RNA–Protein interactions for RNA: ENST00000585932.5

PTBP1-207, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-207ENST00000585932 POGZQ7Z3K3 1410 aa33.55■■■□□ 2.96
PTBP1-207ENST00000585932 ARHGAP5Q13017 1502 aa33.55■■■□□ 2.96
PTBP1-207ENST00000585932 EFCAB2Q5VUJ9 269 aa33.55■■■□□ 2.96
PTBP1-207ENST00000585932 ARHGEF40Q8TER5 1519 aa33.54■■■□□ 2.96
PTBP1-207ENST00000585932 PREX2Q70Z35 1606 aa33.52■■■□□ 2.96
PTBP1-207ENST00000585932 YEATS2Q9ULM3 1422 aa33.5■■■□□ 2.95
PTBP1-207ENST00000585932 CDC42BPAQ5VT25 1732 aa33.48■■■□□ 2.95
PTBP1-207ENST00000585932 SIGLEC1Q9BZZ2 1709 aa33.45■■■□□ 2.95
PTBP1-207ENST00000585932 ZFYVE16Q7Z3T8 1539 aa33.43■■■□□ 2.94
PTBP1-207ENST00000585932 ARHGEF12Q9NZN5 1544 aa33.43■■■□□ 2.94
PTBP1-207ENST00000585932 MAGI2Q86UL8 1455 aa33.41■■■□□ 2.94
PTBP1-207ENST00000585932 GPATCH8Q9UKJ3 1502 aaKnown RBP33.41■■■□□ 2.94
PTBP1-207ENST00000585932 ADAMTSL3P82987 1691 aa33.4■■■□□ 2.94
PTBP1-207ENST00000585932 ABCC1P33527 1531 aa33.39■■■□□ 2.94
PTBP1-207ENST00000585932 AFAP1Q8N556 730 aa33.38■■■□□ 2.93
PTBP1-207ENST00000585932 KDM5CP41229 1560 aa33.38■■■□□ 2.93
PTBP1-207ENST00000585932 MTUS2Q5JR59 1369 aa33.37■■■□□ 2.93
PTBP1-207ENST00000585932 BCORL1Q5H9F3 1711 aa33.37■■■□□ 2.93
PTBP1-207ENST00000585932 ZNF518AQ6AHZ1 1483 aa33.36■■■□□ 2.93
PTBP1-207ENST00000585932 VPS8Q8N3P4 1428 aa33.35■■■□□ 2.93
PTBP1-207ENST00000585932 TRAPPC8Q9Y2L5 1435 aa33.35■■■□□ 2.93
PTBP1-207ENST00000585932 EHBP1L1Q8N3D4 1523 aa33.33■■■□□ 2.93
PTBP1-207ENST00000585932 ITSN2Q9NZM3 1697 aa33.33■■■□□ 2.93
PTBP1-207ENST00000585932 SAMD9LQ8IVG5 1584 aa33.33■■■□□ 2.93
PTBP1-207ENST00000585932 ARID4BQ4LE39 1312 aaPredicted RBP33.31■■■□□ 2.92
PTBP1-207ENST00000585932 MADDQ8WXG6 1647 aa33.28■■■□□ 2.92
PTBP1-207ENST00000585932 TIAM1Q13009 1591 aa33.28■■■□□ 2.92
PTBP1-207ENST00000585932 CCNB3Q8WWL7 1395 aa33.26■■■□□ 2.92
PTBP1-207ENST00000585932 HECW2Q9P2P5 1572 aa33.26■■■□□ 2.91
PTBP1-207ENST00000585932 ATP10AO60312 1499 aa33.25■■■□□ 2.91
PTBP1-207ENST00000585932 ZNF777Q9ULD5 760 aaPredicted RBP33.25■■■□□ 2.91
PTBP1-207ENST00000585932 PTPRMP28827 1452 aa33.24■■■□□ 2.91
PTBP1-207ENST00000585932 SYCP2Q9BX26 1530 aa33.23■■■□□ 2.91
PTBP1-207ENST00000585932 DIP2CQ9Y2E4 1556 aa33.22■■■□□ 2.91
PTBP1-207ENST00000585932 MLH3Q9UHC1 1453 aa33.22■■■□□ 2.91
PTBP1-207ENST00000585932 C9orf84Q5VXU9 1444 aa33.21■■■□□ 2.91
PTBP1-207ENST00000585932 ABCA6Q8N139 1617 aa33.2■■■□□ 2.91
PTBP1-207ENST00000585932 CFDP1Q9UEE9 299 aaPredicted RBP33.2■■■□□ 2.91
PTBP1-207ENST00000585932 NCOA2Q15596 1464 aa33.18■■■□□ 2.9
PTBP1-207ENST00000585932 HNRNPMP52272 730 aaKnown RBP eCLIP33.17■■■□□ 2.94e-7■■■□□ 15
PTBP1-207ENST00000585932 KIDINS220Q9ULH0 1771 aa33.16■■■□□ 2.9
PTBP1-207ENST00000585932 ZNF644Q9H582 1327 aaPredicted RBP33.16■■■□□ 2.9
PTBP1-207ENST00000585932 RIMS1Q86UR5 1692 aaKnown RBP33.15■■■□□ 2.9
PTBP1-207ENST00000585932 KIAA1107Q9UPP5 1409 aa33.14■■■□□ 2.9
PTBP1-207ENST00000585932 LRRC9Q6ZRR7 1453 aa33.13■■■□□ 2.89
PTBP1-207ENST00000585932 SUPT6HQ7KZ85 1726 aaKnown RBP33.13■■■□□ 2.89
PTBP1-207ENST00000585932 MLECQ14165 292 aa33.12■■■□□ 2.89
PTBP1-207ENST00000585932 KANK4Q5T7N3 995 aaPredicted RBP33.11■■■□□ 2.89
PTBP1-207ENST00000585932 REREQ9P2R6 1566 aa33.1■■■□□ 2.89
PTBP1-207ENST00000585932 MYT1LQ9UL68 1186 aa33.1■■■□□ 2.89
PTBP1-207ENST00000585932 PLEKHH2Q8IVE3 1493 aa33.09■■■□□ 2.89
PTBP1-207ENST00000585932 MAP3K1Q13233 1512 aa33.08■■■□□ 2.89
PTBP1-207ENST00000585932 MBD5Q9P267 1494 aa33.06■■■□□ 2.88
PTBP1-207ENST00000585932 FER1L4A9Z1Z3 1794 aa33.04■■■□□ 2.88
PTBP1-207ENST00000585932 INO80Q9ULG1 1556 aaPredicted RBP33.03■■■□□ 2.88
PTBP1-207ENST00000585932 SPAG9O60271 1321 aaKnown RBP33.02■■■□□ 2.88
PTBP1-207ENST00000585932 ATP7AQ04656 1500 aa33.01■■■□□ 2.87
PTBP1-207ENST00000585932 AGLP35573 1532 aa32.99■■■□□ 2.87
PTBP1-207ENST00000585932 CAMSAP2Q08AD1 1489 aa32.98■■■□□ 2.87
PTBP1-207ENST00000585932 PLPPR3Q6T4P5 718 aa32.92■■■□□ 2.86
PTBP1-207ENST00000585932 PLXNC1O60486 1568 aa32.9■■■□□ 2.86
PTBP1-207ENST00000585932 LMTK3Q96Q04 1460 aa32.88■■■□□ 2.85
PTBP1-207ENST00000585932 CCDC141Q6ZP82 1450 aa32.86■■■□□ 2.85
PTBP1-207ENST00000585932 CEBPAP49715 358 aaPredicted RBP32.85■■■□□ 2.85
PTBP1-207ENST00000585932 A2MP01023 1474 aa32.85■■■□□ 2.85
PTBP1-207ENST00000585932 MYOM3Q5VTT5 1437 aa32.83■■■□□ 2.85
PTBP1-207ENST00000585932 RTEL1-TNFRSF6BF6WH68 1400 aa32.82■■■□□ 2.84
PTBP1-207ENST00000585932 ARHGEF5Q12774 1597 aa32.82■■■□□ 2.84
PTBP1-207ENST00000585932 ADGBQ8N7X0 1667 aa32.8■■■□□ 2.84
PTBP1-207ENST00000585932 MIA2Q96PC5 1412 aa32.77■■■□□ 2.84
PTBP1-207ENST00000585932 C3P01024 1663 aa32.75■■■□□ 2.83
PTBP1-207ENST00000585932 APLP2Q06481 763 aa32.75■■■□□ 2.83
PTBP1-207ENST00000585932 RSPH4AQ5TD94 716 aa32.72■■■□□ 2.83
PTBP1-207ENST00000585932 DHX29Q7Z478 1369 aaKnown RBP32.7■■■□□ 2.83
PTBP1-207ENST00000585932 HSPA2P54652 639 aa32.7■■■□□ 2.83
PTBP1-207ENST00000585932 CNTLNQ9NXG0 1405 aa32.67■■■□□ 2.82
PTBP1-207ENST00000585932 MAST1Q9Y2H9 1570 aa32.66■■■□□ 2.82
PTBP1-207ENST00000585932 PREX1Q8TCU6 1659 aa32.65■■■□□ 2.82
PTBP1-207ENST00000585932 PTPN23Q9H3S7 1636 aa32.64■■■□□ 2.82
PTBP1-207ENST00000585932 MROH2AA6NES4 1674 aa32.63■■■□□ 2.81
PTBP1-207ENST00000585932 CLTCQ00610 1675 aaKnown RBP32.63■■■□□ 2.81
PTBP1-207ENST00000585932 GGT6Q6P531 493 aa32.63■■■□□ 2.81
PTBP1-207ENST00000585932 ESF1Q9H501 851 aaKnown RBP32.63■■■□□ 2.81
PTBP1-207ENST00000585932 FGD6Q6ZV73 1430 aa32.62■■■□□ 2.81
PTBP1-207ENST00000585932 TSPY4P0CV99 314 aa32.61■■■□□ 2.81
PTBP1-207ENST00000585932 TSPY10P0CW01 314 aa32.61■■■□□ 2.81
PTBP1-207ENST00000585932 ZMYM3Q14202 1370 aa32.59■■■□□ 2.81
PTBP1-207ENST00000585932 TCOF1Q13428 1488 aaKnown RBP32.58■■■□□ 2.81
PTBP1-207ENST00000585932 ABCC5O15440 1437 aa32.58■■■□□ 2.81
PTBP1-207ENST00000585932 SETD1BQ9UPS6 1966 aaKnown RBP32.56■■■□□ 2.8
PTBP1-207ENST00000585932 KIF3BO15066 747 aa32.55■■■□□ 2.8
PTBP1-207ENST00000585932 CROCC2H7BZ55 1655 aa32.54■■■□□ 2.8
PTBP1-207ENST00000585932 UHRF1BP1Q6BDS2 1440 aa32.52■■■□□ 2.8
PTBP1-207ENST00000585932 DNMT1P26358 1616 aaKnown RBP32.5■■■□□ 2.79
PTBP1-207ENST00000585932 DAPK1P53355 1430 aa32.5■■■□□ 2.79
PTBP1-207ENST00000585932 SHANK2Q9UPX8 1470 aa32.49■■■□□ 2.79
PTBP1-207ENST00000585932 PPP6R1Q9UPN7 881 aa32.49■■■□□ 2.79
PTBP1-207ENST00000585932 NPATQ14207 1427 aa32.49■■■□□ 2.79
PTBP1-207ENST00000585932 PTPRKQ15262 1439 aa32.49■■■□□ 2.79
PTBP1-207ENST00000585932 RNF17Q9BXT8 1623 aaKnown RBP32.44■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms