RNA–Protein interactions for RNA: ENST00000587429.1

PKN1-210, Transcript of protein kinase N1, humanhuman

TSL 4

Gene PKN1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-210ENST00000587429 ZMYM4Q5VZL5 1548 aa34.87■■■■□ 3.17
PKN1-210ENST00000587429 POGZQ7Z3K3 1410 aa34.87■■■■□ 3.17
PKN1-210ENST00000587429 YEATS2Q9ULM3 1422 aa34.86■■■■□ 3.17
PKN1-210ENST00000587429 CDC42BPBQ9Y5S2 1711 aa34.85■■■■□ 3.17
PKN1-210ENST00000587429 ADAMTSL3P82987 1691 aa34.84■■■■□ 3.17
PKN1-210ENST00000587429 CEP162Q5TB80 1403 aa34.83■■■■□ 3.17
PKN1-210ENST00000587429 LOC105371045A0A1W2PR82 267 aa34.82■■■■□ 3.16
PKN1-210ENST00000587429 ZFYVE16Q7Z3T8 1539 aa34.81■■■■□ 3.16
PKN1-210ENST00000587429 BCORL1Q5H9F3 1711 aa34.81■■■■□ 3.16
PKN1-210ENST00000587429 MAGI2Q86UL8 1455 aa34.78■■■■□ 3.16
PKN1-210ENST00000587429 SIGLEC1Q9BZZ2 1709 aa34.76■■■■□ 3.16
PKN1-210ENST00000587429 AFAP1Q8N556 730 aa34.76■■■■□ 3.16
PKN1-210ENST00000587429 PREX2Q70Z35 1606 aa34.76■■■■□ 3.15
PKN1-210ENST00000587429 CDC42BPAQ5VT25 1732 aa34.74■■■■□ 3.15
PKN1-210ENST00000587429 PTPRMP28827 1452 aa34.71■■■■□ 3.15
PKN1-210ENST00000587429 MADDQ8WXG6 1647 aa34.71■■■■□ 3.15
PKN1-210ENST00000587429 ZNF518AQ6AHZ1 1483 aa34.69■■■■□ 3.14
PKN1-210ENST00000587429 HECW2Q9P2P5 1572 aa34.69■■■■□ 3.14
PKN1-210ENST00000587429 ARHGEF12Q9NZN5 1544 aa34.67■■■■□ 3.14
PKN1-210ENST00000587429 ATP10AO60312 1499 aa34.65■■■■□ 3.14
PKN1-210ENST00000587429 KDM5CP41229 1560 aa34.65■■■■□ 3.14
PKN1-210ENST00000587429 MLECQ14165 292 aa34.64■■■■□ 3.14
PKN1-210ENST00000587429 GPATCH8Q9UKJ3 1502 aaKnown RBP34.64■■■■□ 3.14
PKN1-210ENST00000587429 TRAPPC8Q9Y2L5 1435 aa34.64■■■■□ 3.14
PKN1-210ENST00000587429 MTUS2Q5JR59 1369 aa34.63■■■■□ 3.13
PKN1-210ENST00000587429 ZNF777Q9ULD5 760 aaPredicted RBP34.63■■■■□ 3.13
PKN1-210ENST00000587429 ABCC1P33527 1531 aa34.63■■■■□ 3.13
PKN1-210ENST00000587429 MYT1LQ9UL68 1186 aa34.62■■■■□ 3.13
PKN1-210ENST00000587429 RIMS1Q86UR5 1692 aaKnown RBP34.6■■■■□ 3.13
PKN1-210ENST00000587429 ITSN2Q9NZM3 1697 aa34.6■■■■□ 3.13
PKN1-210ENST00000587429 C9orf84Q5VXU9 1444 aa34.58■■■■□ 3.13
PKN1-210ENST00000587429 SAMD9LQ8IVG5 1584 aa34.55■■■■□ 3.12
PKN1-210ENST00000587429 CCNB3Q8WWL7 1395 aa34.55■■■■□ 3.12
PKN1-210ENST00000587429 MLH3Q9UHC1 1453 aa34.53■■■■□ 3.12
PKN1-210ENST00000587429 CFDP1Q9UEE9 299 aaPredicted RBP34.53■■■■□ 3.12
PKN1-210ENST00000587429 DIP2CQ9Y2E4 1556 aa34.52■■■■□ 3.12
PKN1-210ENST00000587429 HNRNPMP52272 730 aaKnown RBP eCLIP34.51■■■■□ 3.12
PKN1-210ENST00000587429 PLPPR3Q6T4P5 718 aa34.51■■■■□ 3.12
PKN1-210ENST00000587429 ABCA6Q8N139 1617 aa34.49■■■■□ 3.11
PKN1-210ENST00000587429 EHBP1L1Q8N3D4 1523 aa34.49■■■■□ 3.11
PKN1-210ENST00000587429 SYCP2Q9BX26 1530 aa34.48■■■■□ 3.11
PKN1-210ENST00000587429 FER1L4A9Z1Z3 1794 aa34.46■■■■□ 3.11
PKN1-210ENST00000587429 KIDINS220Q9ULH0 1771 aa34.46■■■■□ 3.11
PKN1-210ENST00000587429 TIAM1Q13009 1591 aa34.44■■■■□ 3.1
PKN1-210ENST00000587429 VPS8Q8N3P4 1428 aa34.43■■■■□ 3.1
PKN1-210ENST00000587429 ZNF644Q9H582 1327 aaPredicted RBP34.41■■■■□ 3.1
PKN1-210ENST00000587429 REREQ9P2R6 1566 aa34.4■■■■□ 3.1
PKN1-210ENST00000587429 KIAA1107Q9UPP5 1409 aa34.39■■■■□ 3.1
PKN1-210ENST00000587429 SPAG9O60271 1321 aaKnown RBP34.37■■■■□ 3.09
PKN1-210ENST00000587429 PLEKHH2Q8IVE3 1493 aa34.37■■■■□ 3.09
PKN1-210ENST00000587429 NCOA2Q15596 1464 aa34.33■■■■□ 3.09
PKN1-210ENST00000587429 LMTK3Q96Q04 1460 aa34.33■■■■□ 3.09
PKN1-210ENST00000587429 CEBPAP49715 358 aaPredicted RBP34.32■■■■□ 3.08
PKN1-210ENST00000587429 SUPT6HQ7KZ85 1726 aaKnown RBP34.32■■■■□ 3.08
PKN1-210ENST00000587429 AGLP35573 1532 aa34.31■■■■□ 3.08
PKN1-210ENST00000587429 ATP7AQ04656 1500 aa34.27■■■■□ 3.08
PKN1-210ENST00000587429 LRRC9Q6ZRR7 1453 aa34.26■■■■□ 3.07
PKN1-210ENST00000587429 MBD5Q9P267 1494 aa34.26■■■■□ 3.07
PKN1-210ENST00000587429 KANK4Q5T7N3 995 aaPredicted RBP34.25■■■■□ 3.07
PKN1-210ENST00000587429 INO80Q9ULG1 1556 aaPredicted RBP34.24■■■■□ 3.07
PKN1-210ENST00000587429 HSPA2P54652 639 aa34.23■■■■□ 3.07
PKN1-210ENST00000587429 MAP3K1Q13233 1512 aa34.16■■■■□ 3.06
PKN1-210ENST00000587429 CAMSAP2Q08AD1 1489 aa34.16■■■■□ 3.06
PKN1-210ENST00000587429 ESF1Q9H501 851 aaKnown RBP34.16■■■■□ 3.06
PKN1-210ENST00000587429 A2MP01023 1474 aa34.15■■■■□ 3.06
PKN1-210ENST00000587429 C3P01024 1663 aa34.12■■■■□ 3.05
PKN1-210ENST00000587429 PLXNC1O60486 1568 aa34.12■■■■□ 3.05
PKN1-210ENST00000587429 SETD1BQ9UPS6 1966 aaKnown RBP34.12■■■■□ 3.05
PKN1-210ENST00000587429 PREX1Q8TCU6 1659 aa34.09■■■■□ 3.05
PKN1-210ENST00000587429 RTEL1-TNFRSF6BF6WH68 1400 aa34.08■■■■□ 3.05
PKN1-210ENST00000587429 ADGBQ8N7X0 1667 aa34.08■■■■□ 3.05
PKN1-210ENST00000587429 CCDC141Q6ZP82 1450 aa34.07■■■■□ 3.05
PKN1-210ENST00000587429 ILDR1Q86SU0 546 aaPredicted RBP34.05■■■■□ 3.04
PKN1-210ENST00000587429 CNTLNQ9NXG0 1405 aa34.04■■■■□ 3.04
PKN1-210ENST00000587429 RSPH4AQ5TD94 716 aa34.04■■■■□ 3.04
PKN1-210ENST00000587429 GGT6Q6P531 493 aa34.04■■■■□ 3.04
PKN1-210ENST00000587429 APLP2Q06481 763 aa34.01■■■■□ 3.03
PKN1-210ENST00000587429 ARHGEF5Q12774 1597 aa34■■■■□ 3.03
PKN1-210ENST00000587429 DHX29Q7Z478 1369 aaKnown RBP33.99■■■■□ 3.03
PKN1-210ENST00000587429 ZMYM3Q14202 1370 aa33.98■■■■□ 3.03
PKN1-210ENST00000587429 MYOM3Q5VTT5 1437 aa33.98■■■■□ 3.03
PKN1-210ENST00000587429 UHRF1BP1Q6BDS2 1440 aa33.97■■■■□ 3.03
PKN1-210ENST00000587429 CLTCQ00610 1675 aaKnown RBP33.97■■■■□ 3.03
PKN1-210ENST00000587429 MROH2AA6NES4 1674 aa33.96■■■■□ 3.03
PKN1-210ENST00000587429 TSPY4P0CV99 314 aa33.95■■■■□ 3.03
PKN1-210ENST00000587429 TSPY10P0CW01 314 aa33.95■■■■□ 3.03
PKN1-210ENST00000587429 MIA2Q96PC5 1412 aa33.93■■■■□ 3.02
PKN1-210ENST00000587429 KIF3BO15066 747 aa33.91■■■■□ 3.02
PKN1-210ENST00000587429 PPP6R1Q9UPN7 881 aa33.88■■■■□ 3.01
PKN1-210ENST00000587429 STRCQ7RTU9 1775 aa33.85■■■■□ 3.01
PKN1-210ENST00000587429 NPATQ14207 1427 aa33.85■■■■□ 3.01
PKN1-210ENST00000587429 MAST1Q9Y2H9 1570 aa33.81■■■■□ 3
PKN1-210ENST00000587429 PTPRKQ15262 1439 aa33.81■■■■□ 3
PKN1-210ENST00000587429 PTPN23Q9H3S7 1636 aa33.78■■■■□ 3
PKN1-210ENST00000587429 FGD6Q6ZV73 1430 aa33.73■■■□□ 2.99
PKN1-210ENST00000587429 WASHC2CQ9Y4E1 1318 aa33.73■■■□□ 2.99
PKN1-210ENST00000587429 ABCC5O15440 1437 aa33.72■■■□□ 2.99
PKN1-210ENST00000587429 DMRT2Q9Y5R5 561 aa33.71■■■□□ 2.99
PKN1-210ENST00000587429 FBXO31Q5XUX0 539 aaPredicted RBP33.7■■■□□ 2.99
PKN1-210ENST00000587429 KDM5DQ9BY66 1539 aa33.69■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms