RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 PREX2Q70Z35 1606 aa23.24■■□□□ 1.31
DDX39A-208ENST00000588692 POGZQ7Z3K3 1410 aa23.24■■□□□ 1.31
DDX39A-208ENST00000588692 SCAPERQ9BY12 1400 aa23.24■■□□□ 1.31
DDX39A-208ENST00000588692 CDC42BPBQ9Y5S2 1711 aa23.23■■□□□ 1.31
DDX39A-208ENST00000588692 MAGI2Q86UL8 1455 aa23.23■■□□□ 1.31
DDX39A-208ENST00000588692 ZFYVE16Q7Z3T8 1539 aa23.21■■□□□ 1.31
DDX39A-208ENST00000588692 CDC42BPAQ5VT25 1732 aa23.19■■□□□ 1.3
DDX39A-208ENST00000588692 ZNF518AQ6AHZ1 1483 aa23.16■■□□□ 1.3
DDX39A-208ENST00000588692 ADAMTSL3P82987 1691 aa23.16■■□□□ 1.3
DDX39A-208ENST00000588692 BCORL1Q5H9F3 1711 aa23.16■■□□□ 1.3
DDX39A-208ENST00000588692 KDM5CP41229 1560 aa23.14■■□□□ 1.3
DDX39A-208ENST00000588692 ABCC1P33527 1531 aa23.13■■□□□ 1.29
DDX39A-208ENST00000588692 YEATS2Q9ULM3 1422 aa23.13■■□□□ 1.29
DDX39A-208ENST00000588692 MTUS2Q5JR59 1369 aa23.12■■□□□ 1.29
DDX39A-208ENST00000588692 EHBP1L1Q8N3D4 1523 aa23.11■■□□□ 1.29
DDX39A-208ENST00000588692 ITSN2Q9NZM3 1697 aa23.11■■□□□ 1.29
DDX39A-208ENST00000588692 ARID4BQ4LE39 1312 aaPredicted RBP23.11■■□□□ 1.29
DDX39A-208ENST00000588692 LOC105371045A0A1W2PR82 267 aa23.1■■□□□ 1.29
DDX39A-208ENST00000588692 HECW2Q9P2P5 1572 aa23.09■■□□□ 1.29
DDX39A-208ENST00000588692 GPATCH8Q9UKJ3 1502 aaKnown RBP23.08■■□□□ 1.28
DDX39A-208ENST00000588692 MADDQ8WXG6 1647 aa23.07■■□□□ 1.28
DDX39A-208ENST00000588692 ATP10AO60312 1499 aa23.06■■□□□ 1.28
DDX39A-208ENST00000588692 SIGLEC1Q9BZZ2 1709 aa23.06■■□□□ 1.28
DDX39A-208ENST00000588692 VPS8Q8N3P4 1428 aa23.06■■□□□ 1.28
DDX39A-208ENST00000588692 C9orf84Q5VXU9 1444 aa23.05■■□□□ 1.28
DDX39A-208ENST00000588692 ARHGEF12Q9NZN5 1544 aa23.05■■□□□ 1.28
DDX39A-208ENST00000588692 SAMD9LQ8IVG5 1584 aa23.04■■□□□ 1.28
DDX39A-208ENST00000588692 CCNB3Q8WWL7 1395 aa23.04■■□□□ 1.28
DDX39A-208ENST00000588692 PTPRMP28827 1452 aa23.04■■□□□ 1.28
DDX39A-208ENST00000588692 MLH3Q9UHC1 1453 aa23.03■■□□□ 1.28
DDX39A-208ENST00000588692 AFAP1Q8N556 730 aa23.03■■□□□ 1.28
DDX39A-208ENST00000588692 TIAM1Q13009 1591 aa23.02■■□□□ 1.27
DDX39A-208ENST00000588692 TRAPPC8Q9Y2L5 1435 aa23.01■■□□□ 1.27
DDX39A-208ENST00000588692 DIP2CQ9Y2E4 1556 aa23.01■■□□□ 1.27
DDX39A-208ENST00000588692 PLEKHH2Q8IVE3 1493 aa23.01■■□□□ 1.27
DDX39A-208ENST00000588692 REREQ9P2R6 1566 aa23■■□□□ 1.27
DDX39A-208ENST00000588692 SYCP2Q9BX26 1530 aa23■■□□□ 1.27
DDX39A-208ENST00000588692 RIMS1Q86UR5 1692 aaKnown RBP22.99■■□□□ 1.27
DDX39A-208ENST00000588692 SUPT6HQ7KZ85 1726 aaKnown RBP22.99■■□□□ 1.27
DDX39A-208ENST00000588692 ABCA6Q8N139 1617 aa22.99■■□□□ 1.27
DDX39A-208ENST00000588692 KIAA1107Q9UPP5 1409 aa22.98■■□□□ 1.27
DDX39A-208ENST00000588692 CFDP1Q9UEE9 299 aaPredicted RBP22.98■■□□□ 1.27
DDX39A-208ENST00000588692 ZNF777Q9ULD5 760 aaPredicted RBP22.97■■□□□ 1.27
DDX39A-208ENST00000588692 FER1L4A9Z1Z3 1794 aa22.96■■□□□ 1.27
DDX39A-208ENST00000588692 KIDINS220Q9ULH0 1771 aa22.96■■□□□ 1.27
DDX39A-208ENST00000588692 MYT1LQ9UL68 1186 aa22.95■■□□□ 1.26
DDX39A-208ENST00000588692 MAP3K1Q13233 1512 aa22.94■■□□□ 1.26
DDX39A-208ENST00000588692 NCOA2Q15596 1464 aa22.92■■□□□ 1.26
DDX39A-208ENST00000588692 AGLP35573 1532 aa22.9■■□□□ 1.26
DDX39A-208ENST00000588692 LRRC9Q6ZRR7 1453 aa22.9■■□□□ 1.26
DDX39A-208ENST00000588692 INO80Q9ULG1 1556 aaPredicted RBP22.89■■□□□ 1.25
DDX39A-208ENST00000588692 MLECQ14165 292 aa22.88■■□□□ 1.25
DDX39A-208ENST00000588692 ATP7AQ04656 1500 aa22.88■■□□□ 1.25
DDX39A-208ENST00000588692 HNRNPMP52272 730 aaKnown RBP eCLIP22.87■■□□□ 1.256e-8■■■■□ 24.6
DDX39A-208ENST00000588692 SPAG9O60271 1321 aaKnown RBP22.87■■□□□ 1.25
DDX39A-208ENST00000588692 MBD5Q9P267 1494 aa22.83■■□□□ 1.25
DDX39A-208ENST00000588692 ZNF644Q9H582 1327 aaPredicted RBP22.82■■□□□ 1.24
DDX39A-208ENST00000588692 CAMSAP2Q08AD1 1489 aa22.81■■□□□ 1.24
DDX39A-208ENST00000588692 ADGBQ8N7X0 1667 aa22.79■■□□□ 1.24
DDX39A-208ENST00000588692 PLXNC1O60486 1568 aa22.79■■□□□ 1.24
DDX39A-208ENST00000588692 CCDC141Q6ZP82 1450 aa22.77■■□□□ 1.24
DDX39A-208ENST00000588692 LMTK3Q96Q04 1460 aa22.77■■□□□ 1.24
DDX39A-208ENST00000588692 RTEL1-TNFRSF6BF6WH68 1400 aa22.77■■□□□ 1.24
DDX39A-208ENST00000588692 A2MP01023 1474 aa22.76■■□□□ 1.23
DDX39A-208ENST00000588692 ARHGEF5Q12774 1597 aa22.76■■□□□ 1.23
DDX39A-208ENST00000588692 KANK4Q5T7N3 995 aaPredicted RBP22.75■■□□□ 1.23
DDX39A-208ENST00000588692 RSPH4AQ5TD94 716 aa22.74■■□□□ 1.23
DDX39A-208ENST00000588692 APLP2Q06481 763 aa22.73■■□□□ 1.23
DDX39A-208ENST00000588692 MYOM3Q5VTT5 1437 aa22.72■■□□□ 1.23
DDX39A-208ENST00000588692 CNTLNQ9NXG0 1405 aa22.72■■□□□ 1.23
DDX39A-208ENST00000588692 PREX1Q8TCU6 1659 aa22.72■■□□□ 1.23
DDX39A-208ENST00000588692 PLPPR3Q6T4P5 718 aa22.72■■□□□ 1.23
DDX39A-208ENST00000588692 MIA2Q96PC5 1412 aa22.72■■□□□ 1.23
DDX39A-208ENST00000588692 ESF1Q9H501 851 aaKnown RBP22.71■■□□□ 1.23
DDX39A-208ENST00000588692 C3P01024 1663 aa22.71■■□□□ 1.23
DDX39A-208ENST00000588692 MROH2AA6NES4 1674 aa22.7■■□□□ 1.22
DDX39A-208ENST00000588692 SETD1BQ9UPS6 1966 aaKnown RBP22.66■■□□□ 1.22
DDX39A-208ENST00000588692 CEBPAP49715 358 aaPredicted RBP22.66■■□□□ 1.22
DDX39A-208ENST00000588692 MAST1Q9Y2H9 1570 aa22.64■■□□□ 1.22
DDX39A-208ENST00000588692 DHX29Q7Z478 1369 aaKnown RBP22.64■■□□□ 1.21
DDX39A-208ENST00000588692 TSPY4P0CV99 314 aa22.62■■□□□ 1.21
DDX39A-208ENST00000588692 TSPY10P0CW01 314 aa22.62■■□□□ 1.21
DDX39A-208ENST00000588692 CLTCQ00610 1675 aaKnown RBP22.62■■□□□ 1.21
DDX39A-208ENST00000588692 UHRF1BP1Q6BDS2 1440 aa22.61■■□□□ 1.21
DDX39A-208ENST00000588692 PPP6R1Q9UPN7 881 aa22.6■■□□□ 1.21
DDX39A-208ENST00000588692 PTPN23Q9H3S7 1636 aa22.59■■□□□ 1.21
DDX39A-208ENST00000588692 HSPA2P54652 639 aa22.58■■□□□ 1.2
DDX39A-208ENST00000588692 FAM135AQ9P2D6 1515 aa22.58■■□□□ 1.2
DDX39A-208ENST00000588692 NPATQ14207 1427 aa22.58■■□□□ 1.2
DDX39A-208ENST00000588692 GGT6Q6P531 493 aa22.57■■□□□ 1.2
DDX39A-208ENST00000588692 ZMYM3Q14202 1370 aa22.56■■□□□ 1.2
DDX39A-208ENST00000588692 CROCC2H7BZ55 1655 aa22.56■■□□□ 1.2
DDX39A-208ENST00000588692 FGD6Q6ZV73 1430 aa22.55■■□□□ 1.2
DDX39A-208ENST00000588692 TCOF1Q13428 1488 aaKnown RBP22.54■■□□□ 1.2
DDX39A-208ENST00000588692 SHANK2Q9UPX8 1470 aa22.54■■□□□ 1.2
DDX39A-208ENST00000588692 EIF2AK4Q9P2K8 1649 aaKnown RBP22.52■■□□□ 1.2
DDX39A-208ENST00000588692 KDM5DQ9BY66 1539 aa22.51■■□□□ 1.19
DDX39A-208ENST00000588692 DNMT1P26358 1616 aaKnown RBP22.51■■□□□ 1.19
DDX39A-208ENST00000588692 KIF3BO15066 747 aa22.51■■□□□ 1.19
DDX39A-208ENST00000588692 RNF17Q9BXT8 1623 aaKnown RBP22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms