□ 1.02
PRKCSH-208ENST00000589126 MBD5Q9P267 1494 aa21.39■■□□□ 1.01
PRKCSH-208ENST00000589126 FER1L4A9Z1Z3 1794 aa21.38■■□□□ 1.01
PRKCSH-208ENST00000589126 SPAG9O60271 1321 aaKnown RBP21.38■■□□□ 1.01
PRKCSH-208ENST00000589126 INO80Q9ULG1 1556 aaPredicted RBP21.37■■□□□ 1.01
PRKCSH-208ENST00000589126 AGLP35573 1532 aa21.35■■□□□ 1.01
PRKCSH-208ENST00000589126 ATP7AQ04656 1500 aa21.35■■□□□ 1.01
PRKCSH-208ENST00000589126 CAMSAP2Q08AD1 1489 aa21.34■■□□□ 1.01
PRKCSH-208ENST00000589126 PLPPR3Q6T4P5 718 aa21.31■■□□□ 1
PRKCSH-208ENST00000589126 PLXNC1O60486 1568 aa21.28■■□□□ 1
PRKCSH-208ENST00000589126 CCDC141Q6ZP82 1450 aa21.27■■□□□ 1
PRKCSH-208ENST00000589126 A2MP01023 1474 aa21.26■□□□□ 0.99
PRKCSH-208ENST00000589126 LMTK3Q96Q04 1460 aa21.26■□□□□ 0.99
PRKCSH-208ENST00000589126 RTEL1-TNFRSF6BF6WH68 1400 aa21.26■□□□□ 0.99
PRKCSH-208ENST00000589126 MYOM3Q5VTT5 1437 aa21.26■□□□□ 0.99
PRKCSH-208ENST00000589126 CEBPAP49715 358 aaPredicted RBP21.25■□□□□ 0.99
PRKCSH-208ENST00000589126 APLP2Q06481 763 aa21.25■□□□□ 0.99
PRKCSH-208ENST00000589126 ARHGEF5Q12774 1597 aa21.24■□□□□ 0.99
PRKCSH-208ENST00000589126 ADGBQ8N7X0 1667 aa21.24■□□□□ 0.99
PRKCSH-208ENST00000589126 MIA2Q96PC5 1412 aa21.22■□□□□ 0.99
PRKCSH-208ENST00000589126 RSPH4AQ5TD94 716 aa21.22■□□□□ 0.99
PRKCSH-208ENST00000589126 C3P01024 1663 aa21.19■□□□□ 0.98
PRKCSH-208ENST00000589126 DHX29Q7Z478 1369 aaKnown RBP21.17■□□□□ 0.98
PRKCSH-208ENST00000589126 CNTLNQ9NXG0 1405 aa21.16■□□□□ 0.98
PRKCSH-208ENST00000589126 ESF1Q9H501 851 aaKnown RBP21.16■□□□□ 0.98
PRKCSH-208ENST00000589126 HSPA2P54652 639 aa21.15■□□□□ 0.98
PRKCSH-208ENST00000589126 TSPY4P0CV99 314 aa21.14■□□□□ 0.97
PRKCSH-208ENST00000589126 TSPY10P0CW01 314 aa21.14■□□□□ 0.97
PRKCSH-208ENST00000589126 GGT6Q6P531 493 aa21.14■□□□□ 0.97
PRKCSH-208ENST00000589126 PREX1Q8TCU6 1659 aa21.14■□□□□ 0.97
PRKCSH-208ENST00000589126 MAST1Q9Y2H9 1570 aa21.14■□□□□ 0.97
PRKCSH-208ENST00000589126 PTPN23Q9H3S7 1636 aa21.13■□□□□ 0.97
PRKCSH-208ENST00000589126 MROH2AA6NES4 1674 aa21.12■□□□□ 0.97
PRKCSH-208ENST00000589126 CLTCQ00610 1675 aaKnown RBP21.12■□□□□ 0.97
PRKCSH-208ENST00000589126 FGD6Q6ZV73 1430 aa21.12■□□□□ 0.97
PRKCSH-208ENST00000589126 ZMYM3Q14202 1370 aa21.1■□□□□ 0.97
PRKCSH-208ENST00000589126 TCOF1Q13428 1488 aaKnown RBP21.09■□□□□ 0.97
PRKCSH-208ENST00000589126 SETD1BQ9UPS6 1966 aaKnown RBP21.08■□□□□ 0.97
PRKCSH-208ENST00000589126 KIF3BO15066 747 aa21.08■□□□□ 0.97
PRKCSH-208ENST00000589126 ABCC5O15440 1437 aa21.08■□□□□ 0.97
PRKCSH-208ENST00000589126 UHRF1BP1Q6BDS2 1440 aa21.06■□□□□ 0.96
PRKCSH-208ENST00000589126 PPP6R1Q9UPN7 881 aa21.06■□□□□ 0.96
PRKCSH-208ENST00000589126 CROCC2H7BZ55 1655 aa21.05■□□□□ 0.96
PRKCSH-208ENST00000589126 DNMT1P26358 1616 aaKnown RBP21.04■□□□□ 0.96
PRKCSH-208ENST00000589126 DAPK1P53355 1430 aa21.04■□□□□ 0.96
PRKCSH-208ENST00000589126 NPATQ14207 1427 aa21.04■□□□□ 0.96
PRKCSH-208ENST00000589126 SHANK2Q9UPX8 1470 aa21.03■□□□□ 0.96
PRKCSH-208ENST00000589126 PTPRKQ15262 1439 aa21.02■□□□□ 0.96
PRKCSH-208ENST00000589126 KDM5DQ9BY66 1539 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms