RNA–Protein interactions for RNA: ENST00000585856.2

PTBP1-206, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 2

Gene PTBP1, Length 1,217 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-206ENST00000585856 KIF14Q15058 1648 aa43.75■■■■■ 4.59
PTBP1-206ENST00000585856 SCAPERQ9BY12 1400 aa43.73■■■■■ 4.59
PTBP1-206ENST00000585856 YEATS2Q9ULM3 1422 aa43.71■■■■■ 4.59
PTBP1-206ENST00000585856 LRRIQ1Q96JM4 1722 aa43.69■■■■■ 4.58
PTBP1-206ENST00000585856 TROQ12816 1431 aaPredicted RBP43.68■■■■■ 4.58
PTBP1-206ENST00000585856 SIGLEC1Q9BZZ2 1709 aa43.68■■■■■ 4.58
PTBP1-206ENST00000585856 PCF11O94913 1555 aaKnown RBP43.67■■■■■ 4.58
PTBP1-206ENST00000585856 EFCAB2Q5VUJ9 269 aa43.67■■■■■ 4.58
PTBP1-206ENST00000585856 CLIP1P30622 1438 aa43.65■■■■■ 4.58
PTBP1-206ENST00000585856 LMTK3Q96Q04 1460 aa43.58■■■■■ 4.57
PTBP1-206ENST00000585856 FER1L4A9Z1Z3 1794 aa43.57■■■■■ 4.56
PTBP1-206ENST00000585856 ARHGAP5Q13017 1502 aa43.56■■■■■ 4.56
PTBP1-206ENST00000585856 ATP10AO60312 1499 aa43.54■■■■■ 4.56
PTBP1-206ENST00000585856 ZNF518AQ6AHZ1 1483 aa43.54■■■■■ 4.56
PTBP1-206ENST00000585856 CCDC18Q5T9S5 1454 aa43.52■■■■■ 4.56
PTBP1-206ENST00000585856 C9orf84Q5VXU9 1444 aa43.51■■■■■ 4.56
PTBP1-206ENST00000585856 CASKIN1Q8WXD9 1431 aa43.5■■■■■ 4.55
PTBP1-206ENST00000585856 CDC42BPBQ9Y5S2 1711 aa43.49■■■■■ 4.55
PTBP1-206ENST00000585856 KDM5CP41229 1560 aa43.48■■■■■ 4.55
PTBP1-206ENST00000585856 PREX2Q70Z35 1606 aa43.44■■■■■ 4.54
PTBP1-206ENST00000585856 ARHGEF12Q9NZN5 1544 aa43.43■■■■■ 4.54
PTBP1-206ENST00000585856 MLECQ14165 292 aa43.42■■■■■ 4.54
PTBP1-206ENST00000585856 FYCO1Q9BQS8 1478 aa43.36■■■■■ 4.53
PTBP1-206ENST00000585856 AFAP1Q8N556 730 aa43.34■■■■■ 4.53
PTBP1-206ENST00000585856 PLPPR3Q6T4P5 718 aa43.33■■■■■ 4.53
PTBP1-206ENST00000585856 REREQ9P2R6 1566 aa43.32■■■■■ 4.52
PTBP1-206ENST00000585856 DIP2CQ9Y2E4 1556 aa43.31■■■■■ 4.52
PTBP1-206ENST00000585856 ABCC1P33527 1531 aa43.31■■■■■ 4.52
PTBP1-206ENST00000585856 CDC42BPAQ5VT25 1732 aa43.3■■■■■ 4.52
PTBP1-206ENST00000585856 FBXO41Q8TF61 875 aa43.29■■■■■ 4.52
PTBP1-206ENST00000585856 ITSN2Q9NZM3 1697 aa43.29■■■■■ 4.52
PTBP1-206ENST00000585856 MLH3Q9UHC1 1453 aa43.28■■■■■ 4.52
PTBP1-206ENST00000585856 MYT1LQ9UL68 1186 aa43.25■■■■■ 4.51
PTBP1-206ENST00000585856 ABCA6Q8N139 1617 aa43.24■■■■■ 4.51
PTBP1-206ENST00000585856 PREX1Q8TCU6 1659 aa43.24■■■■■ 4.51
PTBP1-206ENST00000585856 HSPA2P54652 639 aa43.23■■■■■ 4.51
PTBP1-206ENST00000585856 TRAPPC8Q9Y2L5 1435 aa43.18■■■■■ 4.5
PTBP1-206ENST00000585856 AGLP35573 1532 aa43.14■■■■■ 4.5
PTBP1-206ENST00000585856 KIDINS220Q9ULH0 1771 aa43.13■■■■■ 4.49
PTBP1-206ENST00000585856 SETD1BQ9UPS6 1966 aaKnown RBP43.12■■■■■ 4.49
PTBP1-206ENST00000585856 CEBPAP49715 358 aaPredicted RBP43.06■■■■■ 4.48
PTBP1-206ENST00000585856 SAMD9LQ8IVG5 1584 aa43.06■■■■■ 4.48
PTBP1-206ENST00000585856 GPATCH8Q9UKJ3 1502 aaKnown RBP43.03■■■■■ 4.48
PTBP1-206ENST00000585856 C3P01024 1663 aa43.02■■■■■ 4.48
PTBP1-206ENST00000585856 SYCP2Q9BX26 1530 aa42.99■■■■■ 4.47
PTBP1-206ENST00000585856 UHRF1BP1Q6BDS2 1440 aa42.98■■■■■ 4.47
PTBP1-206ENST00000585856 ZNF777Q9ULD5 760 aaPredicted RBP42.97■■■■■ 4.47
PTBP1-206ENST00000585856 ESF1Q9H501 851 aaKnown RBP42.96■■■■■ 4.47
PTBP1-206ENST00000585856 PLEKHH2Q8IVE3 1493 aa42.94■■■■■ 4.46
PTBP1-206ENST00000585856 KIAA1107Q9UPP5 1409 aa42.91■■■■■ 4.46
PTBP1-206ENST00000585856 CNTLNQ9NXG0 1405 aa42.9■■■■■ 4.46
PTBP1-206ENST00000585856 MTUS2Q5JR59 1369 aa42.9■■■■■ 4.46
PTBP1-206ENST00000585856 CCNB3Q8WWL7 1395 aa42.9■■■■■ 4.46
PTBP1-206ENST00000585856 STRCQ7RTU9 1775 aa42.89■■■■■ 4.46
PTBP1-206ENST00000585856 CFDP1Q9UEE9 299 aaPredicted RBP42.87■■■■■ 4.45
PTBP1-206ENST00000585856 SPAG9O60271 1321 aaKnown RBP42.87■■■■■ 4.45
PTBP1-206ENST00000585856 ATP7AQ04656 1500 aa42.86■■■■■ 4.45
PTBP1-206ENST00000585856 MROH2AA6NES4 1674 aa42.84■■■■■ 4.45
PTBP1-206ENST00000585856 INO80Q9ULG1 1556 aaPredicted RBP42.84■■■■■ 4.45
PTBP1-206ENST00000585856 DMRT2Q9Y5R5 561 aa42.84■■■■■ 4.45
PTBP1-206ENST00000585856 HNRNPMP52272 730 aaKnown RBP eCLIP42.83■■■■■ 4.45
PTBP1-206ENST00000585856 SUPT6HQ7KZ85 1726 aaKnown RBP42.82■■■■■ 4.44
PTBP1-206ENST00000585856 CERKQ8TCT0 537 aa42.81■■■■■ 4.44
PTBP1-206ENST00000585856 EHBP1L1Q8N3D4 1523 aa42.8■■■■■ 4.44
PTBP1-206ENST00000585856 PLXNC1O60486 1568 aa42.76■■■■■ 4.44
PTBP1-206ENST00000585856 TIAM1Q13009 1591 aa42.75■■■■■ 4.43
PTBP1-206ENST00000585856 CEP162Q5TB80 1403 aa42.71■■■■■ 4.43
PTBP1-206ENST00000585856 ADGBQ8N7X0 1667 aa42.7■■■■■ 4.43
PTBP1-206ENST00000585856 A2MP01023 1474 aa42.7■■■■■ 4.43
PTBP1-206ENST00000585856 NPATQ14207 1427 aa42.69■■■■■ 4.42
PTBP1-206ENST00000585856 PTPRTO14522 1441 aa42.64■■■■■ 4.42
PTBP1-206ENST00000585856 CLTCQ00610 1675 aaKnown RBP42.64■■■■■ 4.42
PTBP1-206ENST00000585856 ZMYM3Q14202 1370 aa42.64■■■■■ 4.42
PTBP1-206ENST00000585856 MBD5Q9P267 1494 aa42.59■■■■■ 4.41
PTBP1-206ENST00000585856 ZNF644Q9H582 1327 aaPredicted RBP42.56■■■■■ 4.4
PTBP1-206ENST00000585856 RTEL1-TNFRSF6BF6WH68 1400 aa42.55■■■■■ 4.4
PTBP1-206ENST00000585856 NCOA1Q15788 1441 aa42.54■■■■■ 4.4
PTBP1-206ENST00000585856 PPP6R1Q9UPN7 881 aa42.52■■■■■ 4.4
PTBP1-206ENST00000585856 ZNF142P52746 1687 aaPredicted RBP42.5■■■■■ 4.39
PTBP1-206ENST00000585856 CAMSAP1Q5T5Y3 1602 aa42.49■■■■■ 4.39
PTBP1-206ENST00000585856 GGT6Q6P531 493 aa42.48■■■■■ 4.39
PTBP1-206ENST00000585856 MYO3AQ8NEV4 1616 aa42.47■■■■■ 4.39
PTBP1-206ENST00000585856 NCOA2Q15596 1464 aa42.47■■■■■ 4.39
PTBP1-206ENST00000585856 PTPRKQ15262 1439 aa42.44■■■■■ 4.38
PTBP1-206ENST00000585856 CCDC141Q6ZP82 1450 aa42.43■■■■■ 4.38
PTBP1-206ENST00000585856 CAMSAP2Q08AD1 1489 aa42.42■■■■■ 4.38
PTBP1-206ENST00000585856 RSPH4AQ5TD94 716 aa42.4■■■■■ 4.38
PTBP1-206ENST00000585856 DHX29Q7Z478 1369 aaKnown RBP42.39■■■■■ 4.38
PTBP1-206ENST00000585856 CEP170BQ9Y4F5 1589 aaPredicted RBP42.39■■■■■ 4.38
PTBP1-206ENST00000585856 LTBP4Q8N2S1 1624 aa42.37■■■■■ 4.37
PTBP1-206ENST00000585856 PLA2R1Q13018 1463 aa42.36■■■■■ 4.37
PTBP1-206ENST00000585856 FAM135AQ9P2D6 1515 aa42.33■■■■■ 4.37
PTBP1-206ENST00000585856 ARHGEF5Q12774 1597 aa42.31■■■■■ 4.36
PTBP1-206ENST00000585856 IQSEC2Q5JU85 1478 aa42.31■■■■■ 4.36
PTBP1-206ENST00000585856 VPS8Q8N3P4 1428 aa42.3■■■■■ 4.36
PTBP1-206ENST00000585856 PKD2Q13563 968 aa42.26■■■■■ 4.36
PTBP1-206ENST00000585856 LRRC9Q6ZRR7 1453 aa42.25■■■■■ 4.35
PTBP1-206ENST00000585856 KDM5DQ9BY66 1539 aa42.24■■■■■ 4.35
PTBP1-206ENST00000585856 TCOF1Q13428 1488 aaKnown RBP42.23■■■■■ 4.35
PTBP1-206ENST00000585856 KIF3BO15066 747 aa42.23■■■■■ 4.35
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms