RNA–Protein interactions for RNA: ENST00000587166.5

SSC5D-202, Transcript of scavenger receptor cysteine rich family member with 5 domains, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSC5D, Length 3,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5D-202ENST00000587166 HECW1Q76N89 1606 aa24.21■■□□□ 1.47
SSC5D-202ENST00000587166 ZNF608Q9ULD9 1512 aaPredicted RBP24.21■■□□□ 1.47
SSC5D-202ENST00000587166 POLR3GLQ9BT43 218 aa24.21■■□□□ 1.47
SSC5D-202ENST00000587166 ZNF644Q9H582 1327 aaPredicted RBP24.2■■□□□ 1.46
SSC5D-202ENST00000587166 MIA2Q96PC5 1412 aa24.19■■□□□ 1.46
SSC5D-202ENST00000587166 AKNAQ7Z591 1439 aa24.18■■□□□ 1.46
SSC5D-202ENST00000587166 MSH5O43196 834 aa24.18■■□□□ 1.46
SSC5D-202ENST00000587166 GCC2Q8IWJ2 1684 aa24.17■■□□□ 1.46
SSC5D-202ENST00000587166 TARBP1Q13395 1621 aaKnown RBP24.17■■□□□ 1.46
SSC5D-202ENST00000587166 PPP4R2Q9NY27 417 aa24.17■■□□□ 1.46
SSC5D-202ENST00000587166 ERICH6Q7L0X2 663 aa24.16■■□□□ 1.46
SSC5D-202ENST00000587166 ZNF326Q5BKZ1 582 aaKnown RBP24.15■■□□□ 1.46
SSC5D-202ENST00000587166 NCOA1Q15788 1441 aa24.15■■□□□ 1.46
SSC5D-202ENST00000587166 IQGAP2Q13576 1575 aa24.14■■□□□ 1.46
SSC5D-202ENST00000587166 ANKRD30BQ9BXX2 1392 aa24.13■■□□□ 1.45
SSC5D-202ENST00000587166 KIF7Q2M1P5 1343 aa24.13■■□□□ 1.45
SSC5D-202ENST00000587166 B4GALNT3Q6L9W6 998 aa24.13■■□□□ 1.45
SSC5D-202ENST00000587166 MRC2Q9UBG0 1479 aa24.12■■□□□ 1.45
SSC5D-202ENST00000587166 DAPK1P53355 1430 aa24.11■■□□□ 1.45
SSC5D-202ENST00000587166 ERICH6BQ5W0A0 696 aa24.1■■□□□ 1.45
SSC5D-202ENST00000587166 ZBED9Q6R2W3 1325 aa24.08■■□□□ 1.45
SSC5D-202ENST00000587166 RPRD2Q5VT52 1461 aaKnown RBP24.08■■□□□ 1.45
SSC5D-202ENST00000587166 ZNF777Q9ULD5 760 aaPredicted RBP24.08■■□□□ 1.45
SSC5D-202ENST00000587166 ABCC5O15440 1437 aa24.07■■□□□ 1.44
SSC5D-202ENST00000587166 FANCIQ9NVI1 1328 aa24.06■■□□□ 1.44
SSC5D-202ENST00000587166 ERCC6Q03468 1493 aa24.06■■□□□ 1.44
SSC5D-202ENST00000587166 WDR62O43379 1518 aa24.06■■□□□ 1.44
SSC5D-202ENST00000587166 CHMP7Q8WUX9 453 aaPredicted RBP24.05■■□□□ 1.44
SSC5D-202ENST00000587166 SENP3-EIF4A1A0A087X0R7 540 aa24.05■■□□□ 1.44
SSC5D-202ENST00000587166 ROCK1Q13464 1354 aa24.04■■□□□ 1.44
SSC5D-202ENST00000587166 CFDP1Q9UEE9 299 aaPredicted RBP24.02■■□□□ 1.44
SSC5D-202ENST00000587166 PBRM1Q86U86 1689 aa24.01■■□□□ 1.43
SSC5D-202ENST00000587166 TEX14Q8IWB6 1497 aa24.01■■□□□ 1.43
SSC5D-202ENST00000587166 ADAMTS12P58397 1594 aa23.98■■□□□ 1.43
SSC5D-202ENST00000587166 SPATA31E1Q6ZUB1 1445 aa23.97■■□□□ 1.43
SSC5D-202ENST00000587166 PKD2Q13563 968 aa23.95■■□□□ 1.42
SSC5D-202ENST00000587166 NUP153P49790 1475 aaKnown RBP23.93■■□□□ 1.42
SSC5D-202ENST00000587166 DNMT1P26358 1616 aaKnown RBP23.92■■□□□ 1.42
SSC5D-202ENST00000587166 PRG4Q92954 1404 aaPredicted RBP23.92■■□□□ 1.42
SSC5D-202ENST00000587166 USP47Q96K76 1375 aa23.92■■□□□ 1.42
SSC5D-202ENST00000587166 IFT140Q96RY7 1462 aa23.92■■□□□ 1.42
SSC5D-202ENST00000587166 DISP1Q96F81 1524 aa23.87■■□□□ 1.41
SSC5D-202ENST00000587166 PZPP20742 1482 aa23.87■■□□□ 1.41
SSC5D-202ENST00000587166 KIAA0586Q9BVV6 1533 aa23.87■■□□□ 1.41
SSC5D-202ENST00000587166 TMC1Q8TDI8 760 aa23.86■■□□□ 1.41
SSC5D-202ENST00000587166 KDM2AQ9Y2K7 1162 aa23.86■■□□□ 1.41
SSC5D-202ENST00000587166 NUDCQ9Y266 331 aa23.85■■□□□ 1.41
SSC5D-202ENST00000587166 DHX29Q7Z478 1369 aaKnown RBP23.84■■□□□ 1.41
SSC5D-202ENST00000587166 CCDC136Q96JN2 1154 aa23.84■■□□□ 1.41
SSC5D-202ENST00000587166 KIAA0556O60303 1618 aa23.84■■□□□ 1.41
SSC5D-202ENST00000587166 CAMSAP2Q08AD1 1489 aa23.84■■□□□ 1.41
SSC5D-202ENST00000587166 CARD11Q9BXL7 1154 aa23.84■■□□□ 1.41
SSC5D-202ENST00000587166 KIAA1107Q9UPP5 1409 aa23.83■■□□□ 1.41
SSC5D-202ENST00000587166 TROQ12816 1431 aaPredicted RBP23.82■■□□□ 1.4
SSC5D-202ENST00000587166 RAPGEF6Q8TEU7 1601 aa23.81■■□□□ 1.4
SSC5D-202ENST00000587166 JPH4Q96JJ6 628 aa23.81■■□□□ 1.4
SSC5D-202ENST00000587166 SMG6Q86US8 1419 aaKnown RBP23.8■■□□□ 1.4
SSC5D-202ENST00000587166 GRIN2AQ12879 1464 aa23.8■■□□□ 1.4
SSC5D-202ENST00000587166 ANKRD30AQ9BXX3 1397 aa23.8■■□□□ 1.4
SSC5D-202ENST00000587166 EIF4G3O43432 1585 aaKnown RBP23.79■■□□□ 1.4
SSC5D-202ENST00000587166 NUP155O75694 1391 aa23.78■■□□□ 1.4
SSC5D-202ENST00000587166 PLB1Q6P1J6 1458 aa23.78■■□□□ 1.4
SSC5D-202ENST00000587166 GPATCH8Q9UKJ3 1502 aaKnown RBP23.77■■□□□ 1.4
SSC5D-202ENST00000587166 ANKRD50Q9ULJ7 1429 aa23.76■■□□□ 1.39
SSC5D-202ENST00000587166 PNISRQ8TF01 805 aaKnown RBP23.76■■□□□ 1.39
SSC5D-202ENST00000587166 ST20-MTHFSA0A0A6YYL1 179 aa23.74■■□□□ 1.39
SSC5D-202ENST00000587166 DCAF11Q8TEB1 546 aa23.73■■□□□ 1.39
SSC5D-202ENST00000587166 SALL2Q9Y467 1007 aaPredicted RBP23.73■■□□□ 1.39
SSC5D-202ENST00000587166 MBD5Q9P267 1494 aa23.73■■□□□ 1.39
SSC5D-202ENST00000587166 PLEKHD1A6NEE1 506 aa23.73■■□□□ 1.39
SSC5D-202ENST00000587166 BCORL1Q5H9F3 1711 aa23.72■■□□□ 1.39
SSC5D-202ENST00000587166 TSPY4P0CV99 314 aa23.72■■□□□ 1.39
SSC5D-202ENST00000587166 TSPY10P0CW01 314 aa23.72■■□□□ 1.39
SSC5D-202ENST00000587166 ARID4BQ4LE39 1312 aaPredicted RBP23.71■■□□□ 1.39
SSC5D-202ENST00000587166 POLR1AO95602 1720 aaPredicted RBP23.7■■□□□ 1.39
SSC5D-202ENST00000587166 NOP58Q9Y2X3 529 aaKnown RBP23.7■■□□□ 1.38
SSC5D-202ENST00000587166 ROCK2O75116 1388 aaKnown RBP23.68■■□□□ 1.38
SSC5D-202ENST00000587166 KIF14Q15058 1648 aa23.68■■□□□ 1.38
SSC5D-202ENST00000587166 NBR1Q14596 966 aa23.68■■□□□ 1.38
SSC5D-202ENST00000587166 KIF15Q9NS87 1388 aa23.67■■□□□ 1.38
SSC5D-202ENST00000587166 ADGRL2O95490 1459 aa23.65■■□□□ 1.38
SSC5D-202ENST00000587166 HNRNPMP52272 730 aaKnown RBP eCLIP23.65■■□□□ 1.38
SSC5D-202ENST00000587166 RNF123Q5XPI4 1314 aa23.65■■□□□ 1.38
SSC5D-202ENST00000587166 PAK3O75914 559 aaPredicted RBP23.64■■□□□ 1.38
SSC5D-202ENST00000587166 KDM5CP41229 1560 aa23.64■■□□□ 1.37
SSC5D-202ENST00000587166 ANP32AP39687 249 aaKnown RBP23.64■■□□□ 1.37
SSC5D-202ENST00000587166 ITSN2Q9NZM3 1697 aa23.64■■□□□ 1.37
SSC5D-202ENST00000587166 CEP170Q5SW79 1584 aa23.63■■□□□ 1.37
SSC5D-202ENST00000587166 CARMIL2Q6F5E8 1435 aa23.62■■□□□ 1.37
SSC5D-202ENST00000587166 ADGBQ8N7X0 1667 aa23.62■■□□□ 1.37
SSC5D-202ENST00000587166 MYBBP1AQ9BQG0 1328 aaKnown RBP23.62■■□□□ 1.37
SSC5D-202ENST00000587166 SYNJ2O15056 1496 aa23.62■■□□□ 1.37
SSC5D-202ENST00000587166 C9orf84Q5VXU9 1444 aa23.62■■□□□ 1.37
SSC5D-202ENST00000587166 RGL3Q3MIN7 710 aa23.61■■□□□ 1.37
SSC5D-202ENST00000587166 RALGAPBQ86X10 1494 aa23.61■■□□□ 1.37
SSC5D-202ENST00000587166 RALBP1Q15311 655 aa23.6■■□□□ 1.37
SSC5D-202ENST00000587166 UHRF1BP1Q6BDS2 1440 aa23.59■■□□□ 1.37
SSC5D-202ENST00000587166 MAGI1Q96QZ7 1491 aaPredicted RBP23.58■■□□□ 1.36
SSC5D-202ENST00000587166 DEKP35659 375 aaKnown RBP23.57■■□□□ 1.36
SSC5D-202ENST00000587166 MYT1LQ9UL68 1186 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms