RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 EFCAB2Q5VUJ9 269 aa29.89■■■□□ 2.38
DDX39A-204ENST00000586558 ARHGAP5Q13017 1502 aa29.89■■■□□ 2.38
DDX39A-204ENST00000586558 CDC42BPAQ5VT25 1732 aa29.87■■■□□ 2.37
DDX39A-204ENST00000586558 KDM6BO15054 1643 aa29.85■■■□□ 2.37
DDX39A-204ENST00000586558 AKNAQ7Z591 1439 aa29.84■■■□□ 2.37
DDX39A-204ENST00000586558 ITSN2Q9NZM3 1697 aa29.84■■■□□ 2.37
DDX39A-204ENST00000586558 CDC42BPBQ9Y5S2 1711 aa29.84■■■□□ 2.37
DDX39A-204ENST00000586558 CFDP1Q9UEE9 299 aaPredicted RBP29.8■■■□□ 2.36
DDX39A-204ENST00000586558 ADGRL1O94910 1474 aa29.78■■■□□ 2.36
DDX39A-204ENST00000586558 COL17A1Q9UMD9 1497 aaPredicted RBP29.78■■■□□ 2.36
DDX39A-204ENST00000586558 MYOM3Q5VTT5 1437 aa29.75■■■□□ 2.35
DDX39A-204ENST00000586558 DENND4BO75064 1496 aaPredicted RBP29.74■■■□□ 2.35
DDX39A-204ENST00000586558 PLEKHH2Q8IVE3 1493 aa29.73■■■□□ 2.35
DDX39A-204ENST00000586558 SCAPERQ9BY12 1400 aa29.72■■■□□ 2.35
DDX39A-204ENST00000586558 ABCC1P33527 1531 aa29.71■■■□□ 2.35
DDX39A-204ENST00000586558 MIA2Q96PC5 1412 aa29.71■■■□□ 2.35
DDX39A-204ENST00000586558 SAMD9LQ8IVG5 1584 aa29.7■■■□□ 2.35
DDX39A-204ENST00000586558 ZNF777Q9ULD5 760 aaPredicted RBP29.69■■■□□ 2.34
DDX39A-204ENST00000586558 POGZQ7Z3K3 1410 aa29.68■■■□□ 2.34
DDX39A-204ENST00000586558 KIAA1107Q9UPP5 1409 aa29.68■■■□□ 2.34
DDX39A-204ENST00000586558 FRMPD1Q5SYB0 1578 aa29.64■■■□□ 2.34
DDX39A-204ENST00000586558 RAPGEF3O95398 923 aa29.64■■■□□ 2.34
DDX39A-204ENST00000586558 ZNF518AQ6AHZ1 1483 aa29.63■■■□□ 2.33
DDX39A-204ENST00000586558 RICTORQ6R327 1708 aa29.63■■■□□ 2.33
DDX39A-204ENST00000586558 CAMSAP2Q08AD1 1489 aa29.62■■■□□ 2.33
DDX39A-204ENST00000586558 FGD6Q6ZV73 1430 aa29.62■■■□□ 2.33
DDX39A-204ENST00000586558 SYCP2Q9BX26 1530 aa29.61■■■□□ 2.33
DDX39A-204ENST00000586558 ARHGEF12Q9NZN5 1544 aa29.61■■■□□ 2.33
DDX39A-204ENST00000586558 ZNF644Q9H582 1327 aaPredicted RBP29.6■■■□□ 2.33
DDX39A-204ENST00000586558 ZMYM4Q5VZL5 1548 aa29.6■■■□□ 2.33
DDX39A-204ENST00000586558 PPARGC1BQ86YN6 1023 aaKnown RBP29.58■■■□□ 2.33
DDX39A-204ENST00000586558 KDM5CP41229 1560 aa29.56■■■□□ 2.32
DDX39A-204ENST00000586558 TRAPPC8Q9Y2L5 1435 aa29.56■■■□□ 2.32
DDX39A-204ENST00000586558 MAGI2Q86UL8 1455 aa29.55■■■□□ 2.32
DDX39A-204ENST00000586558 MBD5Q9P267 1494 aa29.55■■■□□ 2.32
DDX39A-204ENST00000586558 HNRNPMP52272 730 aaKnown RBP eCLIP29.54■■■□□ 2.324e-15■■■■■ 28.5
DDX39A-204ENST00000586558 PTPN23Q9H3S7 1636 aa29.53■■■□□ 2.32
DDX39A-204ENST00000586558 TCOF1Q13428 1488 aaKnown RBP29.53■■■□□ 2.32
DDX39A-204ENST00000586558 AFAP1Q8N556 730 aa29.52■■■□□ 2.32
DDX39A-204ENST00000586558 RSPH4AQ5TD94 716 aa29.51■■■□□ 2.31
DDX39A-204ENST00000586558 ARHGEF5Q12774 1597 aa29.51■■■□□ 2.31
DDX39A-204ENST00000586558 CCDC141Q6ZP82 1450 aa29.48■■■□□ 2.31
DDX39A-204ENST00000586558 MLH3Q9UHC1 1453 aa29.48■■■□□ 2.31
DDX39A-204ENST00000586558 HECW2Q9P2P5 1572 aa29.47■■■□□ 2.31
DDX39A-204ENST00000586558 ZFYVE16Q7Z3T8 1539 aa29.46■■■□□ 2.31
DDX39A-204ENST00000586558 ARHGEF40Q8TER5 1519 aa29.46■■■□□ 2.31
DDX39A-204ENST00000586558 SPAG9O60271 1321 aaKnown RBP29.44■■■□□ 2.3
DDX39A-204ENST00000586558 YEATS2Q9ULM3 1422 aa29.4■■■□□ 2.3
DDX39A-204ENST00000586558 INO80Q9ULG1 1556 aaPredicted RBP29.39■■■□□ 2.3
DDX39A-204ENST00000586558 RTEL1-TNFRSF6BF6WH68 1400 aa29.39■■■□□ 2.3
DDX39A-204ENST00000586558 ATP7AQ04656 1500 aa29.39■■■□□ 2.3
DDX39A-204ENST00000586558 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.39■■■□□ 2.294e-9■□□□□ 10.2
DDX39A-204ENST00000586558 MYT1LQ9UL68 1186 aa29.38■■■□□ 2.29
DDX39A-204ENST00000586558 RRBP1Q9P2E9 1410 aaKnown RBP29.37■■■□□ 2.29
DDX39A-204ENST00000586558 FAM50AQ14320 339 aaKnown RBP29.37■■■□□ 2.29
DDX39A-204ENST00000586558 DNMT1P26358 1616 aaKnown RBP29.36■■■□□ 2.29
DDX39A-204ENST00000586558 TSPY4P0CV99 314 aa29.36■■■□□ 2.29
DDX39A-204ENST00000586558 TSPY10P0CW01 314 aa29.36■■■□□ 2.29
DDX39A-204ENST00000586558 KIDINS220Q9ULH0 1771 aa29.36■■■□□ 2.29
DDX39A-204ENST00000586558 SHANK2Q9UPX8 1470 aa29.35■■■□□ 2.29
DDX39A-204ENST00000586558 ABCC5O15440 1437 aa29.34■■■□□ 2.29
DDX39A-204ENST00000586558 DAPK1P53355 1430 aa29.34■■■□□ 2.29
DDX39A-204ENST00000586558 ATP10AO60312 1499 aa29.34■■■□□ 2.29
DDX39A-204ENST00000586558 MAST1Q9Y2H9 1570 aa29.34■■■□□ 2.29
DDX39A-204ENST00000586558 DIP2CQ9Y2E4 1556 aa29.33■■■□□ 2.29
DDX39A-204ENST00000586558 ABCA6Q8N139 1617 aa29.31■■■□□ 2.28
DDX39A-204ENST00000586558 C9orf84Q5VXU9 1444 aa29.31■■■□□ 2.28
DDX39A-204ENST00000586558 CROCC2H7BZ55 1655 aa29.3■■■□□ 2.28
DDX39A-204ENST00000586558 REREQ9P2R6 1566 aa29.29■■■□□ 2.28
DDX39A-204ENST00000586558 PLXNC1O60486 1568 aa29.22■■■□□ 2.27
DDX39A-204ENST00000586558 ADGBQ8N7X0 1667 aa29.22■■■□□ 2.27
DDX39A-204ENST00000586558 A2MP01023 1474 aa29.2■■■□□ 2.26
DDX39A-204ENST00000586558 AGLP35573 1532 aa29.19■■■□□ 2.26
DDX39A-204ENST00000586558 ADGRL2O95490 1459 aa29.18■■■□□ 2.26
DDX39A-204ENST00000586558 ANKRD30AQ9BXX3 1397 aa29.17■■■□□ 2.26
DDX39A-204ENST00000586558 ARID4BQ4LE39 1312 aaPredicted RBP29.17■■■□□ 2.26
DDX39A-204ENST00000586558 DHX29Q7Z478 1369 aaKnown RBP29.15■■■□□ 2.26
DDX39A-204ENST00000586558 SIGLEC1Q9BZZ2 1709 aa29.14■■■□□ 2.25
DDX39A-204ENST00000586558 KIF15Q9NS87 1388 aa29.13■■■□□ 2.25
DDX39A-204ENST00000586558 PTPRKQ15262 1439 aa29.13■■■□□ 2.25
DDX39A-204ENST00000586558 NCOA1Q15788 1441 aa29.13■■■□□ 2.25
DDX39A-204ENST00000586558 CHIC2Q9UKJ5 165 aa29.13■■■□□ 2.25
DDX39A-204ENST00000586558 ROCK1Q13464 1354 aa29.12■■■□□ 2.25
DDX39A-204ENST00000586558 DUOX2Q9NRD8 1548 aa29.11■■■□□ 2.25
DDX39A-204ENST00000586558 ITGAEP38570 1179 aa29.09■■■□□ 2.25
DDX39A-204ENST00000586558 BCORL1Q5H9F3 1711 aa29.07■■■□□ 2.24
DDX39A-204ENST00000586558 RRP7BPQ9NSQ0 103 aa29.07■■■□□ 2.24
DDX39A-204ENST00000586558 ERBINQ96RT1 1412 aa29.05■■■□□ 2.24
DDX39A-204ENST00000586558 AEBP2Q6ZN18 517 aaPredicted RBP29.04■■■□□ 2.24
DDX39A-204ENST00000586558 EIF2AK4Q9P2K8 1649 aaKnown RBP29.03■■■□□ 2.24
DDX39A-204ENST00000586558 ADAMTSL3P82987 1691 aa29.01■■■□□ 2.23
DDX39A-204ENST00000586558 KIF3BO15066 747 aa28.98■■■□□ 2.23
DDX39A-204ENST00000586558 MLECQ14165 292 aa28.98■■■□□ 2.23
DDX39A-204ENST00000586558 KDM4FA0A1W2PPD8 638 aa28.97■■■□□ 2.23
DDX39A-204ENST00000586558 ANKRD50Q9ULJ7 1429 aa28.96■■■□□ 2.23
DDX39A-204ENST00000586558 PPP6R1Q9UPN7 881 aa28.95■■■□□ 2.22
DDX39A-204ENST00000586558 RNF17Q9BXT8 1623 aaKnown RBP28.94■■■□□ 2.22
DDX39A-204ENST00000586558 MADDQ8WXG6 1647 aa28.93■■■□□ 2.22
DDX39A-204ENST00000586558 FAM135AQ9P2D6 1515 aa28.92■■■□□ 2.22
DDX39A-204ENST00000586558 GGT6Q6P531 493 aa28.91■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms