RNA–Protein interactions for RNA: ENST00000589017.5

PRKAR1A-216, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, humanhuman

TSL 3

Gene PRKAR1A, Length 1,116 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAR1A-216ENST00000589017 PREX2Q70Z35 1606 aa30.01■■■□□ 2.39
PRKAR1A-216ENST00000589017 EFCAB2Q5VUJ9 269 aa30.01■■■□□ 2.39
PRKAR1A-216ENST00000589017 POGZQ7Z3K3 1410 aa30■■■□□ 2.39
PRKAR1A-216ENST00000589017 SCAPERQ9BY12 1400 aa30■■■□□ 2.39
PRKAR1A-216ENST00000589017 CDC42BPAQ5VT25 1732 aa29.96■■■□□ 2.39
PRKAR1A-216ENST00000589017 MAGI2Q86UL8 1455 aa29.95■■■□□ 2.39
PRKAR1A-216ENST00000589017 ZFYVE16Q7Z3T8 1539 aa29.95■■■□□ 2.38
PRKAR1A-216ENST00000589017 ADAMTSL3P82987 1691 aa29.91■■■□□ 2.38
PRKAR1A-216ENST00000589017 BCORL1Q5H9F3 1711 aa29.91■■■□□ 2.38
PRKAR1A-216ENST00000589017 LOC105371045A0A1W2PR82 267 aa29.9■■■□□ 2.38
PRKAR1A-216ENST00000589017 YEATS2Q9ULM3 1422 aa29.88■■■□□ 2.37
PRKAR1A-216ENST00000589017 ZNF518AQ6AHZ1 1483 aa29.88■■■□□ 2.37
PRKAR1A-216ENST00000589017 KDM5CP41229 1560 aa29.87■■■□□ 2.37
PRKAR1A-216ENST00000589017 ABCC1P33527 1531 aa29.86■■■□□ 2.37
PRKAR1A-216ENST00000589017 ITSN2Q9NZM3 1697 aa29.85■■■□□ 2.37
PRKAR1A-216ENST00000589017 MTUS2Q5JR59 1369 aa29.84■■■□□ 2.37
PRKAR1A-216ENST00000589017 SIGLEC1Q9BZZ2 1709 aa29.84■■■□□ 2.37
PRKAR1A-216ENST00000589017 EHBP1L1Q8N3D4 1523 aa29.83■■■□□ 2.37
PRKAR1A-216ENST00000589017 GPATCH8Q9UKJ3 1502 aaKnown RBP29.81■■■□□ 2.36
PRKAR1A-216ENST00000589017 ARID4BQ4LE39 1312 aaPredicted RBP29.81■■■□□ 2.36
PRKAR1A-216ENST00000589017 MADDQ8WXG6 1647 aa29.8■■■□□ 2.36
PRKAR1A-216ENST00000589017 HECW2Q9P2P5 1572 aa29.8■■■□□ 2.36
PRKAR1A-216ENST00000589017 SAMD9LQ8IVG5 1584 aa29.78■■■□□ 2.36
PRKAR1A-216ENST00000589017 ARHGEF12Q9NZN5 1544 aa29.78■■■□□ 2.36
PRKAR1A-216ENST00000589017 VPS8Q8N3P4 1428 aa29.77■■■□□ 2.36
PRKAR1A-216ENST00000589017 ATP10AO60312 1499 aa29.75■■■□□ 2.35
PRKAR1A-216ENST00000589017 AFAP1Q8N556 730 aa29.75■■■□□ 2.35
PRKAR1A-216ENST00000589017 PTPRMP28827 1452 aa29.74■■■□□ 2.35
PRKAR1A-216ENST00000589017 C9orf84Q5VXU9 1444 aa29.74■■■□□ 2.35
PRKAR1A-216ENST00000589017 CCNB3Q8WWL7 1395 aa29.74■■■□□ 2.35
PRKAR1A-216ENST00000589017 TRAPPC8Q9Y2L5 1435 aa29.73■■■□□ 2.35
PRKAR1A-216ENST00000589017 TIAM1Q13009 1591 aa29.73■■■□□ 2.35
PRKAR1A-216ENST00000589017 MLH3Q9UHC1 1453 aa29.72■■■□□ 2.35
PRKAR1A-216ENST00000589017 DIP2CQ9Y2E4 1556 aa29.72■■■□□ 2.35
PRKAR1A-216ENST00000589017 RIMS1Q86UR5 1692 aaKnown RBP29.7■■■□□ 2.35
PRKAR1A-216ENST00000589017 ABCA6Q8N139 1617 aa29.7■■■□□ 2.34
PRKAR1A-216ENST00000589017 SYCP2Q9BX26 1530 aa29.7■■■□□ 2.34
PRKAR1A-216ENST00000589017 REREQ9P2R6 1566 aa29.68■■■□□ 2.34
PRKAR1A-216ENST00000589017 ZNF777Q9ULD5 760 aaPredicted RBP29.67■■■□□ 2.34
PRKAR1A-216ENST00000589017 SUPT6HQ7KZ85 1726 aaKnown RBP29.67■■■□□ 2.34
PRKAR1A-216ENST00000589017 PLEKHH2Q8IVE3 1493 aa29.67■■■□□ 2.34
PRKAR1A-216ENST00000589017 KIDINS220Q9ULH0 1771 aa29.65■■■□□ 2.34
PRKAR1A-216ENST00000589017 CFDP1Q9UEE9 299 aaPredicted RBP29.65■■■□□ 2.34
PRKAR1A-216ENST00000589017 FER1L4A9Z1Z3 1794 aa29.64■■■□□ 2.34
PRKAR1A-216ENST00000589017 KIAA1107Q9UPP5 1409 aa29.63■■■□□ 2.33
PRKAR1A-216ENST00000589017 MYT1LQ9UL68 1186 aa29.63■■■□□ 2.33
PRKAR1A-216ENST00000589017 NCOA2Q15596 1464 aa29.61■■■□□ 2.33
PRKAR1A-216ENST00000589017 MAP3K1Q13233 1512 aa29.59■■■□□ 2.33
PRKAR1A-216ENST00000589017 LRRC9Q6ZRR7 1453 aa29.57■■■□□ 2.32
PRKAR1A-216ENST00000589017 HNRNPMP52272 730 aaKnown RBP eCLIP29.56■■■□□ 2.322e-6■■□□□ 11.9
PRKAR1A-216ENST00000589017 MLECQ14165 292 aa29.56■■■□□ 2.32
PRKAR1A-216ENST00000589017 INO80Q9ULG1 1556 aaPredicted RBP29.56■■■□□ 2.32
PRKAR1A-216ENST00000589017 AGLP35573 1532 aa29.55■■■□□ 2.32
PRKAR1A-216ENST00000589017 ATP7AQ04656 1500 aa29.54■■■□□ 2.32
PRKAR1A-216ENST00000589017 SPAG9O60271 1321 aaKnown RBP29.51■■■□□ 2.32
PRKAR1A-216ENST00000589017 MBD5Q9P267 1494 aa29.49■■■□□ 2.31
PRKAR1A-216ENST00000589017 ZNF644Q9H582 1327 aaPredicted RBP29.49■■■□□ 2.31
PRKAR1A-216ENST00000589017 CAMSAP2Q08AD1 1489 aa29.46■■■□□ 2.31
PRKAR1A-216ENST00000589017 PLXNC1O60486 1568 aa29.43■■■□□ 2.3
PRKAR1A-216ENST00000589017 KANK4Q5T7N3 995 aaPredicted RBP29.42■■■□□ 2.3
PRKAR1A-216ENST00000589017 LMTK3Q96Q04 1460 aa29.42■■■□□ 2.3
PRKAR1A-216ENST00000589017 ADGBQ8N7X0 1667 aa29.41■■■□□ 2.3
PRKAR1A-216ENST00000589017 CCDC141Q6ZP82 1450 aa29.39■■■□□ 2.3
PRKAR1A-216ENST00000589017 A2MP01023 1474 aa29.38■■■□□ 2.29
PRKAR1A-216ENST00000589017 RTEL1-TNFRSF6BF6WH68 1400 aa29.37■■■□□ 2.29
PRKAR1A-216ENST00000589017 PLPPR3Q6T4P5 718 aa29.37■■■□□ 2.29
PRKAR1A-216ENST00000589017 ARHGEF5Q12774 1597 aa29.37■■■□□ 2.29
PRKAR1A-216ENST00000589017 C3P01024 1663 aa29.34■■■□□ 2.29
PRKAR1A-216ENST00000589017 MYOM3Q5VTT5 1437 aa29.33■■■□□ 2.29
PRKAR1A-216ENST00000589017 PREX1Q8TCU6 1659 aa29.31■■■□□ 2.28
PRKAR1A-216ENST00000589017 APLP2Q06481 763 aa29.31■■■□□ 2.28
PRKAR1A-216ENST00000589017 RSPH4AQ5TD94 716 aa29.31■■■□□ 2.28
PRKAR1A-216ENST00000589017 MIA2Q96PC5 1412 aa29.3■■■□□ 2.28
PRKAR1A-216ENST00000589017 CNTLNQ9NXG0 1405 aa29.29■■■□□ 2.28
PRKAR1A-216ENST00000589017 MROH2AA6NES4 1674 aa29.29■■■□□ 2.28
PRKAR1A-216ENST00000589017 CEBPAP49715 358 aaPredicted RBP29.28■■■□□ 2.28
PRKAR1A-216ENST00000589017 ESF1Q9H501 851 aaKnown RBP29.27■■■□□ 2.28
PRKAR1A-216ENST00000589017 MAST1Q9Y2H9 1570 aa29.23■■■□□ 2.27
PRKAR1A-216ENST00000589017 CLTCQ00610 1675 aaKnown RBP29.22■■■□□ 2.27
PRKAR1A-216ENST00000589017 DHX29Q7Z478 1369 aaKnown RBP29.22■■■□□ 2.27
PRKAR1A-216ENST00000589017 SETD1BQ9UPS6 1966 aaKnown RBP29.19■■■□□ 2.26
PRKAR1A-216ENST00000589017 PTPN23Q9H3S7 1636 aa29.17■■■□□ 2.26
PRKAR1A-216ENST00000589017 TSPY4P0CV99 314 aa29.17■■■□□ 2.26
PRKAR1A-216ENST00000589017 TSPY10P0CW01 314 aa29.17■■■□□ 2.26
PRKAR1A-216ENST00000589017 HSPA2P54652 639 aa29.17■■■□□ 2.26
PRKAR1A-216ENST00000589017 UHRF1BP1Q6BDS2 1440 aa29.16■■■□□ 2.26
PRKAR1A-216ENST00000589017 GGT6Q6P531 493 aa29.14■■■□□ 2.26
PRKAR1A-216ENST00000589017 CROCC2H7BZ55 1655 aa29.14■■■□□ 2.26
PRKAR1A-216ENST00000589017 ZMYM3Q14202 1370 aa29.13■■■□□ 2.25
PRKAR1A-216ENST00000589017 PPP6R1Q9UPN7 881 aa29.12■■■□□ 2.25
PRKAR1A-216ENST00000589017 FGD6Q6ZV73 1430 aa29.11■■■□□ 2.25
PRKAR1A-216ENST00000589017 NPATQ14207 1427 aa29.11■■■□□ 2.25
PRKAR1A-216ENST00000589017 TCOF1Q13428 1488 aaKnown RBP29.1■■■□□ 2.25
PRKAR1A-216ENST00000589017 FAM135AQ9P2D6 1515 aa29.1■■■□□ 2.25
PRKAR1A-216ENST00000589017 SHANK2Q9UPX8 1470 aa29.08■■■□□ 2.25
PRKAR1A-216ENST00000589017 KIF3BO15066 747 aa29.07■■■□□ 2.24
PRKAR1A-216ENST00000589017 DNMT1P26358 1616 aaKnown RBP29.06■■■□□ 2.24
PRKAR1A-216ENST00000589017 EIF2AK4Q9P2K8 1649 aaKnown RBP29.06■■■□□ 2.24
PRKAR1A-216ENST00000589017 KDM5DQ9BY66 1539 aa29.05■■■□□ 2.24
PRKAR1A-216ENST00000589017 RNF17Q9BXT8 1623 aaKnown RBP29.05■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms