RNA–Protein interactions for RNA: ENST00000588261.1

HDAC5-207, Transcript of histone deacetylase 5, humanhuman

TSL 3

Gene HDAC5, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-207ENST00000588261 FBXO41Q8TF61 875 aa24.03■■□□□ 1.44
HDAC5-207ENST00000588261 ZFYVE16Q7Z3T8 1539 aa24.02■■□□□ 1.44
HDAC5-207ENST00000588261 TROQ12816 1431 aaPredicted RBP24.01■■□□□ 1.43
HDAC5-207ENST00000588261 PCF11O94913 1555 aaKnown RBP23.99■■□□□ 1.43
HDAC5-207ENST00000588261 MYO5CQ9NQX4 1742 aa23.98■■□□□ 1.43
HDAC5-207ENST00000588261 MAGI2Q86UL8 1455 aa23.97■■□□□ 1.43
HDAC5-207ENST00000588261 RIMS1Q86UR5 1692 aaKnown RBP23.97■■□□□ 1.43
HDAC5-207ENST00000588261 LMTK3Q96Q04 1460 aa23.94■■□□□ 1.42
HDAC5-207ENST00000588261 CASKIN1Q8WXD9 1431 aa23.94■■□□□ 1.42
HDAC5-207ENST00000588261 EFCAB2Q5VUJ9 269 aa23.92■■□□□ 1.42
HDAC5-207ENST00000588261 CDK11AQ9UQ88 783 aaPredicted RBP23.91■■□□□ 1.42
HDAC5-207ENST00000588261 KDM5CP41229 1560 aa23.89■■□□□ 1.41
HDAC5-207ENST00000588261 CDC42BPBQ9Y5S2 1711 aa23.89■■□□□ 1.41
HDAC5-207ENST00000588261 ARHGAP5Q13017 1502 aa23.89■■□□□ 1.41
HDAC5-207ENST00000588261 LOC105371045A0A1W2PR82 267 aa23.88■■□□□ 1.41
HDAC5-207ENST00000588261 AFAP1Q8N556 730 aa23.88■■□□□ 1.41
HDAC5-207ENST00000588261 ARHGEF12Q9NZN5 1544 aa23.88■■□□□ 1.41
HDAC5-207ENST00000588261 ATP10AO60312 1499 aa23.87■■□□□ 1.41
HDAC5-207ENST00000588261 CLIP1P30622 1438 aa23.86■■□□□ 1.41
HDAC5-207ENST00000588261 MLECQ14165 292 aa23.86■■□□□ 1.41
HDAC5-207ENST00000588261 C9orf84Q5VXU9 1444 aa23.85■■□□□ 1.41
HDAC5-207ENST00000588261 CEP162Q5TB80 1403 aa23.84■■□□□ 1.41
HDAC5-207ENST00000588261 CCDC18Q5T9S5 1454 aa23.84■■□□□ 1.41
HDAC5-207ENST00000588261 ZNF518AQ6AHZ1 1483 aa23.84■■□□□ 1.41
HDAC5-207ENST00000588261 PREX2Q70Z35 1606 aa23.84■■□□□ 1.41
HDAC5-207ENST00000588261 TRAPPC8Q9Y2L5 1435 aa23.82■■□□□ 1.4
HDAC5-207ENST00000588261 DIP2CQ9Y2E4 1556 aa23.82■■□□□ 1.4
HDAC5-207ENST00000588261 FYCO1Q9BQS8 1478 aa23.81■■□□□ 1.4
HDAC5-207ENST00000588261 ABCC1P33527 1531 aa23.81■■□□□ 1.4
HDAC5-207ENST00000588261 FER1L4A9Z1Z3 1794 aa23.8■■□□□ 1.4
HDAC5-207ENST00000588261 PLPPR3Q6T4P5 718 aa23.8■■□□□ 1.4
HDAC5-207ENST00000588261 HSPA2P54652 639 aa23.79■■□□□ 1.4
HDAC5-207ENST00000588261 ABCA6Q8N139 1617 aa23.78■■□□□ 1.4
HDAC5-207ENST00000588261 CDC42BPAQ5VT25 1732 aa23.78■■□□□ 1.4
HDAC5-207ENST00000588261 MLH3Q9UHC1 1453 aa23.76■■□□□ 1.39
HDAC5-207ENST00000588261 ITSN2Q9NZM3 1697 aa23.76■■□□□ 1.39
HDAC5-207ENST00000588261 REREQ9P2R6 1566 aa23.74■■□□□ 1.39
HDAC5-207ENST00000588261 CEBPAP49715 358 aaPredicted RBP23.73■■□□□ 1.39
HDAC5-207ENST00000588261 GPATCH8Q9UKJ3 1502 aaKnown RBP23.72■■□□□ 1.39
HDAC5-207ENST00000588261 SAMD9LQ8IVG5 1584 aa23.71■■□□□ 1.39
HDAC5-207ENST00000588261 KIDINS220Q9ULH0 1771 aa23.7■■□□□ 1.39
HDAC5-207ENST00000588261 SETD1BQ9UPS6 1966 aaKnown RBP23.67■■□□□ 1.38
HDAC5-207ENST00000588261 AGLP35573 1532 aa23.66■■□□□ 1.38
HDAC5-207ENST00000588261 SYCP2Q9BX26 1530 aa23.65■■□□□ 1.38
HDAC5-207ENST00000588261 PREX1Q8TCU6 1659 aa23.64■■□□□ 1.38
HDAC5-207ENST00000588261 CERKQ8TCT0 537 aa23.63■■□□□ 1.37
HDAC5-207ENST00000588261 MYT1LQ9UL68 1186 aa23.61■■□□□ 1.37
HDAC5-207ENST00000588261 ZNF777Q9ULD5 760 aaPredicted RBP23.61■■□□□ 1.37
HDAC5-207ENST00000588261 HNRNPMP52272 730 aaKnown RBP eCLIP23.6■■□□□ 1.37
HDAC5-207ENST00000588261 DMRT2Q9Y5R5 561 aa23.59■■□□□ 1.37
HDAC5-207ENST00000588261 C3P01024 1663 aa23.58■■□□□ 1.37
HDAC5-207ENST00000588261 VPS8Q8N3P4 1428 aa23.57■■□□□ 1.36
HDAC5-207ENST00000588261 KIAA1107Q9UPP5 1409 aa23.56■■□□□ 1.36
HDAC5-207ENST00000588261 TIAM1Q13009 1591 aa23.56■■□□□ 1.36
HDAC5-207ENST00000588261 INO80Q9ULG1 1556 aaPredicted RBP23.55■■□□□ 1.36
HDAC5-207ENST00000588261 ZNF644Q9H582 1327 aaPredicted RBP23.55■■□□□ 1.36
HDAC5-207ENST00000588261 STRCQ7RTU9 1775 aa23.54■■□□□ 1.36
HDAC5-207ENST00000588261 MTUS2Q5JR59 1369 aa23.53■■□□□ 1.36
HDAC5-207ENST00000588261 CCNB3Q8WWL7 1395 aa23.53■■□□□ 1.36
HDAC5-207ENST00000588261 CFDP1Q9UEE9 299 aaPredicted RBP23.53■■□□□ 1.36
HDAC5-207ENST00000588261 ATP7AQ04656 1500 aa23.53■■□□□ 1.36
HDAC5-207ENST00000588261 PLXNC1O60486 1568 aa23.52■■□□□ 1.36
HDAC5-207ENST00000588261 SPAG9O60271 1321 aaKnown RBP23.51■■□□□ 1.35
HDAC5-207ENST00000588261 UHRF1BP1Q6BDS2 1440 aa23.5■■□□□ 1.35
HDAC5-207ENST00000588261 MBD5Q9P267 1494 aa23.5■■□□□ 1.35
HDAC5-207ENST00000588261 ESF1Q9H501 851 aaKnown RBP23.5■■□□□ 1.35
HDAC5-207ENST00000588261 EHBP1L1Q8N3D4 1523 aa23.49■■□□□ 1.35
HDAC5-207ENST00000588261 PLEKHH2Q8IVE3 1493 aa23.48■■□□□ 1.35
HDAC5-207ENST00000588261 SUPT6HQ7KZ85 1726 aaKnown RBP23.47■■□□□ 1.35
HDAC5-207ENST00000588261 A2MP01023 1474 aa23.45■■□□□ 1.34
HDAC5-207ENST00000588261 CNTLNQ9NXG0 1405 aa23.44■■□□□ 1.34
HDAC5-207ENST00000588261 ZMYM3Q14202 1370 aa23.41■■□□□ 1.34
HDAC5-207ENST00000588261 MROH2AA6NES4 1674 aa23.41■■□□□ 1.34
HDAC5-207ENST00000588261 NCOA2Q15596 1464 aa23.4■■□□□ 1.34
HDAC5-207ENST00000588261 MAP3K1Q13233 1512 aa23.39■■□□□ 1.34
HDAC5-207ENST00000588261 PTPRTO14522 1441 aa23.38■■□□□ 1.33
HDAC5-207ENST00000588261 CLTCQ00610 1675 aaKnown RBP23.38■■□□□ 1.33
HDAC5-207ENST00000588261 NPATQ14207 1427 aa23.37■■□□□ 1.33
HDAC5-207ENST00000588261 NCOA1Q15788 1441 aa23.35■■□□□ 1.33
HDAC5-207ENST00000588261 ADGBQ8N7X0 1667 aa23.35■■□□□ 1.33
HDAC5-207ENST00000588261 PTPRKQ15262 1439 aa23.34■■□□□ 1.33
HDAC5-207ENST00000588261 CAMSAP2Q08AD1 1489 aa23.34■■□□□ 1.33
HDAC5-207ENST00000588261 RTEL1-TNFRSF6BF6WH68 1400 aa23.33■■□□□ 1.33
HDAC5-207ENST00000588261 GGT6Q6P531 493 aa23.32■■□□□ 1.32
HDAC5-207ENST00000588261 CCDC141Q6ZP82 1450 aa23.3■■□□□ 1.32
HDAC5-207ENST00000588261 CAMSAP1Q5T5Y3 1602 aa23.3■■□□□ 1.32
HDAC5-207ENST00000588261 LTBP4Q8N2S1 1624 aa23.3■■□□□ 1.32
HDAC5-207ENST00000588261 DHX29Q7Z478 1369 aaKnown RBP23.29■■□□□ 1.32
HDAC5-207ENST00000588261 DISP3Q9P2K9 1392 aa23.29■■□□□ 1.32
HDAC5-207ENST00000588261 MYO3AQ8NEV4 1616 aa23.29■■□□□ 1.32
HDAC5-207ENST00000588261 LRRC9Q6ZRR7 1453 aa23.28■■□□□ 1.32
HDAC5-207ENST00000588261 ZNF142P52746 1687 aaPredicted RBP23.26■■□□□ 1.31
HDAC5-207ENST00000588261 KANK4Q5T7N3 995 aaPredicted RBP23.26■■□□□ 1.31
HDAC5-207ENST00000588261 IQSEC2Q5JU85 1478 aa23.25■■□□□ 1.31
HDAC5-207ENST00000588261 ARHGEF5Q12774 1597 aa23.23■■□□□ 1.31
HDAC5-207ENST00000588261 CEP170BQ9Y4F5 1589 aaPredicted RBP23.23■■□□□ 1.31
HDAC5-207ENST00000588261 APLP2Q06481 763 aa23.23■■□□□ 1.31
HDAC5-207ENST00000588261 NCKAP5LQ9HCH0 1330 aa23.23■■□□□ 1.31
HDAC5-207ENST00000588261 PPP6R1Q9UPN7 881 aa23.21■■□□□ 1.31
HDAC5-207ENST00000588261 TCOF1Q13428 1488 aaKnown RBP23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms