RNA–Protein interactions for RNA: ENST00000586833.5

TPM4-205, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-205ENST00000586833 ADGRL1O94910 1474 aa22.03■■□□□ 1.12
TPM4-205ENST00000586833 LRRC9Q6ZRR7 1453 aa22.02■■□□□ 1.12
TPM4-205ENST00000586833 MYO5CQ9NQX4 1742 aa22.01■■□□□ 1.11
TPM4-205ENST00000586833 RAPGEF3O95398 923 aa22.01■■□□□ 1.11
TPM4-205ENST00000586833 SCAPERQ9BY12 1400 aa22■■□□□ 1.11
TPM4-205ENST00000586833 GPATCH8Q9UKJ3 1502 aaKnown RBP21.98■■□□□ 1.11
TPM4-205ENST00000586833 ZNF777Q9ULD5 760 aaPredicted RBP21.98■■□□□ 1.11
TPM4-205ENST00000586833 NCOA2Q15596 1464 aa21.96■■□□□ 1.11
TPM4-205ENST00000586833 PLEKHH2Q8IVE3 1493 aa21.96■■□□□ 1.11
TPM4-205ENST00000586833 PREX2Q70Z35 1606 aa21.95■■□□□ 1.1
TPM4-205ENST00000586833 SUPT6HQ7KZ85 1726 aaKnown RBP21.94■■□□□ 1.1
TPM4-205ENST00000586833 KANK4Q5T7N3 995 aaPredicted RBP21.93■■□□□ 1.1
TPM4-205ENST00000586833 POGZQ7Z3K3 1410 aa21.93■■□□□ 1.1
TPM4-205ENST00000586833 MYT1LQ9UL68 1186 aa21.92■■□□□ 1.1
TPM4-205ENST00000586833 ZNF518AQ6AHZ1 1483 aa21.91■■□□□ 1.1
TPM4-205ENST00000586833 MAGI2Q86UL8 1455 aa21.9■■□□□ 1.1
TPM4-205ENST00000586833 KIAA1107Q9UPP5 1409 aa21.89■■□□□ 1.1
TPM4-205ENST00000586833 ITSN2Q9NZM3 1697 aa21.87■■□□□ 1.09
TPM4-205ENST00000586833 ABCC1P33527 1531 aa21.85■■□□□ 1.09
TPM4-205ENST00000586833 RSPH4AQ5TD94 716 aa21.85■■□□□ 1.09
TPM4-205ENST00000586833 AFAP1Q8N556 730 aa21.85■■□□□ 1.09
TPM4-205ENST00000586833 ZMYM4Q5VZL5 1548 aa21.85■■□□□ 1.09
TPM4-205ENST00000586833 CDC42BPAQ5VT25 1732 aa21.84■■□□□ 1.09
TPM4-205ENST00000586833 CDC42BPBQ9Y5S2 1711 aa21.84■■□□□ 1.09
TPM4-205ENST00000586833 FRMPD1Q5SYB0 1578 aa21.83■■□□□ 1.09
TPM4-205ENST00000586833 HNRNPMP52272 730 aaKnown RBP eCLIP21.83■■□□□ 1.09
TPM4-205ENST00000586833 MIA2Q96PC5 1412 aa21.82■■□□□ 1.08
TPM4-205ENST00000586833 MYOM3Q5VTT5 1437 aa21.81■■□□□ 1.08
TPM4-205ENST00000586833 ZFYVE16Q7Z3T8 1539 aa21.81■■□□□ 1.08
TPM4-205ENST00000586833 ARID4BQ4LE39 1312 aaPredicted RBP21.8■■□□□ 1.08
TPM4-205ENST00000586833 RICTORQ6R327 1708 aa21.8■■□□□ 1.08
TPM4-205ENST00000586833 TRAPPC8Q9Y2L5 1435 aa21.8■■□□□ 1.08
TPM4-205ENST00000586833 SPAG9O60271 1321 aaKnown RBP21.8■■□□□ 1.08
TPM4-205ENST00000586833 SAMD9LQ8IVG5 1584 aa21.79■■□□□ 1.08
TPM4-205ENST00000586833 SYCP2Q9BX26 1530 aa21.79■■□□□ 1.08
TPM4-205ENST00000586833 AEBP2Q6ZN18 517 aaPredicted RBP21.78■■□□□ 1.08
TPM4-205ENST00000586833 ARHGEF12Q9NZN5 1544 aa21.78■■□□□ 1.08
TPM4-205ENST00000586833 MLH3Q9UHC1 1453 aa21.77■■□□□ 1.08
TPM4-205ENST00000586833 ARHGEF40Q8TER5 1519 aa21.77■■□□□ 1.08
TPM4-205ENST00000586833 KDM5CP41229 1560 aa21.77■■□□□ 1.08
TPM4-205ENST00000586833 ZNF644Q9H582 1327 aaPredicted RBP21.77■■□□□ 1.07
TPM4-205ENST00000586833 TSPY4P0CV99 314 aa21.76■■□□□ 1.07
TPM4-205ENST00000586833 TSPY10P0CW01 314 aa21.76■■□□□ 1.07
TPM4-205ENST00000586833 ATP10AO60312 1499 aa21.75■■□□□ 1.07
TPM4-205ENST00000586833 CAMSAP2Q08AD1 1489 aa21.75■■□□□ 1.07
TPM4-205ENST00000586833 YEATS2Q9ULM3 1422 aa21.74■■□□□ 1.07
TPM4-205ENST00000586833 C9orf84Q5VXU9 1444 aa21.73■■□□□ 1.07
TPM4-205ENST00000586833 HECW2Q9P2P5 1572 aa21.73■■□□□ 1.07
TPM4-205ENST00000586833 CCDC141Q6ZP82 1450 aa21.71■■□□□ 1.07
TPM4-205ENST00000586833 MBD5Q9P267 1494 aa21.71■■□□□ 1.07
TPM4-205ENST00000586833 FGD6Q6ZV73 1430 aa21.69■■□□□ 1.06
TPM4-205ENST00000586833 RTEL1-TNFRSF6BF6WH68 1400 aa21.68■■□□□ 1.06
TPM4-205ENST00000586833 KDM4FA0A1W2PPD8 638 aa21.66■■□□□ 1.06
TPM4-205ENST00000586833 ARHGEF5Q12774 1597 aa21.64■■□□□ 1.05
TPM4-205ENST00000586833 ATP7AQ04656 1500 aa21.64■■□□□ 1.05
TPM4-205ENST00000586833 FAM50AQ14320 339 aaKnown RBP21.62■■□□□ 1.05
TPM4-205ENST00000586833 DIP2CQ9Y2E4 1556 aa21.61■■□□□ 1.05
TPM4-205ENST00000586833 TCOF1Q13428 1488 aaKnown RBP21.61■■□□□ 1.05
TPM4-205ENST00000586833 REREQ9P2R6 1566 aa21.61■■□□□ 1.05
TPM4-205ENST00000586833 PTPN23Q9H3S7 1636 aa21.6■■□□□ 1.05
TPM4-205ENST00000586833 MLECQ14165 292 aa21.6■■□□□ 1.05
TPM4-205ENST00000586833 PPARGC1BQ86YN6 1023 aaKnown RBP21.6■■□□□ 1.05
TPM4-205ENST00000586833 ESF1Q9H501 851 aaKnown RBP21.6■■□□□ 1.05
TPM4-205ENST00000586833 A2MP01023 1474 aa21.58■■□□□ 1.05
TPM4-205ENST00000586833 INO80Q9ULG1 1556 aaPredicted RBP21.57■■□□□ 1.04
TPM4-205ENST00000586833 AGLP35573 1532 aa21.57■■□□□ 1.04
TPM4-205ENST00000586833 ABCA6Q8N139 1617 aa21.57■■□□□ 1.04
TPM4-205ENST00000586833 KIDINS220Q9ULH0 1771 aa21.56■■□□□ 1.04
TPM4-205ENST00000586833 DHX29Q7Z478 1369 aaKnown RBP21.55■■□□□ 1.04
TPM4-205ENST00000586833 SHANK2Q9UPX8 1470 aa21.54■■□□□ 1.04
TPM4-205ENST00000586833 DAPK1P53355 1430 aa21.54■■□□□ 1.04
TPM4-205ENST00000586833 ABCC5O15440 1437 aa21.53■■□□□ 1.04
TPM4-205ENST00000586833 MAST1Q9Y2H9 1570 aa21.52■■□□□ 1.04
TPM4-205ENST00000586833 PPP6R1Q9UPN7 881 aa21.51■■□□□ 1.03
TPM4-205ENST00000586833 BCORL1Q5H9F3 1711 aa21.51■■□□□ 1.03
TPM4-205ENST00000586833 ANKRD30AQ9BXX3 1397 aa21.5■■□□□ 1.03
TPM4-205ENST00000586833 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.5■■□□□ 1.038e-48■■■■□ 23.3
TPM4-205ENST00000586833 ADGBQ8N7X0 1667 aa21.47■■□□□ 1.03
TPM4-205ENST00000586833 GGT6Q6P531 493 aa21.47■■□□□ 1.03
TPM4-205ENST00000586833 DNMT1P26358 1616 aaKnown RBP21.47■■□□□ 1.03
TPM4-205ENST00000586833 ADAMTSL3P82987 1691 aa21.47■■□□□ 1.03
TPM4-205ENST00000586833 CNTLNQ9NXG0 1405 aa21.46■■□□□ 1.03
TPM4-205ENST00000586833 KIF3BO15066 747 aa21.46■■□□□ 1.03
TPM4-205ENST00000586833 KIF15Q9NS87 1388 aa21.46■■□□□ 1.03
TPM4-205ENST00000586833 PTPRMP28827 1452 aa21.45■■□□□ 1.03
TPM4-205ENST00000586833 PLXNC1O60486 1568 aa21.45■■□□□ 1.02
TPM4-205ENST00000586833 RRP7BPQ9NSQ0 103 aa21.45■■□□□ 1.02
TPM4-205ENST00000586833 CHIC2Q9UKJ5 165 aa21.45■■□□□ 1.02
TPM4-205ENST00000586833 DUOX2Q9NRD8 1548 aa21.43■■□□□ 1.02
TPM4-205ENST00000586833 MADDQ8WXG6 1647 aa21.42■■□□□ 1.02
TPM4-205ENST00000586833 RRBP1Q9P2E9 1410 aaKnown RBP21.42■■□□□ 1.02
TPM4-205ENST00000586833 ERBINQ96RT1 1412 aa21.39■■□□□ 1.02
TPM4-205ENST00000586833 ITGAEP38570 1179 aa21.39■■□□□ 1.01
TPM4-205ENST00000586833 PLPPR3Q6T4P5 718 aa21.39■■□□□ 1.01
TPM4-205ENST00000586833 ADGRL2O95490 1459 aa21.39■■□□□ 1.01
TPM4-205ENST00000586833 NCOA1Q15788 1441 aa21.38■■□□□ 1.01
TPM4-205ENST00000586833 SIGLEC1Q9BZZ2 1709 aa21.38■■□□□ 1.01
TPM4-205ENST00000586833 CROCC2H7BZ55 1655 aa21.37■■□□□ 1.01
TPM4-205ENST00000586833 ROCK1Q13464 1354 aa21.36■■□□□ 1.01
TPM4-205ENST00000586833 WASHC2CQ9Y4E1 1318 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms