RNA–Protein interactions for RNA: ENST00000587197.1

DNMT1-212, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 809 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-212ENST00000587197 SCAPERQ9BY12 1400 aa27.17■■□□□ 1.94
DNMT1-212ENST00000587197 MTUS2Q5JR59 1369 aa27.16■■□□□ 1.94
DNMT1-212ENST00000587197 TIAM1Q13009 1591 aa27.14■■□□□ 1.94
DNMT1-212ENST00000587197 ARHGAP5Q13017 1502 aa27.14■■□□□ 1.94
DNMT1-212ENST00000587197 ARID4BQ4LE39 1312 aaPredicted RBP27.13■■□□□ 1.93
DNMT1-212ENST00000587197 MAGI2Q86UL8 1455 aa27.13■■□□□ 1.93
DNMT1-212ENST00000587197 ZMYM4Q5VZL5 1548 aa27.11■■□□□ 1.93
DNMT1-212ENST00000587197 APLP2Q06481 763 aa27.11■■□□□ 1.93
DNMT1-212ENST00000587197 EHBP1L1Q8N3D4 1523 aa27.11■■□□□ 1.93
DNMT1-212ENST00000587197 POGZQ7Z3K3 1410 aa27.1■■□□□ 1.93
DNMT1-212ENST00000587197 ARHGEF40Q8TER5 1519 aa27.1■■□□□ 1.93
DNMT1-212ENST00000587197 ZFYVE16Q7Z3T8 1539 aa27.07■■□□□ 1.92
DNMT1-212ENST00000587197 LRRC9Q6ZRR7 1453 aa27.06■■□□□ 1.92
DNMT1-212ENST00000587197 PREX2Q70Z35 1606 aa27.04■■□□□ 1.92
DNMT1-212ENST00000587197 ZNF518AQ6AHZ1 1483 aa27.03■■□□□ 1.92
DNMT1-212ENST00000587197 CDC42BPBQ9Y5S2 1711 aa27.03■■□□□ 1.92
DNMT1-212ENST00000587197 KANK4Q5T7N3 995 aaPredicted RBP27.02■■□□□ 1.92
DNMT1-212ENST00000587197 YEATS2Q9ULM3 1422 aa27■■□□□ 1.91
DNMT1-212ENST00000587197 ADAMTSL3P82987 1691 aa26.99■■□□□ 1.91
DNMT1-212ENST00000587197 MYT1LQ9UL68 1186 aa26.99■■□□□ 1.91
DNMT1-212ENST00000587197 BCORL1Q5H9F3 1711 aa26.99■■□□□ 1.91
DNMT1-212ENST00000587197 AFAP1Q8N556 730 aa26.97■■□□□ 1.91
DNMT1-212ENST00000587197 CDC42BPAQ5VT25 1732 aa26.96■■□□□ 1.91
DNMT1-212ENST00000587197 CCNB3Q8WWL7 1395 aa26.96■■□□□ 1.91
DNMT1-212ENST00000587197 GPATCH8Q9UKJ3 1502 aaKnown RBP26.95■■□□□ 1.91
DNMT1-212ENST00000587197 ATP10AO60312 1499 aa26.95■■□□□ 1.91
DNMT1-212ENST00000587197 NCOA2Q15596 1464 aa26.95■■□□□ 1.91
DNMT1-212ENST00000587197 ZNF777Q9ULD5 760 aaPredicted RBP26.94■■□□□ 1.9
DNMT1-212ENST00000587197 KDM5CP41229 1560 aa26.93■■□□□ 1.9
DNMT1-212ENST00000587197 ABCC1P33527 1531 aa26.93■■□□□ 1.9
DNMT1-212ENST00000587197 SUPT6HQ7KZ85 1726 aaKnown RBP26.93■■□□□ 1.9
DNMT1-212ENST00000587197 PTPRMP28827 1452 aa26.92■■□□□ 1.9
DNMT1-212ENST00000587197 C9orf84Q5VXU9 1444 aa26.91■■□□□ 1.9
DNMT1-212ENST00000587197 CFDP1Q9UEE9 299 aaPredicted RBP26.91■■□□□ 1.9
DNMT1-212ENST00000587197 HECW2Q9P2P5 1572 aa26.88■■□□□ 1.89
DNMT1-212ENST00000587197 MADDQ8WXG6 1647 aa26.88■■□□□ 1.89
DNMT1-212ENST00000587197 MLH3Q9UHC1 1453 aa26.87■■□□□ 1.89
DNMT1-212ENST00000587197 ITSN2Q9NZM3 1697 aa26.87■■□□□ 1.89
DNMT1-212ENST00000587197 TRAPPC8Q9Y2L5 1435 aa26.87■■□□□ 1.89
DNMT1-212ENST00000587197 ARHGEF12Q9NZN5 1544 aa26.86■■□□□ 1.89
DNMT1-212ENST00000587197 PLEKHH2Q8IVE3 1493 aa26.86■■□□□ 1.89
DNMT1-212ENST00000587197 MLECQ14165 292 aa26.85■■□□□ 1.89
DNMT1-212ENST00000587197 SAMD9LQ8IVG5 1584 aa26.83■■□□□ 1.89
DNMT1-212ENST00000587197 KIAA1107Q9UPP5 1409 aa26.82■■□□□ 1.88
DNMT1-212ENST00000587197 RIMS1Q86UR5 1692 aaKnown RBP26.81■■□□□ 1.88
DNMT1-212ENST00000587197 SIGLEC1Q9BZZ2 1709 aa26.8■■□□□ 1.88
DNMT1-212ENST00000587197 HNRNPMP52272 730 aaKnown RBP eCLIP26.8■■□□□ 1.88
DNMT1-212ENST00000587197 SYCP2Q9BX26 1530 aa26.79■■□□□ 1.88
DNMT1-212ENST00000587197 DIP2CQ9Y2E4 1556 aa26.79■■□□□ 1.88
DNMT1-212ENST00000587197 REREQ9P2R6 1566 aa26.77■■□□□ 1.88
DNMT1-212ENST00000587197 MYOM3Q5VTT5 1437 aa26.77■■□□□ 1.88
DNMT1-212ENST00000587197 SPAG9O60271 1321 aaKnown RBP26.77■■□□□ 1.88
DNMT1-212ENST00000587197 MIA2Q96PC5 1412 aa26.76■■□□□ 1.87
DNMT1-212ENST00000587197 ABCA6Q8N139 1617 aa26.75■■□□□ 1.87
DNMT1-212ENST00000587197 FER1L4A9Z1Z3 1794 aa26.74■■□□□ 1.87
DNMT1-212ENST00000587197 KIDINS220Q9ULH0 1771 aa26.73■■□□□ 1.87
DNMT1-212ENST00000587197 PLPPR3Q6T4P5 718 aa26.71■■□□□ 1.87
DNMT1-212ENST00000587197 AGLP35573 1532 aa26.7■■□□□ 1.87
DNMT1-212ENST00000587197 ZNF644Q9H582 1327 aaPredicted RBP26.7■■□□□ 1.87
DNMT1-212ENST00000587197 ESF1Q9H501 851 aaKnown RBP26.69■■□□□ 1.86
DNMT1-212ENST00000587197 ATP7AQ04656 1500 aa26.66■■□□□ 1.86
DNMT1-212ENST00000587197 RSPH4AQ5TD94 716 aa26.66■■□□□ 1.86
DNMT1-212ENST00000587197 FGD6Q6ZV73 1430 aa26.65■■□□□ 1.86
DNMT1-212ENST00000587197 CAMSAP2Q08AD1 1489 aa26.65■■□□□ 1.86
DNMT1-212ENST00000587197 MBD5Q9P267 1494 aa26.65■■□□□ 1.86
DNMT1-212ENST00000587197 PPARGC1BQ86YN6 1023 aaKnown RBP26.61■■□□□ 1.85
DNMT1-212ENST00000587197 INO80Q9ULG1 1556 aaPredicted RBP26.61■■□□□ 1.85
DNMT1-212ENST00000587197 RTEL1-TNFRSF6BF6WH68 1400 aa26.58■■□□□ 1.85
DNMT1-212ENST00000587197 A2MP01023 1474 aa26.58■■□□□ 1.85
DNMT1-212ENST00000587197 TCOF1Q13428 1488 aaKnown RBP26.58■■□□□ 1.85
DNMT1-212ENST00000587197 LMTK3Q96Q04 1460 aa26.58■■□□□ 1.85
DNMT1-212ENST00000587197 CCDC141Q6ZP82 1450 aa26.56■■□□□ 1.84
DNMT1-212ENST00000587197 ARHGEF5Q12774 1597 aa26.56■■□□□ 1.84
DNMT1-212ENST00000587197 CNTLNQ9NXG0 1405 aa26.56■■□□□ 1.84
DNMT1-212ENST00000587197 PTPN23Q9H3S7 1636 aa26.55■■□□□ 1.84
DNMT1-212ENST00000587197 CEBPAP49715 358 aaPredicted RBP26.55■■□□□ 1.84
DNMT1-212ENST00000587197 ADGBQ8N7X0 1667 aa26.54■■□□□ 1.84
DNMT1-212ENST00000587197 TSPY4P0CV99 314 aa26.53■■□□□ 1.84
DNMT1-212ENST00000587197 TSPY10P0CW01 314 aa26.53■■□□□ 1.84
DNMT1-212ENST00000587197 PLXNC1O60486 1568 aa26.5■■□□□ 1.83
DNMT1-212ENST00000587197 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.47■■□□□ 1.83
DNMT1-212ENST00000587197 HSPA2P54652 639 aa26.47■■□□□ 1.83
DNMT1-212ENST00000587197 GGT6Q6P531 493 aa26.47■■□□□ 1.83
DNMT1-212ENST00000587197 PPP6R1Q9UPN7 881 aa26.47■■□□□ 1.83
DNMT1-212ENST00000587197 PREX1Q8TCU6 1659 aa26.47■■□□□ 1.83
DNMT1-212ENST00000587197 DHX29Q7Z478 1369 aaKnown RBP26.46■■□□□ 1.83
DNMT1-212ENST00000587197 SETD1BQ9UPS6 1966 aaKnown RBP26.46■■□□□ 1.83
DNMT1-212ENST00000587197 C3P01024 1663 aa26.45■■□□□ 1.82
DNMT1-212ENST00000587197 ABCC5O15440 1437 aa26.45■■□□□ 1.82
DNMT1-212ENST00000587197 FAM50AQ14320 339 aaKnown RBP26.44■■□□□ 1.82
DNMT1-212ENST00000587197 UHRF1BP1Q6BDS2 1440 aa26.44■■□□□ 1.82
DNMT1-212ENST00000587197 RRBP1Q9P2E9 1410 aaKnown RBP26.44■■□□□ 1.82
DNMT1-212ENST00000587197 MROH2AA6NES4 1674 aa26.41■■□□□ 1.82
DNMT1-212ENST00000587197 DAPK1P53355 1430 aa26.41■■□□□ 1.82
DNMT1-212ENST00000587197 ZMYM3Q14202 1370 aa26.41■■□□□ 1.82
DNMT1-212ENST00000587197 SHANK2Q9UPX8 1470 aa26.41■■□□□ 1.82
DNMT1-212ENST00000587197 MAST1Q9Y2H9 1570 aa26.41■■□□□ 1.82
DNMT1-212ENST00000587197 DNMT1P26358 1616 aaKnown RBP26.39■■□□□ 1.82
DNMT1-212ENST00000587197 KIF3BO15066 747 aa26.38■■□□□ 1.81
DNMT1-212ENST00000587197 NPATQ14207 1427 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms