RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 TROQ12816 1431 aaPredicted RBP24.61■■□□□ 1.53
VAPA-209ENST00000585042 YEATS2Q9ULM3 1422 aa24.6■■□□□ 1.53
VAPA-209ENST00000585042 CLIP1P30622 1438 aa24.59■■□□□ 1.53
VAPA-209ENST00000585042 MYO5CQ9NQX4 1742 aa24.58■■□□□ 1.53
VAPA-209ENST00000585042 KIF14Q15058 1648 aa24.56■■□□□ 1.52
VAPA-209ENST00000585042 ATP10AO60312 1499 aa24.54■■□□□ 1.52
VAPA-209ENST00000585042 PCF11O94913 1555 aaKnown RBP24.53■■□□□ 1.52
VAPA-209ENST00000585042 RIMS1Q86UR5 1692 aaKnown RBP24.53■■□□□ 1.52
VAPA-209ENST00000585042 CASKIN1Q8WXD9 1431 aa24.52■■□□□ 1.52
VAPA-209ENST00000585042 ZNF518AQ6AHZ1 1483 aa24.51■■□□□ 1.51
VAPA-209ENST00000585042 CCDC18Q5T9S5 1454 aa24.5■■□□□ 1.51
VAPA-209ENST00000585042 LMTK3Q96Q04 1460 aa24.5■■□□□ 1.51
VAPA-209ENST00000585042 ARHGAP5Q13017 1502 aa24.49■■□□□ 1.51
VAPA-209ENST00000585042 C9orf84Q5VXU9 1444 aa24.48■■□□□ 1.51
VAPA-209ENST00000585042 LRRIQ1Q96JM4 1722 aa24.48■■□□□ 1.51
VAPA-209ENST00000585042 SIGLEC1Q9BZZ2 1709 aa24.47■■□□□ 1.51
VAPA-209ENST00000585042 AFAP1Q8N556 730 aa24.46■■□□□ 1.51
VAPA-209ENST00000585042 MLECQ14165 292 aa24.45■■□□□ 1.5
VAPA-209ENST00000585042 KDM5CP41229 1560 aa24.44■■□□□ 1.5
VAPA-209ENST00000585042 ARHGEF12Q9NZN5 1544 aa24.43■■□□□ 1.5
VAPA-209ENST00000585042 FBXO41Q8TF61 875 aa24.42■■□□□ 1.5
VAPA-209ENST00000585042 CDC42BPBQ9Y5S2 1711 aa24.41■■□□□ 1.5
VAPA-209ENST00000585042 FYCO1Q9BQS8 1478 aa24.4■■□□□ 1.5
VAPA-209ENST00000585042 MLH3Q9UHC1 1453 aa24.4■■□□□ 1.5
VAPA-209ENST00000585042 FER1L4A9Z1Z3 1794 aa24.4■■□□□ 1.5
VAPA-209ENST00000585042 MYT1LQ9UL68 1186 aa24.38■■□□□ 1.49
VAPA-209ENST00000585042 PREX2Q70Z35 1606 aa24.37■■□□□ 1.49
VAPA-209ENST00000585042 REREQ9P2R6 1566 aa24.37■■□□□ 1.49
VAPA-209ENST00000585042 PLPPR3Q6T4P5 718 aa24.35■■□□□ 1.49
VAPA-209ENST00000585042 HSPA2P54652 639 aa24.34■■□□□ 1.49
VAPA-209ENST00000585042 ABCC1P33527 1531 aa24.32■■□□□ 1.48
VAPA-209ENST00000585042 TRAPPC8Q9Y2L5 1435 aa24.32■■□□□ 1.48
VAPA-209ENST00000585042 DIP2CQ9Y2E4 1556 aa24.32■■□□□ 1.48
VAPA-209ENST00000585042 AGLP35573 1532 aa24.3■■□□□ 1.48
VAPA-209ENST00000585042 CDC42BPAQ5VT25 1732 aa24.29■■□□□ 1.48
VAPA-209ENST00000585042 ITSN2Q9NZM3 1697 aa24.27■■□□□ 1.48
VAPA-209ENST00000585042 SETD1BQ9UPS6 1966 aaKnown RBP24.27■■□□□ 1.48
VAPA-209ENST00000585042 CEBPAP49715 358 aaPredicted RBP24.27■■□□□ 1.48
VAPA-209ENST00000585042 ABCA6Q8N139 1617 aa24.25■■□□□ 1.47
VAPA-209ENST00000585042 PREX1Q8TCU6 1659 aa24.25■■□□□ 1.47
VAPA-209ENST00000585042 GPATCH8Q9UKJ3 1502 aaKnown RBP24.25■■□□□ 1.47
VAPA-209ENST00000585042 ESF1Q9H501 851 aaKnown RBP24.24■■□□□ 1.47
VAPA-209ENST00000585042 KIDINS220Q9ULH0 1771 aa24.22■■□□□ 1.47
VAPA-209ENST00000585042 KIAA1107Q9UPP5 1409 aa24.22■■□□□ 1.47
VAPA-209ENST00000585042 ZNF777Q9ULD5 760 aaPredicted RBP24.22■■□□□ 1.47
VAPA-209ENST00000585042 DMRT2Q9Y5R5 561 aa24.22■■□□□ 1.47
VAPA-209ENST00000585042 PLEKHH2Q8IVE3 1493 aa24.2■■□□□ 1.47
VAPA-209ENST00000585042 CFDP1Q9UEE9 299 aaPredicted RBP24.2■■□□□ 1.46
VAPA-209ENST00000585042 UHRF1BP1Q6BDS2 1440 aa24.19■■□□□ 1.46
VAPA-209ENST00000585042 SAMD9LQ8IVG5 1584 aa24.19■■□□□ 1.46
VAPA-209ENST00000585042 CNTLNQ9NXG0 1405 aa24.18■■□□□ 1.46
VAPA-209ENST00000585042 CCNB3Q8WWL7 1395 aa24.18■■□□□ 1.46
VAPA-209ENST00000585042 SPAG9O60271 1321 aaKnown RBP24.18■■□□□ 1.46
VAPA-209ENST00000585042 HNRNPMP52272 730 aaKnown RBP eCLIP24.18■■□□□ 1.467e-9■■■■□ 24.6
VAPA-209ENST00000585042 MTUS2Q5JR59 1369 aa24.17■■□□□ 1.46
VAPA-209ENST00000585042 CERKQ8TCT0 537 aa24.15■■□□□ 1.46
VAPA-209ENST00000585042 SYCP2Q9BX26 1530 aa24.14■■□□□ 1.45
VAPA-209ENST00000585042 PHF23Q9BUL5 403 aaPredicted RBP24.13■■□□□ 1.45
VAPA-209ENST00000585042 C3P01024 1663 aa24.13■■□□□ 1.45
VAPA-209ENST00000585042 PPP6R1Q9UPN7 881 aa24.08■■□□□ 1.45
VAPA-209ENST00000585042 ATP7AQ04656 1500 aa24.08■■□□□ 1.45
VAPA-209ENST00000585042 STRCQ7RTU9 1775 aa24.08■■□□□ 1.44
VAPA-209ENST00000585042 NPATQ14207 1427 aa24.07■■□□□ 1.44
VAPA-209ENST00000585042 MROH2AA6NES4 1674 aa24.05■■□□□ 1.44
VAPA-209ENST00000585042 EHBP1L1Q8N3D4 1523 aa24.05■■□□□ 1.44
VAPA-209ENST00000585042 ZMYM3Q14202 1370 aa24.05■■□□□ 1.44
VAPA-209ENST00000585042 PTPRTO14522 1441 aa24.05■■□□□ 1.44
VAPA-209ENST00000585042 CEP162Q5TB80 1403 aa24.05■■□□□ 1.44
VAPA-209ENST00000585042 A2MP01023 1474 aa24.05■■□□□ 1.44
VAPA-209ENST00000585042 INO80Q9ULG1 1556 aaPredicted RBP24.04■■□□□ 1.44
VAPA-209ENST00000585042 PLXNC1O60486 1568 aa24.03■■□□□ 1.44
VAPA-209ENST00000585042 RTEL1-TNFRSF6BF6WH68 1400 aa24.01■■□□□ 1.43
VAPA-209ENST00000585042 SUPT6HQ7KZ85 1726 aaKnown RBP24.01■■□□□ 1.43
VAPA-209ENST00000585042 TIAM1Q13009 1591 aa24.01■■□□□ 1.43
VAPA-209ENST00000585042 RSPH4AQ5TD94 716 aa24.01■■□□□ 1.43
VAPA-209ENST00000585042 MBD5Q9P267 1494 aa24■■□□□ 1.43
VAPA-209ENST00000585042 ZNF644Q9H582 1327 aaPredicted RBP24■■□□□ 1.43
VAPA-209ENST00000585042 GGT6Q6P531 493 aa23.97■■□□□ 1.43
VAPA-209ENST00000585042 ADGBQ8N7X0 1667 aa23.97■■□□□ 1.43
VAPA-209ENST00000585042 NCOA1Q15788 1441 aa23.94■■□□□ 1.42
VAPA-209ENST00000585042 DHX29Q7Z478 1369 aaKnown RBP23.94■■□□□ 1.42
VAPA-209ENST00000585042 CLTCQ00610 1675 aaKnown RBP23.92■■□□□ 1.42
VAPA-209ENST00000585042 NCOA2Q15596 1464 aa23.91■■□□□ 1.42
VAPA-209ENST00000585042 PTPRKQ15262 1439 aa23.91■■□□□ 1.42
VAPA-209ENST00000585042 CAMSAP1Q5T5Y3 1602 aa23.88■■□□□ 1.41
VAPA-209ENST00000585042 CCDC141Q6ZP82 1450 aa23.87■■□□□ 1.41
VAPA-209ENST00000585042 PKD2Q13563 968 aa23.87■■□□□ 1.41
VAPA-209ENST00000585042 CAMSAP2Q08AD1 1489 aa23.85■■□□□ 1.41
VAPA-209ENST00000585042 PLA2R1Q13018 1463 aa23.84■■□□□ 1.41
VAPA-209ENST00000585042 IQSEC2Q5JU85 1478 aa23.84■■□□□ 1.41
VAPA-209ENST00000585042 TSPY4P0CV99 314 aa23.84■■□□□ 1.41
VAPA-209ENST00000585042 TSPY10P0CW01 314 aa23.84■■□□□ 1.41
VAPA-209ENST00000585042 FAM135AQ9P2D6 1515 aa23.84■■□□□ 1.41
VAPA-209ENST00000585042 VPS8Q8N3P4 1428 aa23.84■■□□□ 1.41
VAPA-209ENST00000585042 ZNF142P52746 1687 aaPredicted RBP23.83■■□□□ 1.41
VAPA-209ENST00000585042 KIF3BO15066 747 aa23.83■■□□□ 1.41
VAPA-209ENST00000585042 LTBP4Q8N2S1 1624 aa23.83■■□□□ 1.41
VAPA-209ENST00000585042 ARHGEF5Q12774 1597 aa23.81■■□□□ 1.4
VAPA-209ENST00000585042 NCKAP5LQ9HCH0 1330 aa23.81■■□□□ 1.4
VAPA-209ENST00000585042 LRRC9Q6ZRR7 1453 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms