RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 ADGRL1O94910 1474 aa15.95■□□□□ 0.14
TPM4-207ENST00000588032 SCAPERQ9BY12 1400 aa15.94■□□□□ 0.14
TPM4-207ENST00000588032 ARHGAP5Q13017 1502 aa15.94■□□□□ 0.14
TPM4-207ENST00000588032 MSH5O43196 834 aa15.93■□□□□ 0.14
TPM4-207ENST00000588032 MAP3K1Q13233 1512 aa15.93■□□□□ 0.14
TPM4-207ENST00000588032 EHBP1L1Q8N3D4 1523 aa15.93■□□□□ 0.14
TPM4-207ENST00000588032 CCNB3Q8WWL7 1395 aa15.92■□□□□ 0.14
TPM4-207ENST00000588032 APLP2Q06481 763 aa15.92■□□□□ 0.14
TPM4-207ENST00000588032 GPATCH8Q9UKJ3 1502 aaKnown RBP15.91■□□□□ 0.14
TPM4-207ENST00000588032 CFDP1Q9UEE9 299 aaPredicted RBP15.9■□□□□ 0.14
TPM4-207ENST00000588032 TIAM1Q13009 1591 aa15.9■□□□□ 0.14
TPM4-207ENST00000588032 PREX2Q70Z35 1606 aa15.9■□□□□ 0.14
TPM4-207ENST00000588032 MAGI2Q86UL8 1455 aa15.89■□□□□ 0.13
TPM4-207ENST00000588032 CDC42BPBQ9Y5S2 1711 aa15.88■□□□□ 0.13
TPM4-207ENST00000588032 FRMPD1Q5SYB0 1578 aa15.88■□□□□ 0.13
TPM4-207ENST00000588032 POGZQ7Z3K3 1410 aa15.88■□□□□ 0.13
TPM4-207ENST00000588032 RICTORQ6R327 1708 aa15.88■□□□□ 0.13
TPM4-207ENST00000588032 ZNF518AQ6AHZ1 1483 aa15.86■□□□□ 0.13
TPM4-207ENST00000588032 LRRC9Q6ZRR7 1453 aa15.86■□□□□ 0.13
TPM4-207ENST00000588032 CDC42BPAQ5VT25 1732 aa15.86■□□□□ 0.13
TPM4-207ENST00000588032 ZMYM4Q5VZL5 1548 aa15.86■□□□□ 0.13
TPM4-207ENST00000588032 KDM4FA0A1W2PPD8 638 aa15.86■□□□□ 0.13
TPM4-207ENST00000588032 ZNF777Q9ULD5 760 aaPredicted RBP15.86■□□□□ 0.13
TPM4-207ENST00000588032 AFAP1Q8N556 730 aa15.85■□□□□ 0.13
TPM4-207ENST00000588032 PLEKHH2Q8IVE3 1493 aa15.84■□□□□ 0.13
TPM4-207ENST00000588032 KIAA1107Q9UPP5 1409 aa15.84■□□□□ 0.13
TPM4-207ENST00000588032 NCOA2Q15596 1464 aa15.84■□□□□ 0.13
TPM4-207ENST00000588032 SUPT6HQ7KZ85 1726 aaKnown RBP15.83■□□□□ 0.13
TPM4-207ENST00000588032 KANK4Q5T7N3 995 aaPredicted RBP15.83■□□□□ 0.12
TPM4-207ENST00000588032 ABCC1P33527 1531 aa15.82■□□□□ 0.12
TPM4-207ENST00000588032 ZFYVE16Q7Z3T8 1539 aa15.81■□□□□ 0.12
TPM4-207ENST00000588032 ARHGEF12Q9NZN5 1544 aa15.8■□□□□ 0.12
TPM4-207ENST00000588032 TRAPPC8Q9Y2L5 1435 aa15.8■□□□□ 0.12
TPM4-207ENST00000588032 MYT1LQ9UL68 1186 aa15.8■□□□□ 0.12
TPM4-207ENST00000588032 ITSN2Q9NZM3 1697 aa15.79■□□□□ 0.12
TPM4-207ENST00000588032 KDM5CP41229 1560 aa15.79■□□□□ 0.12
TPM4-207ENST00000588032 ARHGEF40Q8TER5 1519 aa15.79■□□□□ 0.12
TPM4-207ENST00000588032 MLH3Q9UHC1 1453 aa15.79■□□□□ 0.12
TPM4-207ENST00000588032 YEATS2Q9ULM3 1422 aa15.79■□□□□ 0.12
TPM4-207ENST00000588032 ARID4BQ4LE39 1312 aaPredicted RBP15.79■□□□□ 0.12
TPM4-207ENST00000588032 HNRNPMP52272 730 aaKnown RBP eCLIP15.79■□□□□ 0.12
TPM4-207ENST00000588032 RSPH4AQ5TD94 716 aa15.79■□□□□ 0.12
TPM4-207ENST00000588032 SAMD9LQ8IVG5 1584 aa15.79■□□□□ 0.12
TPM4-207ENST00000588032 ATP10AO60312 1499 aa15.78■□□□□ 0.12
TPM4-207ENST00000588032 ZNF644Q9H582 1327 aaPredicted RBP15.76■□□□□ 0.11
TPM4-207ENST00000588032 SPAG9O60271 1321 aaKnown RBP15.75■□□□□ 0.11
TPM4-207ENST00000588032 SYCP2Q9BX26 1530 aa15.75■□□□□ 0.11
TPM4-207ENST00000588032 C9orf84Q5VXU9 1444 aa15.75■□□□□ 0.11
TPM4-207ENST00000588032 HECW2Q9P2P5 1572 aa15.75■□□□□ 0.11
TPM4-207ENST00000588032 MIA2Q96PC5 1412 aa15.74■□□□□ 0.11
TPM4-207ENST00000588032 MYOM3Q5VTT5 1437 aa15.73■□□□□ 0.11
TPM4-207ENST00000588032 MBD5Q9P267 1494 aa15.72■□□□□ 0.11
TPM4-207ENST00000588032 CAMSAP2Q08AD1 1489 aa15.7■□□□□ 0.1
TPM4-207ENST00000588032 RTEL1-TNFRSF6BF6WH68 1400 aa15.69■□□□□ 0.1
TPM4-207ENST00000588032 REREQ9P2R6 1566 aa15.69■□□□□ 0.1
TPM4-207ENST00000588032 DIP2CQ9Y2E4 1556 aa15.68■□□□□ 0.1
TPM4-207ENST00000588032 TSPY4P0CV99 314 aa15.68■□□□□ 0.1
TPM4-207ENST00000588032 TSPY10P0CW01 314 aa15.68■□□□□ 0.1
TPM4-207ENST00000588032 BCORL1Q5H9F3 1711 aa15.68■□□□□ 0.1
TPM4-207ENST00000588032 KIDINS220Q9ULH0 1771 aa15.67■□□□□ 0.1
TPM4-207ENST00000588032 ADAMTSL3P82987 1691 aa15.67■□□□□ 0.1
TPM4-207ENST00000588032 ATP7AQ04656 1500 aa15.67■□□□□ 0.1
TPM4-207ENST00000588032 CCDC141Q6ZP82 1450 aa15.66■□□□□ 0.1
TPM4-207ENST00000588032 ABCA6Q8N139 1617 aa15.65■□□□□ 0.1
TPM4-207ENST00000588032 AGLP35573 1532 aa15.65■□□□□ 0.1
TPM4-207ENST00000588032 MLECQ14165 292 aa15.65■□□□□ 0.1
TPM4-207ENST00000588032 ARHGEF5Q12774 1597 aa15.65■□□□□ 0.1
TPM4-207ENST00000588032 INO80Q9ULG1 1556 aaPredicted RBP15.64■□□□□ 0.09
TPM4-207ENST00000588032 FGD6Q6ZV73 1430 aa15.62■□□□□ 0.09
TPM4-207ENST00000588032 A2MP01023 1474 aa15.62■□□□□ 0.09
TPM4-207ENST00000588032 PTPRMP28827 1452 aa15.62■□□□□ 0.09
TPM4-207ENST00000588032 SIGLEC1Q9BZZ2 1709 aa15.62■□□□□ 0.09
TPM4-207ENST00000588032 ESF1Q9H501 851 aaKnown RBP15.6■□□□□ 0.09
TPM4-207ENST00000588032 MADDQ8WXG6 1647 aa15.6■□□□□ 0.09
TPM4-207ENST00000588032 DHX29Q7Z478 1369 aaKnown RBP15.6■□□□□ 0.09
TPM4-207ENST00000588032 TCOF1Q13428 1488 aaKnown RBP15.59■□□□□ 0.09
TPM4-207ENST00000588032 PPP6R1Q9UPN7 881 aa15.59■□□□□ 0.09
TPM4-207ENST00000588032 PTPN23Q9H3S7 1636 aa15.58■□□□□ 0.09
TPM4-207ENST00000588032 ADGBQ8N7X0 1667 aa15.57■□□□□ 0.08
TPM4-207ENST00000588032 PLXNC1O60486 1568 aa15.56■□□□□ 0.08
TPM4-207ENST00000588032 MAST1Q9Y2H9 1570 aa15.56■□□□□ 0.08
TPM4-207ENST00000588032 ABCC5O15440 1437 aa15.55■□□□□ 0.08
TPM4-207ENST00000588032 RIMS1Q86UR5 1692 aaKnown RBP15.54■□□□□ 0.08
TPM4-207ENST00000588032 CNTLNQ9NXG0 1405 aa15.54■□□□□ 0.08
TPM4-207ENST00000588032 FAM50AQ14320 339 aaKnown RBP15.54■□□□□ 0.08
TPM4-207ENST00000588032 SHANK2Q9UPX8 1470 aa15.53■□□□□ 0.08
TPM4-207ENST00000588032 DAPK1P53355 1430 aa15.53■□□□□ 0.08
TPM4-207ENST00000588032 GGT6Q6P531 493 aa15.53■□□□□ 0.08
TPM4-207ENST00000588032 FER1L4A9Z1Z3 1794 aa15.53■□□□□ 0.08
TPM4-207ENST00000588032 KIF3BO15066 747 aa15.52■□□□□ 0.08
TPM4-207ENST00000588032 PPARGC1BQ86YN6 1023 aaKnown RBP15.51■□□□□ 0.07
TPM4-207ENST00000588032 DNMT1P26358 1616 aaKnown RBP15.5■□□□□ 0.07
TPM4-207ENST00000588032 ANKRD30AQ9BXX3 1397 aa15.49■□□□□ 0.07
TPM4-207ENST00000588032 PLPPR3Q6T4P5 718 aa15.49■□□□□ 0.07
TPM4-207ENST00000588032 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.49■□□□□ 0.07
TPM4-207ENST00000588032 CEBPAP49715 358 aaPredicted RBP15.48■□□□□ 0.07
TPM4-207ENST00000588032 RRP7BPQ9NSQ0 103 aa15.48■□□□□ 0.07
TPM4-207ENST00000588032 DUOX2Q9NRD8 1548 aa15.47■□□□□ 0.07
TPM4-207ENST00000588032 ZMYM3Q14202 1370 aa15.47■□□□□ 0.07
TPM4-207ENST00000588032 KIF15Q9NS87 1388 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms