RNA–Protein interactions for RNA: ENST00000588852.1

SAFB-205, Transcript of scaffold attachment factor B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SAFB, Length 2,842 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB-205ENST00000588852 MRS2Q9HD23 443 aa21.1■□□□□ 0.97
SAFB-205ENST00000588852 POLR3GLQ9BT43 218 aa21.08■□□□□ 0.97
SAFB-205ENST00000588852 CCDC7Q96M83 1385 aa21.08■□□□□ 0.97
SAFB-205ENST00000588852 CNTLNQ9NXG0 1405 aa21.08■□□□□ 0.97
SAFB-205ENST00000588852 MSH5O43196 834 aa21.08■□□□□ 0.96
SAFB-205ENST00000588852 ZNF326Q5BKZ1 582 aaKnown RBP21.08■□□□□ 0.96
SAFB-205ENST00000588852 ANKRD30BQ9BXX2 1392 aa21.07■□□□□ 0.96
SAFB-205ENST00000588852 ZNF608Q9ULD9 1512 aaPredicted RBP21.06■□□□□ 0.96
SAFB-205ENST00000588852 ZNF777Q9ULD5 760 aaPredicted RBP21.05■□□□□ 0.96
SAFB-205ENST00000588852 PBRM1Q86U86 1689 aa21.05■□□□□ 0.96
SAFB-205ENST00000588852 WDR62O43379 1518 aa21.05■□□□□ 0.96
SAFB-205ENST00000588852 ABCC5O15440 1437 aa21.05■□□□□ 0.96
SAFB-205ENST00000588852 DAPK1P53355 1430 aa21.05■□□□□ 0.96
SAFB-205ENST00000588852 MIA2Q96PC5 1412 aa21.05■□□□□ 0.96
SAFB-205ENST00000588852 KIF7Q2M1P5 1343 aa21.05■□□□□ 0.96
SAFB-205ENST00000588852 NCOA1Q15788 1441 aa21.03■□□□□ 0.96
SAFB-205ENST00000588852 AKNAQ7Z591 1439 aa21.01■□□□□ 0.95
SAFB-205ENST00000588852 ADAMTS12P58397 1594 aa21■□□□□ 0.95
SAFB-205ENST00000588852 B4GALNT3Q6L9W6 998 aa21■□□□□ 0.95
SAFB-205ENST00000588852 RPRD2Q5VT52 1461 aaKnown RBP20.99■□□□□ 0.95
SAFB-205ENST00000588852 CDK11AQ9UQ88 783 aaPredicted RBP20.98■□□□□ 0.95
SAFB-205ENST00000588852 PRG4Q92954 1404 aaPredicted RBP20.97■□□□□ 0.95
SAFB-205ENST00000588852 TEX14Q8IWB6 1497 aa20.97■□□□□ 0.95
SAFB-205ENST00000588852 NUP153P49790 1475 aaKnown RBP20.97■□□□□ 0.95
SAFB-205ENST00000588852 DISP1Q96F81 1524 aa20.95■□□□□ 0.94
SAFB-205ENST00000588852 CFDP1Q9UEE9 299 aaPredicted RBP20.95■□□□□ 0.94
SAFB-205ENST00000588852 FBLN2P98095 1184 aa20.94■□□□□ 0.94
SAFB-205ENST00000588852 SPATA31E1Q6ZUB1 1445 aa20.93■□□□□ 0.94
SAFB-205ENST00000588852 ROCK1Q13464 1354 aa20.92■□□□□ 0.94
SAFB-205ENST00000588852 PKD2Q13563 968 aa20.91■□□□□ 0.94
SAFB-205ENST00000588852 PPP4R2Q9NY27 417 aa20.9■□□□□ 0.94
SAFB-205ENST00000588852 DNMT1P26358 1616 aaKnown RBP20.9■□□□□ 0.94
SAFB-205ENST00000588852 BCL11AQ9H165 835 aa20.89■□□□□ 0.94
SAFB-205ENST00000588852 ZBED9Q6R2W3 1325 aa20.89■□□□□ 0.93
SAFB-205ENST00000588852 PZPP20742 1482 aa20.88■□□□□ 0.93
SAFB-205ENST00000588852 PLB1Q6P1J6 1458 aa20.88■□□□□ 0.93
SAFB-205ENST00000588852 MRC2Q9UBG0 1479 aa20.88■□□□□ 0.93
SAFB-205ENST00000588852 KIAA0556O60303 1618 aa20.88■□□□□ 0.93
SAFB-205ENST00000588852 ERCC6Q03468 1493 aa20.86■□□□□ 0.93
SAFB-205ENST00000588852 KIAA0586Q9BVV6 1533 aa20.86■□□□□ 0.93
SAFB-205ENST00000588852 KDM2AQ9Y2K7 1162 aa20.84■□□□□ 0.93
SAFB-205ENST00000588852 CAMSAP2Q08AD1 1489 aa20.84■□□□□ 0.93
SAFB-205ENST00000588852 USP47Q96K76 1375 aa20.83■□□□□ 0.92
SAFB-205ENST00000588852 RAPGEF6Q8TEU7 1601 aa20.83■□□□□ 0.92
SAFB-205ENST00000588852 DHX29Q7Z478 1369 aaKnown RBP20.82■□□□□ 0.92
SAFB-205ENST00000588852 CHMP7Q8WUX9 453 aaPredicted RBP20.82■□□□□ 0.92
SAFB-205ENST00000588852 BCORL1Q5H9F3 1711 aa20.8■□□□□ 0.92
SAFB-205ENST00000588852 GPATCH8Q9UKJ3 1502 aaKnown RBP20.8■□□□□ 0.92
SAFB-205ENST00000588852 KIF14Q15058 1648 aa20.8■□□□□ 0.92
SAFB-205ENST00000588852 GRIN2AQ12879 1464 aa20.79■□□□□ 0.92
SAFB-205ENST00000588852 TROQ12816 1431 aaPredicted RBP20.78■□□□□ 0.92
SAFB-205ENST00000588852 FANCIQ9NVI1 1328 aa20.78■□□□□ 0.92
SAFB-205ENST00000588852 KIAA1107Q9UPP5 1409 aa20.76■□□□□ 0.91
SAFB-205ENST00000588852 IFT140Q96RY7 1462 aa20.76■□□□□ 0.91
SAFB-205ENST00000588852 NUP155O75694 1391 aa20.75■□□□□ 0.91
SAFB-205ENST00000588852 CARD11Q9BXL7 1154 aa20.74■□□□□ 0.91
SAFB-205ENST00000588852 ERICH6BQ5W0A0 696 aa20.74■□□□□ 0.91
SAFB-205ENST00000588852 JPH4Q96JJ6 628 aa20.73■□□□□ 0.91
SAFB-205ENST00000588852 ST20-MTHFSA0A0A6YYL1 179 aa20.73■□□□□ 0.91
SAFB-205ENST00000588852 SALL2Q9Y467 1007 aaPredicted RBP20.73■□□□□ 0.91
SAFB-205ENST00000588852 ANKRD50Q9ULJ7 1429 aa20.72■□□□□ 0.91
SAFB-205ENST00000588852 HNRNPMP52272 730 aaKnown RBP eCLIP20.72■□□□□ 0.912e-8■■■■■ 28.4
SAFB-205ENST00000588852 ERICH6Q7L0X2 663 aa20.72■□□□□ 0.91
SAFB-205ENST00000588852 MBD5Q9P267 1494 aa20.72■□□□□ 0.91
SAFB-205ENST00000588852 DCAF11Q8TEB1 546 aa20.71■□□□□ 0.91
SAFB-205ENST00000588852 EIF4G3O43432 1585 aaKnown RBP20.71■□□□□ 0.91
SAFB-205ENST00000588852 ANKRD30AQ9BXX3 1397 aa20.7■□□□□ 0.9
SAFB-205ENST00000588852 TMC1Q8TDI8 760 aa20.7■□□□□ 0.9
SAFB-205ENST00000588852 PNISRQ8TF01 805 aaKnown RBP20.69■□□□□ 0.9
SAFB-205ENST00000588852 NUDCQ9Y266 331 aa20.68■□□□□ 0.9
SAFB-205ENST00000588852 CEP170Q5SW79 1584 aa20.68■□□□□ 0.9
SAFB-205ENST00000588852 PLEKHD1A6NEE1 506 aa20.68■□□□□ 0.9
SAFB-205ENST00000588852 POLR1AO95602 1720 aaPredicted RBP20.67■□□□□ 0.9
SAFB-205ENST00000588852 SMG6Q86US8 1419 aaKnown RBP20.65■□□□□ 0.9
SAFB-205ENST00000588852 KDM5CP41229 1560 aa20.65■□□□□ 0.9
SAFB-205ENST00000588852 RGL3Q3MIN7 710 aa20.64■□□□□ 0.89
SAFB-205ENST00000588852 CCDC136Q96JN2 1154 aa20.63■□□□□ 0.89
SAFB-205ENST00000588852 TSPY4P0CV99 314 aa20.63■□□□□ 0.89
SAFB-205ENST00000588852 TSPY10P0CW01 314 aa20.63■□□□□ 0.89
SAFB-205ENST00000588852 ADGRL2O95490 1459 aa20.62■□□□□ 0.89
SAFB-205ENST00000588852 C9orf84Q5VXU9 1444 aa20.62■□□□□ 0.89
SAFB-205ENST00000588852 ADGBQ8N7X0 1667 aa20.61■□□□□ 0.89
SAFB-205ENST00000588852 ITSN2Q9NZM3 1697 aa20.6■□□□□ 0.89
SAFB-205ENST00000588852 PAK3O75914 559 aaPredicted RBP20.59■□□□□ 0.89
SAFB-205ENST00000588852 NBPF1Q3BBV0 1214 aa20.59■□□□□ 0.89
SAFB-205ENST00000588852 ATP10BO94823 1461 aa20.58■□□□□ 0.88
SAFB-205ENST00000588852 CROCC2H7BZ55 1655 aa20.58■□□□□ 0.88
SAFB-205ENST00000588852 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.57■□□□□ 0.882e-7■■□□□ 13.3
SAFB-205ENST00000588852 KIF15Q9NS87 1388 aa20.57■□□□□ 0.88
SAFB-205ENST00000588852 CARMIL2Q6F5E8 1435 aa20.56■□□□□ 0.88
SAFB-205ENST00000588852 SYNJ2O15056 1496 aa20.56■□□□□ 0.88
SAFB-205ENST00000588852 RALGAPBQ86X10 1494 aa20.55■□□□□ 0.88
SAFB-205ENST00000588852 RNF123Q5XPI4 1314 aa20.55■□□□□ 0.88
SAFB-205ENST00000588852 CDC42BPAQ5VT25 1732 aa20.55■□□□□ 0.88
SAFB-205ENST00000588852 ROCK2O75116 1388 aaKnown RBP20.54■□□□□ 0.88
SAFB-205ENST00000588852 MAGI1Q96QZ7 1491 aaPredicted RBP20.54■□□□□ 0.88
SAFB-205ENST00000588852 UHRF1BP1Q6BDS2 1440 aa20.54■□□□□ 0.88
SAFB-205ENST00000588852 NBR1Q14596 966 aa20.53■□□□□ 0.88
SAFB-205ENST00000588852 ABCC10Q5T3U5 1492 aa20.53■□□□□ 0.88
SAFB-205ENST00000588852 ADCY10Q96PN6 1610 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms