RNA–Protein interactions for RNA: ENST00000588275.2

LINC01842-201, Transcript of long intergenic non-protein coding RNA 1842, humanhuman

TSL 1 (best) BASIC

Gene LINC01842, Length 768 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01842-201ENST00000588275 PLPPR3Q6T4P5 718 aa27.66■■■□□ 2.02
LINC01842-201ENST00000588275 KIF14Q15058 1648 aa27.66■■■□□ 2.02
LINC01842-201ENST00000588275 POGZQ7Z3K3 1410 aa27.65■■■□□ 2.02
LINC01842-201ENST00000588275 SIGLEC1Q9BZZ2 1709 aa27.64■■■□□ 2.01
LINC01842-201ENST00000588275 MAGI2Q86UL8 1455 aa27.63■■■□□ 2.01
LINC01842-201ENST00000588275 PCF11O94913 1555 aaKnown RBP27.62■■■□□ 2.01
LINC01842-201ENST00000588275 MLECQ14165 292 aa27.61■■■□□ 2.01
LINC01842-201ENST00000588275 LRRIQ1Q96JM4 1722 aa27.61■■■□□ 2.01
LINC01842-201ENST00000588275 EFCAB2Q5VUJ9 269 aa27.6■■■□□ 2.01
LINC01842-201ENST00000588275 TROQ12816 1431 aaPredicted RBP27.59■■■□□ 2.01
LINC01842-201ENST00000588275 CLIP1P30622 1438 aa27.58■■■□□ 2.01
LINC01842-201ENST00000588275 ARHGAP5Q13017 1502 aa27.57■■■□□ 2
LINC01842-201ENST00000588275 LMTK3Q96Q04 1460 aa27.57■■■□□ 2
LINC01842-201ENST00000588275 FER1L4A9Z1Z3 1794 aa27.55■■■□□ 2
LINC01842-201ENST00000588275 ATP10AO60312 1499 aa27.51■■□□□ 1.99
LINC01842-201ENST00000588275 C9orf84Q5VXU9 1444 aa27.5■■□□□ 1.99
LINC01842-201ENST00000588275 MYT1LQ9UL68 1186 aa27.49■■□□□ 1.99
LINC01842-201ENST00000588275 ZNF518AQ6AHZ1 1483 aa27.49■■□□□ 1.99
LINC01842-201ENST00000588275 CCDC18Q5T9S5 1454 aa27.46■■□□□ 1.99
LINC01842-201ENST00000588275 HSPA2P54652 639 aa27.46■■□□□ 1.99
LINC01842-201ENST00000588275 CASKIN1Q8WXD9 1431 aa27.46■■□□□ 1.99
LINC01842-201ENST00000588275 CDC42BPBQ9Y5S2 1711 aa27.46■■□□□ 1.99
LINC01842-201ENST00000588275 AFAP1Q8N556 730 aa27.44■■□□□ 1.98
LINC01842-201ENST00000588275 KDM5CP41229 1560 aa27.43■■□□□ 1.98
LINC01842-201ENST00000588275 ARHGEF12Q9NZN5 1544 aa27.42■■□□□ 1.98
LINC01842-201ENST00000588275 PREX2Q70Z35 1606 aa27.42■■□□□ 1.98
LINC01842-201ENST00000588275 FBXO41Q8TF61 875 aa27.39■■□□□ 1.98
LINC01842-201ENST00000588275 DIP2CQ9Y2E4 1556 aa27.38■■□□□ 1.97
LINC01842-201ENST00000588275 ABCC1P33527 1531 aa27.36■■□□□ 1.97
LINC01842-201ENST00000588275 FYCO1Q9BQS8 1478 aa27.36■■□□□ 1.97
LINC01842-201ENST00000588275 ABCA6Q8N139 1617 aa27.35■■□□□ 1.97
LINC01842-201ENST00000588275 ITSN2Q9NZM3 1697 aa27.35■■□□□ 1.97
LINC01842-201ENST00000588275 CDC42BPAQ5VT25 1732 aa27.34■■□□□ 1.97
LINC01842-201ENST00000588275 CEBPAP49715 358 aaPredicted RBP27.33■■□□□ 1.97
LINC01842-201ENST00000588275 TRAPPC8Q9Y2L5 1435 aa27.33■■□□□ 1.96
LINC01842-201ENST00000588275 PREX1Q8TCU6 1659 aa27.31■■□□□ 1.96
LINC01842-201ENST00000588275 MLH3Q9UHC1 1453 aa27.3■■□□□ 1.96
LINC01842-201ENST00000588275 REREQ9P2R6 1566 aa27.28■■□□□ 1.96
LINC01842-201ENST00000588275 ZNF777Q9ULD5 760 aaPredicted RBP27.28■■□□□ 1.96
LINC01842-201ENST00000588275 KIDINS220Q9ULH0 1771 aa27.23■■□□□ 1.95
LINC01842-201ENST00000588275 ESF1Q9H501 851 aaKnown RBP27.22■■□□□ 1.95
LINC01842-201ENST00000588275 SAMD9LQ8IVG5 1584 aa27.22■■□□□ 1.95
LINC01842-201ENST00000588275 SYCP2Q9BX26 1530 aa27.21■■□□□ 1.95
LINC01842-201ENST00000588275 AGLP35573 1532 aa27.2■■□□□ 1.94
LINC01842-201ENST00000588275 UHRF1BP1Q6BDS2 1440 aa27.19■■□□□ 1.94
LINC01842-201ENST00000588275 GPATCH8Q9UKJ3 1502 aaKnown RBP27.19■■□□□ 1.94
LINC01842-201ENST00000588275 C3P01024 1663 aa27.18■■□□□ 1.94
LINC01842-201ENST00000588275 MTUS2Q5JR59 1369 aa27.14■■□□□ 1.94
LINC01842-201ENST00000588275 HNRNPMP52272 730 aaKnown RBP eCLIP27.14■■□□□ 1.94
LINC01842-201ENST00000588275 CCNB3Q8WWL7 1395 aa27.13■■□□□ 1.93
LINC01842-201ENST00000588275 SETD1BQ9UPS6 1966 aaKnown RBP27.13■■□□□ 1.93
LINC01842-201ENST00000588275 SPAG9O60271 1321 aaKnown RBP27.13■■□□□ 1.93
LINC01842-201ENST00000588275 CFDP1Q9UEE9 299 aaPredicted RBP27.12■■□□□ 1.93
LINC01842-201ENST00000588275 CERKQ8TCT0 537 aa27.11■■□□□ 1.93
LINC01842-201ENST00000588275 SUPT6HQ7KZ85 1726 aaKnown RBP27.1■■□□□ 1.93
LINC01842-201ENST00000588275 STRCQ7RTU9 1775 aa27.09■■□□□ 1.93
LINC01842-201ENST00000588275 ATP7AQ04656 1500 aa27.08■■□□□ 1.93
LINC01842-201ENST00000588275 CNTLNQ9NXG0 1405 aa27.07■■□□□ 1.92
LINC01842-201ENST00000588275 PLEKHH2Q8IVE3 1493 aa27.07■■□□□ 1.92
LINC01842-201ENST00000588275 KIAA1107Q9UPP5 1409 aa27.05■■□□□ 1.92
LINC01842-201ENST00000588275 INO80Q9ULG1 1556 aaPredicted RBP27.05■■□□□ 1.92
LINC01842-201ENST00000588275 DMRT2Q9Y5R5 561 aa27.04■■□□□ 1.92
LINC01842-201ENST00000588275 EHBP1L1Q8N3D4 1523 aa27.04■■□□□ 1.92
LINC01842-201ENST00000588275 TIAM1Q13009 1591 aa27.02■■□□□ 1.92
LINC01842-201ENST00000588275 MROH2AA6NES4 1674 aa27.01■■□□□ 1.91
LINC01842-201ENST00000588275 CEP162Q5TB80 1403 aa27■■□□□ 1.91
LINC01842-201ENST00000588275 A2MP01023 1474 aa27■■□□□ 1.91
LINC01842-201ENST00000588275 CLTCQ00610 1675 aaKnown RBP26.98■■□□□ 1.91
LINC01842-201ENST00000588275 PLXNC1O60486 1568 aa26.98■■□□□ 1.91
LINC01842-201ENST00000588275 ZNF644Q9H582 1327 aaPredicted RBP26.97■■□□□ 1.91
LINC01842-201ENST00000588275 ZMYM3Q14202 1370 aa26.96■■□□□ 1.91
LINC01842-201ENST00000588275 GGT6Q6P531 493 aa26.94■■□□□ 1.9
LINC01842-201ENST00000588275 ADGBQ8N7X0 1667 aa26.94■■□□□ 1.9
LINC01842-201ENST00000588275 NPATQ14207 1427 aa26.92■■□□□ 1.9
LINC01842-201ENST00000588275 PTPRTO14522 1441 aa26.91■■□□□ 1.9
LINC01842-201ENST00000588275 NCOA1Q15788 1441 aa26.9■■□□□ 1.9
LINC01842-201ENST00000588275 CAMSAP1Q5T5Y3 1602 aa26.89■■□□□ 1.9
LINC01842-201ENST00000588275 MBD5Q9P267 1494 aa26.88■■□□□ 1.89
LINC01842-201ENST00000588275 MYO3AQ8NEV4 1616 aa26.87■■□□□ 1.89
LINC01842-201ENST00000588275 NCOA2Q15596 1464 aa26.86■■□□□ 1.89
LINC01842-201ENST00000588275 PTPRKQ15262 1439 aa26.82■■□□□ 1.88
LINC01842-201ENST00000588275 CAMSAP2Q08AD1 1489 aa26.82■■□□□ 1.88
LINC01842-201ENST00000588275 ZNF142P52746 1687 aaPredicted RBP26.82■■□□□ 1.88
LINC01842-201ENST00000588275 RTEL1-TNFRSF6BF6WH68 1400 aa26.82■■□□□ 1.88
LINC01842-201ENST00000588275 CCDC141Q6ZP82 1450 aa26.81■■□□□ 1.88
LINC01842-201ENST00000588275 CEP170BQ9Y4F5 1589 aaPredicted RBP26.8■■□□□ 1.88
LINC01842-201ENST00000588275 NCKAP5LQ9HCH0 1330 aa26.79■■□□□ 1.88
LINC01842-201ENST00000588275 DHX29Q7Z478 1369 aaKnown RBP26.78■■□□□ 1.88
LINC01842-201ENST00000588275 LTBP4Q8N2S1 1624 aa26.78■■□□□ 1.88
LINC01842-201ENST00000588275 PPP6R1Q9UPN7 881 aa26.77■■□□□ 1.88
LINC01842-201ENST00000588275 KIF3BO15066 747 aa26.74■■□□□ 1.87
LINC01842-201ENST00000588275 LOC105371045A0A1W2PR82 267 aa26.72■■□□□ 1.87
LINC01842-201ENST00000588275 PLA2R1Q13018 1463 aa26.72■■□□□ 1.87
LINC01842-201ENST00000588275 VPS8Q8N3P4 1428 aa26.72■■□□□ 1.87
LINC01842-201ENST00000588275 RSPH4AQ5TD94 716 aa26.69■■□□□ 1.86
LINC01842-201ENST00000588275 KDM5DQ9BY66 1539 aa26.69■■□□□ 1.86
LINC01842-201ENST00000588275 LRRC9Q6ZRR7 1453 aa26.68■■□□□ 1.86
LINC01842-201ENST00000588275 ARHGEF5Q12774 1597 aa26.68■■□□□ 1.86
LINC01842-201ENST00000588275 PKD2Q13563 968 aa26.68■■□□□ 1.86
LINC01842-201ENST00000588275 A2ML1A8K2U0 1454 aa26.68■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms