RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 IFT140Q96RY7 1462 aa19.78■□□□□ 0.76
CDK5RAP3-237ENST00000585163 ABCC5O15440 1437 aa19.76■□□□□ 0.75
CDK5RAP3-237ENST00000585163 NUP153P49790 1475 aaKnown RBP19.76■□□□□ 0.75
CDK5RAP3-237ENST00000585163 ANKRD30BQ9BXX2 1392 aa19.76■□□□□ 0.75
CDK5RAP3-237ENST00000585163 ZNF608Q9ULD9 1512 aaPredicted RBP19.76■□□□□ 0.75
CDK5RAP3-237ENST00000585163 RPRD2Q5VT52 1461 aaKnown RBP19.76■□□□□ 0.75
CDK5RAP3-237ENST00000585163 FOXD1Q16676 465 aa19.74■□□□□ 0.75
CDK5RAP3-237ENST00000585163 CNTLNQ9NXG0 1405 aa19.74■□□□□ 0.75
CDK5RAP3-237ENST00000585163 RAPGEF6Q8TEU7 1601 aa19.73■□□□□ 0.75
CDK5RAP3-237ENST00000585163 HNRNPUQ00839 825 aaKnown RBP eCLIP19.73■□□□□ 0.75
CDK5RAP3-237ENST00000585163 NCOA1Q15788 1441 aa19.73■□□□□ 0.75
CDK5RAP3-237ENST00000585163 TEX14Q8IWB6 1497 aa19.72■□□□□ 0.75
CDK5RAP3-237ENST00000585163 ZNF644Q9H582 1327 aaPredicted RBP19.7■□□□□ 0.74
CDK5RAP3-237ENST00000585163 CDK11AQ9UQ88 783 aaPredicted RBP19.7■□□□□ 0.74
CDK5RAP3-237ENST00000585163 CCDC7Q96M83 1385 aa19.69■□□□□ 0.74
CDK5RAP3-237ENST00000585163 GRIN2AQ12879 1464 aa19.69■□□□□ 0.74
CDK5RAP3-237ENST00000585163 C11orf95C9JLR9 678 aaPredicted RBP19.68■□□□□ 0.74
CDK5RAP3-237ENST00000585163 NBPF8Q3BBV2 869 aa19.67■□□□□ 0.74
CDK5RAP3-237ENST00000585163 SLC4A1APQ9BWU0 796 aaKnown RBP19.66■□□□□ 0.74
CDK5RAP3-237ENST00000585163 SPATA31E1Q6ZUB1 1445 aa19.65■□□□□ 0.74
CDK5RAP3-237ENST00000585163 TROQ12816 1431 aaPredicted RBP19.64■□□□□ 0.73
CDK5RAP3-237ENST00000585163 SLC24A1O60721 1099 aa19.64■□□□□ 0.73
CDK5RAP3-237ENST00000585163 PRKRIP1Q9H875 184 aaPredicted RBP19.64■□□□□ 0.73
CDK5RAP3-237ENST00000585163 EIF4G3O43432 1585 aaKnown RBP19.64■□□□□ 0.73
CDK5RAP3-237ENST00000585163 POLR1AO95602 1720 aaPredicted RBP19.63■□□□□ 0.73
CDK5RAP3-237ENST00000585163 BCL11AQ9H165 835 aa19.62■□□□□ 0.73
CDK5RAP3-237ENST00000585163 CAMSAP2Q08AD1 1489 aa19.62■□□□□ 0.73
CDK5RAP3-237ENST00000585163 ANP32EQ9BTT0 268 aa19.62■□□□□ 0.73
CDK5RAP3-237ENST00000585163 PRG4Q92954 1404 aaPredicted RBP19.62■□□□□ 0.73
CDK5RAP3-237ENST00000585163 PZPP20742 1482 aa19.62■□□□□ 0.73
CDK5RAP3-237ENST00000585163 ITSN2Q9NZM3 1697 aa19.61■□□□□ 0.73
CDK5RAP3-237ENST00000585163 CCDC184Q52MB2 194 aa19.61■□□□□ 0.73
CDK5RAP3-237ENST00000585163 RBM19Q9Y4C8 960 aaKnown RBP19.61■□□□□ 0.73
CDK5RAP3-237ENST00000585163 ADGBQ8N7X0 1667 aa19.59■□□□□ 0.73
CDK5RAP3-237ENST00000585163 CFDP1Q9UEE9 299 aaPredicted RBP19.59■□□□□ 0.73
CDK5RAP3-237ENST00000585163 GPATCH8Q9UKJ3 1502 aaKnown RBP19.58■□□□□ 0.73
CDK5RAP3-237ENST00000585163 KIF7Q2M1P5 1343 aa19.58■□□□□ 0.73
CDK5RAP3-237ENST00000585163 ADCY10Q96PN6 1610 aa19.58■□□□□ 0.72
CDK5RAP3-237ENST00000585163 ADGRL2O95490 1459 aa19.58■□□□□ 0.72
CDK5RAP3-237ENST00000585163 MAGI1Q96QZ7 1491 aaPredicted RBP19.57■□□□□ 0.72
CDK5RAP3-237ENST00000585163 PLB1Q6P1J6 1458 aa19.56■□□□□ 0.72
CDK5RAP3-237ENST00000585163 CROCC2H7BZ55 1655 aa19.55■□□□□ 0.72
CDK5RAP3-237ENST00000585163 MBD5Q9P267 1494 aa19.55■□□□□ 0.72
CDK5RAP3-237ENST00000585163 KIF14Q15058 1648 aa19.55■□□□□ 0.72
CDK5RAP3-237ENST00000585163 CEP170Q5SW79 1584 aa19.55■□□□□ 0.72
CDK5RAP3-237ENST00000585163 ERICH6BQ5W0A0 696 aa19.55■□□□□ 0.72
CDK5RAP3-237ENST00000585163 MRS2Q9HD23 443 aa19.54■□□□□ 0.72
CDK5RAP3-237ENST00000585163 KIAA1107Q9UPP5 1409 aa19.54■□□□□ 0.72
CDK5RAP3-237ENST00000585163 SYNJ2O15056 1496 aa19.52■□□□□ 0.72
CDK5RAP3-237ENST00000585163 ZBED9Q6R2W3 1325 aa19.51■□□□□ 0.71
CDK5RAP3-237ENST00000585163 FAM9BQ8IZU0 186 aa19.51■□□□□ 0.71
CDK5RAP3-237ENST00000585163 IRX6P78412 446 aaPredicted RBP19.51■□□□□ 0.71
CDK5RAP3-237ENST00000585163 CHMP7Q8WUX9 453 aaPredicted RBP19.51■□□□□ 0.71
CDK5RAP3-237ENST00000585163 ANKRD30AQ9BXX3 1397 aa19.5■□□□□ 0.71
CDK5RAP3-237ENST00000585163 CARMIL2Q6F5E8 1435 aa19.49■□□□□ 0.71
CDK5RAP3-237ENST00000585163 ZNF777Q9ULD5 760 aaPredicted RBP19.48■□□□□ 0.71
CDK5RAP3-237ENST00000585163 NUP160Q12769 1436 aa19.46■□□□□ 0.71
CDK5RAP3-237ENST00000585163 ANKRD50Q9ULJ7 1429 aa19.46■□□□□ 0.71
CDK5RAP3-237ENST00000585163 PKD2Q13563 968 aa19.46■□□□□ 0.71
CDK5RAP3-237ENST00000585163 USP47Q96K76 1375 aa19.45■□□□□ 0.7
CDK5RAP3-237ENST00000585163 DHX29Q7Z478 1369 aaKnown RBP19.45■□□□□ 0.7
CDK5RAP3-237ENST00000585163 JPH4Q96JJ6 628 aa19.45■□□□□ 0.7
CDK5RAP3-237ENST00000585163 BCORL1Q5H9F3 1711 aa19.44■□□□□ 0.7
CDK5RAP3-237ENST00000585163 PPP4R2Q9NY27 417 aa19.44■□□□□ 0.7
CDK5RAP3-237ENST00000585163 CDC42BPAQ5VT25 1732 aa19.43■□□□□ 0.7
CDK5RAP3-237ENST00000585163 SHANK2Q9UPX8 1470 aa19.43■□□□□ 0.7
CDK5RAP3-237ENST00000585163 ARID4BQ4LE39 1312 aaPredicted RBP19.43■□□□□ 0.7
CDK5RAP3-237ENST00000585163 KDM5CP41229 1560 aa19.43■□□□□ 0.7
CDK5RAP3-237ENST00000585163 ABCC10Q5T3U5 1492 aa19.42■□□□□ 0.7
CDK5RAP3-237ENST00000585163 ERCC6Q03468 1493 aa19.41■□□□□ 0.7
CDK5RAP3-237ENST00000585163 UHRF1BP1Q6BDS2 1440 aa19.41■□□□□ 0.7
CDK5RAP3-237ENST00000585163 ABCA8O94911 1581 aa19.41■□□□□ 0.7
CDK5RAP3-237ENST00000585163 PLEKHD1A6NEE1 506 aa19.4■□□□□ 0.7
CDK5RAP3-237ENST00000585163 FBLN2P98095 1184 aa19.4■□□□□ 0.7
CDK5RAP3-237ENST00000585163 C9orf84Q5VXU9 1444 aa19.39■□□□□ 0.69
CDK5RAP3-237ENST00000585163 ZNF326Q5BKZ1 582 aaKnown RBP19.39■□□□□ 0.69
CDK5RAP3-237ENST00000585163 KDM5DQ9BY66 1539 aa19.38■□□□□ 0.69
CDK5RAP3-237ENST00000585163 ATP10BO94823 1461 aa19.38■□□□□ 0.69
CDK5RAP3-237ENST00000585163 RALGAPBQ86X10 1494 aa19.38■□□□□ 0.69
CDK5RAP3-237ENST00000585163 NUP155O75694 1391 aa19.38■□□□□ 0.69
CDK5RAP3-237ENST00000585163 ARHGEF12Q9NZN5 1544 aa19.37■□□□□ 0.69
CDK5RAP3-237ENST00000585163 FANCIQ9NVI1 1328 aa19.36■□□□□ 0.69
CDK5RAP3-237ENST00000585163 ROCK2O75116 1388 aaKnown RBP19.35■□□□□ 0.69
CDK5RAP3-237ENST00000585163 SMG6Q86US8 1419 aaKnown RBP19.33■□□□□ 0.69
CDK5RAP3-237ENST00000585163 PTPRGP23470 1445 aa19.33■□□□□ 0.68
CDK5RAP3-237ENST00000585163 TSPY4P0CV99 314 aa19.32■□□□□ 0.68
CDK5RAP3-237ENST00000585163 TSPY10P0CW01 314 aa19.32■□□□□ 0.68
CDK5RAP3-237ENST00000585163 ARHGEF5Q12774 1597 aa19.32■□□□□ 0.68
CDK5RAP3-237ENST00000585163 MSH5O43196 834 aa19.31■□□□□ 0.68
CDK5RAP3-237ENST00000585163 POLR3GLQ9BT43 218 aa19.31■□□□□ 0.68
CDK5RAP3-237ENST00000585163 CARD11Q9BXL7 1154 aa19.3■□□□□ 0.68
CDK5RAP3-237ENST00000585163 KIF15Q9NS87 1388 aa19.3■□□□□ 0.68
CDK5RAP3-237ENST00000585163 B4GALNT3Q6L9W6 998 aa19.28■□□□□ 0.68
CDK5RAP3-237ENST00000585163 PNISRQ8TF01 805 aaKnown RBP19.26■□□□□ 0.67
CDK5RAP3-237ENST00000585163 NUDCQ9Y266 331 aa19.26■□□□□ 0.67
CDK5RAP3-237ENST00000585163 HNRNPMP52272 730 aaKnown RBP eCLIP19.26■□□□□ 0.674e-8■■□□□ 12.7
CDK5RAP3-237ENST00000585163 RNF123Q5XPI4 1314 aa19.25■□□□□ 0.67
CDK5RAP3-237ENST00000585163 CNGB1Q14028 1251 aaPredicted RBP19.25■□□□□ 0.67
CDK5RAP3-237ENST00000585163 ST20-MTHFSA0A0A6YYL1 179 aa19.23■□□□□ 0.67
CDK5RAP3-237ENST00000585163 CCDC141Q6ZP82 1450 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms