RNA–Protein interactions for RNA: ENST00000587463.5

RANBP3-210, Transcript of RAN binding protein 3, human

TSL 5

Gene RANBP3, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RANBP3-210	ENST00000587463	CDC42BPB	Q9Y5S2	1711 aa		29.56	■■■□□ 2.32
RANBP3-210	ENST00000587463	ARHGAP5	Q13017	1502 aa		29.55	■■■□□ 2.32
RANBP3-210	ENST00000587463	POGZ	Q7Z3K3	1410 aa		29.55	■■■□□ 2.32
RANBP3-210	ENST00000587463	PREX2	Q70Z35	1606 aa		29.55	■■■□□ 2.32
RANBP3-210	ENST00000587463	ARHGEF40	Q8TER5	1519 aa		29.55	■■■□□ 2.32
RANBP3-210	ENST00000587463	MAGI2	Q86UL8	1455 aa		29.52	■■■□□ 2.32
RANBP3-210	ENST00000587463	CDC42BPA	Q5VT25	1732 aa		29.5	■■■□□ 2.31
RANBP3-210	ENST00000587463	ZFYVE16	Q7Z3T8	1539 aa		29.46	■■■□□ 2.31
RANBP3-210	ENST00000587463	ZNF518A	Q6AHZ1	1483 aa		29.44	■■■□□ 2.3
RANBP3-210	ENST00000587463	MTUS2	Q5JR59	1369 aa		29.44	■■■□□ 2.3
RANBP3-210	ENST00000587463	GPATCH8	Q9UKJ3	1502 aa	Known RBP	29.43	■■■□□ 2.3
RANBP3-210	ENST00000587463	VPS8	Q8N3P4	1428 aa		29.42	■■■□□ 2.3
RANBP3-210	ENST00000587463	YEATS2	Q9ULM3	1422 aa		29.42	■■■□□ 2.3
RANBP3-210	ENST00000587463	KDM5C	P41229	1560 aa		29.42	■■■□□ 2.3
RANBP3-210	ENST00000587463	ABCC1	P33527	1531 aa		29.41	■■■□□ 2.3
RANBP3-210	ENST00000587463	EHBP1L1	Q8N3D4	1523 aa		29.41	■■■□□ 2.3
RANBP3-210	ENST00000587463	ADAMTSL3	P82987	1691 aa		29.4	■■■□□ 2.3
RANBP3-210	ENST00000587463	BCORL1	Q5H9F3	1711 aa		29.38	■■■□□ 2.29
RANBP3-210	ENST00000587463	ARHGEF12	Q9NZN5	1544 aa		29.37	■■■□□ 2.29
RANBP3-210	ENST00000587463	ITSN2	Q9NZM3	1697 aa		29.37	■■■□□ 2.29
RANBP3-210	ENST00000587463	AFAP1	Q8N556	730 aa		29.35	■■■□□ 2.29
RANBP3-210	ENST00000587463	CCNB3	Q8WWL7	1395 aa		29.33	■■■□□ 2.29
RANBP3-210	ENST00000587463	TIAM1	Q13009	1591 aa		29.33	■■■□□ 2.29
RANBP3-210	ENST00000587463	SAMD9L	Q8IVG5	1584 aa		29.33	■■■□□ 2.29
RANBP3-210	ENST00000587463	SIGLEC1	Q9BZZ2	1709 aa		29.33	■■■□□ 2.29
RANBP3-210	ENST00000587463	ATP10A	O60312	1499 aa		29.32	■■■□□ 2.28
RANBP3-210	ENST00000587463	ARID4B	Q4LE39	1312 aa	Predicted RBP	29.32	■■■□□ 2.28
RANBP3-210	ENST00000587463	HECW2	Q9P2P5	1572 aa		29.31	■■■□□ 2.28
RANBP3-210	ENST00000587463	MLH3	Q9UHC1	1453 aa		29.31	■■■□□ 2.28
RANBP3-210	ENST00000587463	TRAPPC8	Q9Y2L5	1435 aa		29.31	■■■□□ 2.28
RANBP3-210	ENST00000587463	C9orf84	Q5VXU9	1444 aa		29.28	■■■□□ 2.28
RANBP3-210	ENST00000587463	KIAA1107	Q9UPP5	1409 aa		29.28	■■■□□ 2.28
RANBP3-210	ENST00000587463	MAP3K1	Q13233	1512 aa		29.27	■■■□□ 2.28
RANBP3-210	ENST00000587463	CFDP1	Q9UEE9	299 aa	Predicted RBP	29.27	■■■□□ 2.28
RANBP3-210	ENST00000587463	PLEKHH2	Q8IVE3	1493 aa		29.26	■■■□□ 2.27
RANBP3-210	ENST00000587463	MADD	Q8WXG6	1647 aa		29.25	■■■□□ 2.27
RANBP3-210	ENST00000587463	SUPT6H	Q7KZ85	1726 aa	Known RBP	29.25	■■■□□ 2.27
RANBP3-210	ENST00000587463	PTPRM	P28827	1452 aa		29.24	■■■□□ 2.27
RANBP3-210	ENST00000587463	RERE	Q9P2R6	1566 aa		29.24	■■■□□ 2.27
RANBP3-210	ENST00000587463	ZNF777	Q9ULD5	760 aa	Predicted RBP	29.24	■■■□□ 2.27
RANBP3-210	ENST00000587463	DIP2C	Q9Y2E4	1556 aa		29.24	■■■□□ 2.27
RANBP3-210	ENST00000587463	SYCP2	Q9BX26	1530 aa		29.24	■■■□□ 2.27
RANBP3-210	ENST00000587463	NCOA2	Q15596	1464 aa		29.22	■■■□□ 2.27
RANBP3-210	ENST00000587463	ABCA6	Q8N139	1617 aa		29.21	■■■□□ 2.27
RANBP3-210	ENST00000587463	LRRC9	Q6ZRR7	1453 aa		29.21	■■■□□ 2.27
RANBP3-210	ENST00000587463	KIDINS220	Q9ULH0	1771 aa		29.2	■■■□□ 2.26
RANBP3-210	ENST00000587463	HNRNPM	P52272	730 aa	Known RBP eCLIP	29.17	■■■□□ 2.26	7e-7	■■■□□ 15.5
RANBP3-210	ENST00000587463	RIMS1	Q86UR5	1692 aa	Known RBP	29.15	■■■□□ 2.26
RANBP3-210	ENST00000587463	MYT1L	Q9UL68	1186 aa		29.14	■■■□□ 2.26
RANBP3-210	ENST00000587463	AGL	P35573	1532 aa		29.12	■■■□□ 2.25
RANBP3-210	ENST00000587463	MBD5	Q9P267	1494 aa		29.11	■■■□□ 2.25
RANBP3-210	ENST00000587463	SPAG9	O60271	1321 aa	Known RBP	29.11	■■■□□ 2.25
RANBP3-210	ENST00000587463	ZNF644	Q9H582	1327 aa	Predicted RBP	29.11	■■■□□ 2.25
RANBP3-210	ENST00000587463	INO80	Q9ULG1	1556 aa	Predicted RBP	29.1	■■■□□ 2.25
RANBP3-210	ENST00000587463	FER1L4	A9Z1Z3	1794 aa		29.1	■■■□□ 2.25
RANBP3-210	ENST00000587463	KANK4	Q5T7N3	995 aa	Predicted RBP	29.09	■■■□□ 2.25
RANBP3-210	ENST00000587463	ATP7A	Q04656	1500 aa		29.08	■■■□□ 2.25
RANBP3-210	ENST00000587463	MLEC	Q14165	292 aa		29.07	■■■□□ 2.24
RANBP3-210	ENST00000587463	CAMSAP2	Q08AD1	1489 aa		29.04	■■■□□ 2.24
RANBP3-210	ENST00000587463	RTEL1-TNFRSF6B	F6WH68	1400 aa		29	■■■□□ 2.23
RANBP3-210	ENST00000587463	RSPH4A	Q5TD94	716 aa		28.99	■■■□□ 2.23
RANBP3-210	ENST00000587463	PLXNC1	O60486	1568 aa		28.99	■■■□□ 2.23
RANBP3-210	ENST00000587463	CCDC141	Q6ZP82	1450 aa		28.97	■■■□□ 2.23
RANBP3-210	ENST00000587463	ARHGEF5	Q12774	1597 aa		28.97	■■■□□ 2.23
RANBP3-210	ENST00000587463	APLP2	Q06481	763 aa		28.97	■■■□□ 2.23
RANBP3-210	ENST00000587463	A2M	P01023	1474 aa		28.96	■■■□□ 2.23
RANBP3-210	ENST00000587463	ADGB	Q8N7X0	1667 aa		28.96	■■■□□ 2.23
RANBP3-210	ENST00000587463	MYOM3	Q5VTT5	1437 aa		28.95	■■■□□ 2.23
RANBP3-210	ENST00000587463	MIA2	Q96PC5	1412 aa		28.95	■■■□□ 2.23
RANBP3-210	ENST00000587463	LMTK3	Q96Q04	1460 aa		28.91	■■■□□ 2.22
RANBP3-210	ENST00000587463	CNTLN	Q9NXG0	1405 aa		28.86	■■■□□ 2.21
RANBP3-210	ENST00000587463	DHX29	Q7Z478	1369 aa	Known RBP	28.84	■■■□□ 2.21
RANBP3-210	ENST00000587463	PLPPR3	Q6T4P5	718 aa		28.83	■■■□□ 2.21
RANBP3-210	ENST00000587463	MAST1	Q9Y2H9	1570 aa		28.83	■■■□□ 2.21
RANBP3-210	ENST00000587463	C3	P01024	1663 aa		28.83	■■■□□ 2.21
RANBP3-210	ENST00000587463	CEBPA	P49715	358 aa	Predicted RBP	28.82	■■■□□ 2.2
RANBP3-210	ENST00000587463	MROH2A	A6NES4	1674 aa		28.81	■■■□□ 2.2
RANBP3-210	ENST00000587463	TSPY4	P0CV99	314 aa		28.81	■■■□□ 2.2
RANBP3-210	ENST00000587463	TSPY10	P0CW01	314 aa		28.81	■■■□□ 2.2
RANBP3-210	ENST00000587463	ESF1	Q9H501	851 aa	Known RBP	28.81	■■■□□ 2.2
RANBP3-210	ENST00000587463	PREX1	Q8TCU6	1659 aa		28.79	■■■□□ 2.2
RANBP3-210	ENST00000587463	PPP6R1	Q9UPN7	881 aa		28.78	■■■□□ 2.2
RANBP3-210	ENST00000587463	PTPN23	Q9H3S7	1636 aa		28.77	■■■□□ 2.2
RANBP3-210	ENST00000587463	SETD1B	Q9UPS6	1966 aa	Known RBP	28.77	■■■□□ 2.2
RANBP3-210	ENST00000587463	TCOF1	Q13428	1488 aa	Known RBP	28.75	■■■□□ 2.19
RANBP3-210	ENST00000587463	FGD6	Q6ZV73	1430 aa		28.75	■■■□□ 2.19
RANBP3-210	ENST00000587463	GGT6	Q6P531	493 aa		28.72	■■■□□ 2.19
RANBP3-210	ENST00000587463	CLTC	Q00610	1675 aa	Known RBP	28.72	■■■□□ 2.19
RANBP3-210	ENST00000587463	ZMYM3	Q14202	1370 aa		28.71	■■■□□ 2.19
RANBP3-210	ENST00000587463	SHANK2	Q9UPX8	1470 aa		28.7	■■■□□ 2.18
RANBP3-210	ENST00000587463	CROCC2	H7BZ55	1655 aa		28.69	■■■□□ 2.18
RANBP3-210	ENST00000587463	FAM135A	Q9P2D6	1515 aa		28.69	■■■□□ 2.18
RANBP3-210	ENST00000587463	NPAT	Q14207	1427 aa		28.69	■■■□□ 2.18
RANBP3-210	ENST00000587463	ABCC5	O15440	1437 aa		28.68	■■■□□ 2.18
RANBP3-210	ENST00000587463	HSPA2	P54652	639 aa		28.67	■■■□□ 2.18
RANBP3-210	ENST00000587463	UHRF1BP1	Q6BDS2	1440 aa		28.67	■■■□□ 2.18
RANBP3-210	ENST00000587463	DNMT1	P26358	1616 aa	Known RBP	28.66	■■■□□ 2.18
RANBP3-210	ENST00000587463	KIF3B	O15066	747 aa		28.66	■■■□□ 2.18
RANBP3-210	ENST00000587463	DAPK1	P53355	1430 aa		28.63	■■■□□ 2.17
RANBP3-210	ENST00000587463	EIF2AK4	Q9P2K8	1649 aa	Known RBP	28.63	■■■□□ 2.17

Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms