RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 CDK13Q14004 1512 aaKnown RBP25.78■■□□□ 1.72
DDX39A-206ENST00000587730 DAPK1P53355 1430 aa25.78■■□□□ 1.72
DDX39A-206ENST00000587730 DNMT1P26358 1616 aaKnown RBP25.77■■□□□ 1.72
DDX39A-206ENST00000587730 RPRD2Q5VT52 1461 aaKnown RBP25.77■■□□□ 1.72
DDX39A-206ENST00000587730 WASHC2AQ641Q2 1341 aa25.77■■□□□ 1.72
DDX39A-206ENST00000587730 CDK11AQ9UQ88 783 aaPredicted RBP25.77■■□□□ 1.72
DDX39A-206ENST00000587730 BCANQ96GW7 911 aa25.76■■□□□ 1.71
DDX39A-206ENST00000587730 CHIC2Q9UKJ5 165 aa25.76■■□□□ 1.71
DDX39A-206ENST00000587730 GRIN2AQ12879 1464 aa25.74■■□□□ 1.71
DDX39A-206ENST00000587730 NCOA1Q15788 1441 aa25.74■■□□□ 1.71
DDX39A-206ENST00000587730 ANP32EQ9BTT0 268 aa25.73■■□□□ 1.71
DDX39A-206ENST00000587730 KDM6BO15054 1643 aa25.73■■□□□ 1.71
DDX39A-206ENST00000587730 KIAA0556O60303 1618 aa25.73■■□□□ 1.71
DDX39A-206ENST00000587730 ANKRD30BQ9BXX2 1392 aa25.73■■□□□ 1.71
DDX39A-206ENST00000587730 ABCC5O15440 1437 aa25.69■■□□□ 1.7
DDX39A-206ENST00000587730 HNRNPUQ00839 825 aaKnown RBP eCLIP25.69■■□□□ 1.7
DDX39A-206ENST00000587730 L3MBTL2Q969R5 705 aa25.68■■□□□ 1.7
DDX39A-206ENST00000587730 CCDC7Q96M83 1385 aa25.67■■□□□ 1.7
DDX39A-206ENST00000587730 RAPGEF6Q8TEU7 1601 aa25.67■■□□□ 1.7
DDX39A-206ENST00000587730 TEX14Q8IWB6 1497 aa25.67■■□□□ 1.7
DDX39A-206ENST00000587730 DISP1Q96F81 1524 aa25.66■■□□□ 1.7
DDX39A-206ENST00000587730 NUP153P49790 1475 aaKnown RBP25.65■■□□□ 1.7
DDX39A-206ENST00000587730 CEP170Q5SW79 1584 aa25.63■■□□□ 1.69
DDX39A-206ENST00000587730 ITSN2Q9NZM3 1697 aa25.62■■□□□ 1.69
DDX39A-206ENST00000587730 POLR1AO95602 1720 aaPredicted RBP25.6■■□□□ 1.69
DDX39A-206ENST00000587730 TROQ12816 1431 aaPredicted RBP25.6■■□□□ 1.69
DDX39A-206ENST00000587730 NUP160Q12769 1436 aa25.58■■□□□ 1.69
DDX39A-206ENST00000587730 SPATA31E1Q6ZUB1 1445 aa25.58■■□□□ 1.69
DDX39A-206ENST00000587730 PRKRIP1Q9H875 184 aaPredicted RBP25.58■■□□□ 1.68
DDX39A-206ENST00000587730 RBM19Q9Y4C8 960 aaKnown RBP25.58■■□□□ 1.68
DDX39A-206ENST00000587730 ADGRL2O95490 1459 aa25.58■■□□□ 1.68
DDX39A-206ENST00000587730 ADGBQ8N7X0 1667 aa25.56■■□□□ 1.68
DDX39A-206ENST00000587730 SLC4A1APQ9BWU0 796 aaKnown RBP25.56■■□□□ 1.68
DDX39A-206ENST00000587730 ADCY10Q96PN6 1610 aa25.55■■□□□ 1.68
DDX39A-206ENST00000587730 ARID4BQ4LE39 1312 aaPredicted RBP25.53■■□□□ 1.68
DDX39A-206ENST00000587730 ZBED9Q6R2W3 1325 aa25.53■■□□□ 1.68
DDX39A-206ENST00000587730 CAMSAP2Q08AD1 1489 aa25.52■■□□□ 1.68
DDX39A-206ENST00000587730 PZPP20742 1482 aa25.5■■□□□ 1.67
DDX39A-206ENST00000587730 KIAA1107Q9UPP5 1409 aa25.49■■□□□ 1.67
DDX39A-206ENST00000587730 MBD5Q9P267 1494 aa25.48■■□□□ 1.67
DDX39A-206ENST00000587730 NBPF8Q3BBV2 869 aa25.48■■□□□ 1.67
DDX39A-206ENST00000587730 PPP4R2Q9NY27 417 aa25.47■■□□□ 1.67
DDX39A-206ENST00000587730 CFDP1Q9UEE9 299 aaPredicted RBP25.47■■□□□ 1.67
DDX39A-206ENST00000587730 ANKRD30AQ9BXX3 1397 aa25.47■■□□□ 1.67
DDX39A-206ENST00000587730 KIF7Q2M1P5 1343 aa25.47■■□□□ 1.67
DDX39A-206ENST00000587730 MRS2Q9HD23 443 aa25.47■■□□□ 1.67
DDX39A-206ENST00000587730 CLASP1Q7Z460 1538 aa25.46■■□□□ 1.67
DDX39A-206ENST00000587730 CROCC2H7BZ55 1655 aa25.46■■□□□ 1.67
DDX39A-206ENST00000587730 GPATCH8Q9UKJ3 1502 aaKnown RBP25.46■■□□□ 1.67
DDX39A-206ENST00000587730 CARMIL2Q6F5E8 1435 aa25.45■■□□□ 1.67
DDX39A-206ENST00000587730 FOXD1Q16676 465 aa25.45■■□□□ 1.66
DDX39A-206ENST00000587730 SHANK2Q9UPX8 1470 aa25.44■■□□□ 1.66
DDX39A-206ENST00000587730 RIMBP3CA6NJZ7 1639 aa25.43■■□□□ 1.66
DDX39A-206ENST00000587730 RIMBP3BA6NNM3 1639 aa25.43■■□□□ 1.66
DDX39A-206ENST00000587730 RIMBP3Q9UFD9 1639 aa25.43■■□□□ 1.66
DDX39A-206ENST00000587730 C11orf95C9JLR9 678 aaPredicted RBP25.43■■□□□ 1.66
DDX39A-206ENST00000587730 ZNF644Q9H582 1327 aaPredicted RBP25.43■■□□□ 1.66
DDX39A-206ENST00000587730 FANCIQ9NVI1 1328 aa25.43■■□□□ 1.66
DDX39A-206ENST00000587730 KIF14Q15058 1648 aa25.42■■□□□ 1.66
DDX39A-206ENST00000587730 ARID3CA6NKF2 412 aa25.42■■□□□ 1.66
DDX39A-206ENST00000587730 PRG4Q92954 1404 aaPredicted RBP25.41■■□□□ 1.66
DDX39A-206ENST00000587730 ROCK2O75116 1388 aaKnown RBP25.41■■□□□ 1.66
DDX39A-206ENST00000587730 JPH4Q96JJ6 628 aa25.38■■□□□ 1.65
DDX39A-206ENST00000587730 ARHGEF12Q9NZN5 1544 aa25.38■■□□□ 1.65
DDX39A-206ENST00000587730 UHRF1BP1Q6BDS2 1440 aa25.38■■□□□ 1.65
DDX39A-206ENST00000587730 USP47Q96K76 1375 aa25.34■■□□□ 1.65
DDX39A-206ENST00000587730 ANKRD50Q9ULJ7 1429 aa25.34■■□□□ 1.65
DDX39A-206ENST00000587730 FAM9BQ8IZU0 186 aa25.34■■□□□ 1.65
DDX39A-206ENST00000587730 KDM5DQ9BY66 1539 aa25.34■■□□□ 1.65
DDX39A-206ENST00000587730 CCDC184Q52MB2 194 aa25.33■■□□□ 1.64
DDX39A-206ENST00000587730 PLB1Q6P1J6 1458 aa25.32■■□□□ 1.64
DDX39A-206ENST00000587730 RALGAPBQ86X10 1494 aa25.32■■□□□ 1.64
DDX39A-206ENST00000587730 SHROOM2Q13796 1616 aa25.31■■□□□ 1.64
DDX39A-206ENST00000587730 DHX29Q7Z478 1369 aaKnown RBP25.3■■□□□ 1.64
DDX39A-206ENST00000587730 KTN1Q86UP2 1357 aaKnown RBP25.3■■□□□ 1.64
DDX39A-206ENST00000587730 SMG6Q86US8 1419 aaKnown RBP25.3■■□□□ 1.64
DDX39A-206ENST00000587730 KDM5CP41229 1560 aa25.29■■□□□ 1.64
DDX39A-206ENST00000587730 CYB5RLQ6IPT4 315 aa25.29■■□□□ 1.64
DDX39A-206ENST00000587730 PKD2Q13563 968 aa25.28■■□□□ 1.64
DDX39A-206ENST00000587730 ERCC6L2Q5T890 1561 aa25.28■■□□□ 1.64
DDX39A-206ENST00000587730 PLEKHD1A6NEE1 506 aa25.26■■□□□ 1.63
DDX39A-206ENST00000587730 ABCA8O94911 1581 aa25.25■■□□□ 1.63
DDX39A-206ENST00000587730 ABCC10Q5T3U5 1492 aa25.25■■□□□ 1.63
DDX39A-206ENST00000587730 C9orf84Q5VXU9 1444 aa25.25■■□□□ 1.63
DDX39A-206ENST00000587730 ARHGEF5Q12774 1597 aa25.23■■□□□ 1.63
DDX39A-206ENST00000587730 IRX6P78412 446 aaPredicted RBP25.22■■□□□ 1.63
DDX39A-206ENST00000587730 PTPRGP23470 1445 aa25.21■■□□□ 1.63
DDX39A-206ENST00000587730 ZNF777Q9ULD5 760 aaPredicted RBP25.2■■□□□ 1.62
DDX39A-206ENST00000587730 CDC42BPAQ5VT25 1732 aa25.19■■□□□ 1.62
DDX39A-206ENST00000587730 NUP155O75694 1391 aa25.19■■□□□ 1.62
DDX39A-206ENST00000587730 TSPY4P0CV99 314 aa25.19■■□□□ 1.62
DDX39A-206ENST00000587730 TSPY10P0CW01 314 aa25.19■■□□□ 1.62
DDX39A-206ENST00000587730 BCORL1Q5H9F3 1711 aa25.18■■□□□ 1.62
DDX39A-206ENST00000587730 NUDCQ9Y266 331 aa25.18■■□□□ 1.62
DDX39A-206ENST00000587730 KIF15Q9NS87 1388 aa25.17■■□□□ 1.62
DDX39A-206ENST00000587730 RSPH4AQ5TD94 716 aa25.17■■□□□ 1.62
DDX39A-206ENST00000587730 RNF123Q5XPI4 1314 aa25.17■■□□□ 1.62
DDX39A-206ENST00000587730 ATP10BO94823 1461 aa25.15■■□□□ 1.62
DDX39A-206ENST00000587730 MYT1LQ9UL68 1186 aa25.14■■□□□ 1.61
DDX39A-206ENST00000587730 ERICH6Q7L0X2 663 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms