RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 POGZQ7Z3K3 1410 aa28.35■■■□□ 2.13
TPM4-206ENST00000587201 ZMYM4Q5VZL5 1548 aa28.35■■■□□ 2.13
TPM4-206ENST00000587201 ARID4BQ4LE39 1312 aaPredicted RBP28.35■■■□□ 2.13
TPM4-206ENST00000587201 ARHGEF40Q8TER5 1519 aa28.34■■■□□ 2.13
TPM4-206ENST00000587201 MAGI2Q86UL8 1455 aa28.31■■■□□ 2.12
TPM4-206ENST00000587201 ZFYVE16Q7Z3T8 1539 aa28.31■■■□□ 2.12
TPM4-206ENST00000587201 CDC42BPBQ9Y5S2 1711 aa28.3■■■□□ 2.12
TPM4-206ENST00000587201 PREX2Q70Z35 1606 aa28.3■■■□□ 2.12
TPM4-206ENST00000587201 YEATS2Q9ULM3 1422 aa28.29■■■□□ 2.12
TPM4-206ENST00000587201 MTUS2Q5JR59 1369 aa28.27■■■□□ 2.12
TPM4-206ENST00000587201 ZNF518AQ6AHZ1 1483 aa28.25■■■□□ 2.11
TPM4-206ENST00000587201 AFAP1Q8N556 730 aa28.24■■■□□ 2.11
TPM4-206ENST00000587201 CDC42BPAQ5VT25 1732 aa28.23■■■□□ 2.11
TPM4-206ENST00000587201 ADAMTSL3P82987 1691 aa28.23■■■□□ 2.11
TPM4-206ENST00000587201 BCORL1Q5H9F3 1711 aa28.22■■■□□ 2.11
TPM4-206ENST00000587201 MYT1LQ9UL68 1186 aa28.21■■■□□ 2.11
TPM4-206ENST00000587201 ZNF777Q9ULD5 760 aaPredicted RBP28.2■■■□□ 2.1
TPM4-206ENST00000587201 GPATCH8Q9UKJ3 1502 aaKnown RBP28.19■■■□□ 2.1
TPM4-206ENST00000587201 ABCC1P33527 1531 aa28.18■■■□□ 2.1
TPM4-206ENST00000587201 CCNB3Q8WWL7 1395 aa28.18■■■□□ 2.1
TPM4-206ENST00000587201 KDM5CP41229 1560 aa28.17■■■□□ 2.1
TPM4-206ENST00000587201 ATP10AO60312 1499 aa28.16■■■□□ 2.1
TPM4-206ENST00000587201 EHBP1L1Q8N3D4 1523 aa28.16■■■□□ 2.1
TPM4-206ENST00000587201 ARHGEF12Q9NZN5 1544 aa28.16■■■□□ 2.1
TPM4-206ENST00000587201 TRAPPC8Q9Y2L5 1435 aa28.15■■■□□ 2.1
TPM4-206ENST00000587201 PTPRMP28827 1452 aa28.15■■■□□ 2.1
TPM4-206ENST00000587201 CFDP1Q9UEE9 299 aaPredicted RBP28.14■■■□□ 2.1
TPM4-206ENST00000587201 C9orf84Q5VXU9 1444 aa28.14■■■□□ 2.1
TPM4-206ENST00000587201 MADDQ8WXG6 1647 aa28.14■■■□□ 2.09
TPM4-206ENST00000587201 ITSN2Q9NZM3 1697 aa28.13■■■□□ 2.09
TPM4-206ENST00000587201 VPS8Q8N3P4 1428 aa28.13■■■□□ 2.09
TPM4-206ENST00000587201 SIGLEC1Q9BZZ2 1709 aa28.12■■■□□ 2.09
TPM4-206ENST00000587201 HECW2Q9P2P5 1572 aa28.12■■■□□ 2.09
TPM4-206ENST00000587201 MLECQ14165 292 aa28.12■■■□□ 2.09
TPM4-206ENST00000587201 SAMD9LQ8IVG5 1584 aa28.11■■■□□ 2.09
TPM4-206ENST00000587201 MLH3Q9UHC1 1453 aa28.09■■■□□ 2.09
TPM4-206ENST00000587201 SYCP2Q9BX26 1530 aa28.07■■■□□ 2.08
TPM4-206ENST00000587201 HNRNPMP52272 730 aaKnown RBP eCLIP28.06■■■□□ 2.08
TPM4-206ENST00000587201 TIAM1Q13009 1591 aa28.06■■■□□ 2.08
TPM4-206ENST00000587201 RIMS1Q86UR5 1692 aaKnown RBP28.05■■■□□ 2.08
TPM4-206ENST00000587201 DIP2CQ9Y2E4 1556 aa28.05■■■□□ 2.08
TPM4-206ENST00000587201 PLEKHH2Q8IVE3 1493 aa28.04■■■□□ 2.08
TPM4-206ENST00000587201 KIAA1107Q9UPP5 1409 aa28.02■■■□□ 2.08
TPM4-206ENST00000587201 ABCA6Q8N139 1617 aa28.01■■■□□ 2.07
TPM4-206ENST00000587201 SUPT6HQ7KZ85 1726 aaKnown RBP28■■■□□ 2.07
TPM4-206ENST00000587201 SPAG9O60271 1321 aaKnown RBP27.99■■■□□ 2.07
TPM4-206ENST00000587201 PLPPR3Q6T4P5 718 aa27.99■■■□□ 2.07
TPM4-206ENST00000587201 NCOA2Q15596 1464 aa27.99■■■□□ 2.07
TPM4-206ENST00000587201 KIDINS220Q9ULH0 1771 aa27.98■■■□□ 2.07
TPM4-206ENST00000587201 REREQ9P2R6 1566 aa27.98■■■□□ 2.07
TPM4-206ENST00000587201 ZNF644Q9H582 1327 aaPredicted RBP27.97■■■□□ 2.07
TPM4-206ENST00000587201 FER1L4A9Z1Z3 1794 aa27.96■■■□□ 2.07
TPM4-206ENST00000587201 LRRC9Q6ZRR7 1453 aa27.95■■■□□ 2.07
TPM4-206ENST00000587201 MAP3K1Q13233 1512 aa27.92■■■□□ 2.06
TPM4-206ENST00000587201 AGLP35573 1532 aa27.9■■■□□ 2.06
TPM4-206ENST00000587201 ATP7AQ04656 1500 aa27.9■■■□□ 2.06
TPM4-206ENST00000587201 KANK4Q5T7N3 995 aaPredicted RBP27.89■■■□□ 2.06
TPM4-206ENST00000587201 MBD5Q9P267 1494 aa27.88■■■□□ 2.05
TPM4-206ENST00000587201 APLP2Q06481 763 aa27.87■■■□□ 2.05
TPM4-206ENST00000587201 INO80Q9ULG1 1556 aaPredicted RBP27.86■■■□□ 2.05
TPM4-206ENST00000587201 CAMSAP2Q08AD1 1489 aa27.84■■■□□ 2.05
TPM4-206ENST00000587201 ESF1Q9H501 851 aaKnown RBP27.84■■■□□ 2.05
TPM4-206ENST00000587201 CEBPAP49715 358 aaPredicted RBP27.82■■■□□ 2.04
TPM4-206ENST00000587201 LMTK3Q96Q04 1460 aa27.81■■■□□ 2.04
TPM4-206ENST00000587201 A2MP01023 1474 aa27.8■■■□□ 2.04
TPM4-206ENST00000587201 RSPH4AQ5TD94 716 aa27.79■■■□□ 2.04
TPM4-206ENST00000587201 CCDC141Q6ZP82 1450 aa27.78■■■□□ 2.04
TPM4-206ENST00000587201 RTEL1-TNFRSF6BF6WH68 1400 aa27.77■■■□□ 2.04
TPM4-206ENST00000587201 PLXNC1O60486 1568 aa27.74■■■□□ 2.03
TPM4-206ENST00000587201 ADGBQ8N7X0 1667 aa27.73■■■□□ 2.03
TPM4-206ENST00000587201 MYOM3Q5VTT5 1437 aa27.73■■■□□ 2.03
TPM4-206ENST00000587201 TSPY4P0CV99 314 aa27.71■■■□□ 2.03
TPM4-206ENST00000587201 TSPY10P0CW01 314 aa27.71■■■□□ 2.03
TPM4-206ENST00000587201 HSPA2P54652 639 aa27.71■■■□□ 2.03
TPM4-206ENST00000587201 CNTLNQ9NXG0 1405 aa27.71■■■□□ 2.03
TPM4-206ENST00000587201 ARHGEF5Q12774 1597 aa27.7■■■□□ 2.03
TPM4-206ENST00000587201 MIA2Q96PC5 1412 aa27.7■■■□□ 2.03
TPM4-206ENST00000587201 GGT6Q6P531 493 aa27.69■■■□□ 2.02
TPM4-206ENST00000587201 C3P01024 1663 aa27.68■■■□□ 2.02
TPM4-206ENST00000587201 DHX29Q7Z478 1369 aaKnown RBP27.67■■■□□ 2.02
TPM4-206ENST00000587201 PREX1Q8TCU6 1659 aa27.65■■■□□ 2.02
TPM4-206ENST00000587201 UHRF1BP1Q6BDS2 1440 aa27.62■■■□□ 2.01
TPM4-206ENST00000587201 ZMYM3Q14202 1370 aa27.61■■■□□ 2.01
TPM4-206ENST00000587201 MROH2AA6NES4 1674 aa27.6■■■□□ 2.01
TPM4-206ENST00000587201 PPP6R1Q9UPN7 881 aa27.6■■■□□ 2.01
TPM4-206ENST00000587201 SETD1BQ9UPS6 1966 aaKnown RBP27.59■■■□□ 2.01
TPM4-206ENST00000587201 KIF3BO15066 747 aa27.59■■■□□ 2.01
TPM4-206ENST00000587201 CLTCQ00610 1675 aaKnown RBP27.59■■■□□ 2.01
TPM4-206ENST00000587201 MAST1Q9Y2H9 1570 aa27.56■■■□□ 2
TPM4-206ENST00000587201 PTPN23Q9H3S7 1636 aa27.55■■■□□ 2
TPM4-206ENST00000587201 FGD6Q6ZV73 1430 aa27.53■■■□□ 2
TPM4-206ENST00000587201 NPATQ14207 1427 aa27.52■■■□□ 2
TPM4-206ENST00000587201 TCOF1Q13428 1488 aaKnown RBP27.47■■□□□ 1.99
TPM4-206ENST00000587201 ABCC5O15440 1437 aa27.47■■□□□ 1.99
TPM4-206ENST00000587201 WASHC2CQ9Y4E1 1318 aa27.45■■□□□ 1.99
TPM4-206ENST00000587201 PTPRKQ15262 1439 aa27.45■■□□□ 1.98
TPM4-206ENST00000587201 DAPK1P53355 1430 aa27.44■■□□□ 1.98
TPM4-206ENST00000587201 KDM5DQ9BY66 1539 aa27.44■■□□□ 1.98
TPM4-206ENST00000587201 SHANK2Q9UPX8 1470 aa27.44■■□□□ 1.98
TPM4-206ENST00000587201 ILDR1Q86SU0 546 aaPredicted RBP27.43■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms