RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 ARAP3Q8WWN8 1544 aa20.97■□□□□ 0.95
UBBP4-202ENST00000584755 ABCA9Q8IUA7 1624 aa20.97■□□□□ 0.95
UBBP4-202ENST00000584755 HRCP23327 699 aa20.97■□□□□ 0.95
UBBP4-202ENST00000584755 DAPK1P53355 1430 aa20.97■□□□□ 0.95
UBBP4-202ENST00000584755 CYB5RLQ6IPT4 315 aa20.96■□□□□ 0.95
UBBP4-202ENST00000584755 KCNH8Q96L42 1107 aa20.96■□□□□ 0.95
UBBP4-202ENST00000584755 ABCC5O15440 1437 aa20.96■□□□□ 0.95
UBBP4-202ENST00000584755 PLCH2O75038 1416 aa20.96■□□□□ 0.95
UBBP4-202ENST00000584755 AKNAQ7Z591 1439 aa20.96■□□□□ 0.95
UBBP4-202ENST00000584755 SETD5Q9C0A6 1442 aa20.96■□□□□ 0.95
UBBP4-202ENST00000584755 MAPKBP1O60336 1514 aa20.95■□□□□ 0.94
UBBP4-202ENST00000584755 HFM1A2PYH4 1435 aa20.94■□□□□ 0.94
UBBP4-202ENST00000584755 SAMD9LQ8IVG5 1584 aa20.94■□□□□ 0.94
UBBP4-202ENST00000584755 ARHGEF5Q12774 1597 aa20.92■□□□□ 0.94
UBBP4-202ENST00000584755 ARHGAP5Q13017 1502 aa20.92■□□□□ 0.94
UBBP4-202ENST00000584755 CROCC2H7BZ55 1655 aa20.92■□□□□ 0.94
UBBP4-202ENST00000584755 RAB3GAP2Q9H2M9 1393 aa20.91■□□□□ 0.94
UBBP4-202ENST00000584755 ROCK1Q13464 1354 aa20.9■□□□□ 0.94
UBBP4-202ENST00000584755 MBD5Q9P267 1494 aa20.9■□□□□ 0.94
UBBP4-202ENST00000584755 ZNF777Q9ULD5 760 aaPredicted RBP20.89■□□□□ 0.94
UBBP4-202ENST00000584755 PLEKHH2Q8IVE3 1493 aa20.89■□□□□ 0.93
UBBP4-202ENST00000584755 NAIPQ13075 1403 aa20.89■□□□□ 0.93
UBBP4-202ENST00000584755 GCC2Q8IWJ2 1684 aa20.88■□□□□ 0.93
UBBP4-202ENST00000584755 SHANK2Q9UPX8 1470 aa20.88■□□□□ 0.93
UBBP4-202ENST00000584755 KIAA1107Q9UPP5 1409 aa20.88■□□□□ 0.93
UBBP4-202ENST00000584755 CCER1Q8TC90 406 aaPredicted RBP20.87■□□□□ 0.93
UBBP4-202ENST00000584755 ADGRL2O95490 1459 aa20.86■□□□□ 0.93
UBBP4-202ENST00000584755 ADGBQ8N7X0 1667 aa20.84■□□□□ 0.93
UBBP4-202ENST00000584755 RSPH4AQ5TD94 716 aa20.84■□□□□ 0.93
UBBP4-202ENST00000584755 EFCAB2Q5VUJ9 269 aa20.84■□□□□ 0.93
UBBP4-202ENST00000584755 ZEB1P37275 1124 aaPredicted RBP20.83■□□□□ 0.93
UBBP4-202ENST00000584755 ABCC1P33527 1531 aa20.83■□□□□ 0.92
UBBP4-202ENST00000584755 SYCP2Q9BX26 1530 aa20.83■□□□□ 0.92
UBBP4-202ENST00000584755 CCDC141Q6ZP82 1450 aa20.82■□□□□ 0.92
UBBP4-202ENST00000584755 DHX57Q6P158 1386 aaKnown RBP20.82■□□□□ 0.92
UBBP4-202ENST00000584755 CHIC2Q9UKJ5 165 aa20.81■□□□□ 0.92
UBBP4-202ENST00000584755 ARHGEF12Q9NZN5 1544 aa20.8■□□□□ 0.92
UBBP4-202ENST00000584755 HNRNPMP52272 730 aaKnown RBP eCLIP20.8■□□□□ 0.92
UBBP4-202ENST00000584755 NCOA1Q15788 1441 aa20.8■□□□□ 0.92
UBBP4-202ENST00000584755 GLI2P10070 1586 aa20.8■□□□□ 0.92
UBBP4-202ENST00000584755 MAST1Q9Y2H9 1570 aa20.8■□□□□ 0.92
UBBP4-202ENST00000584755 C9orf84Q5VXU9 1444 aa20.79■□□□□ 0.92
UBBP4-202ENST00000584755 FANCAO15360 1455 aa20.79■□□□□ 0.92
UBBP4-202ENST00000584755 RRP7BPQ9NSQ0 103 aa20.77■□□□□ 0.92
UBBP4-202ENST00000584755 CLSPNQ9HAW4 1339 aa20.77■□□□□ 0.92
UBBP4-202ENST00000584755 CD109Q6YHK3 1445 aa20.77■□□□□ 0.91
UBBP4-202ENST00000584755 ANKRD30AQ9BXX3 1397 aa20.76■□□□□ 0.91
UBBP4-202ENST00000584755 CFAP74Q9C0B2 1584 aa20.74■□□□□ 0.91
UBBP4-202ENST00000584755 MAP3K4Q9Y6R4 1608 aa20.74■□□□□ 0.91
UBBP4-202ENST00000584755 TSPY4P0CV99 314 aa20.74■□□□□ 0.91
UBBP4-202ENST00000584755 TSPY10P0CW01 314 aa20.74■□□□□ 0.91
UBBP4-202ENST00000584755 KDM6BO15054 1643 aa20.73■□□□□ 0.91
UBBP4-202ENST00000584755 ACIN1Q9UKV3 1341 aaKnown RBP20.73■□□□□ 0.91
UBBP4-202ENST00000584755 DIP2BQ9P265 1576 aa20.73■□□□□ 0.91
UBBP4-202ENST00000584755 TRAPPC8Q9Y2L5 1435 aa20.7■□□□□ 0.9
UBBP4-202ENST00000584755 PLXNC1O60486 1568 aa20.69■□□□□ 0.9
UBBP4-202ENST00000584755 ADGRL1O94910 1474 aa20.69■□□□□ 0.9
UBBP4-202ENST00000584755 NEO1Q92859 1461 aa20.68■□□□□ 0.9
UBBP4-202ENST00000584755 RTEL1-TNFRSF6BF6WH68 1400 aa20.66■□□□□ 0.9
UBBP4-202ENST00000584755 SCAPERQ9BY12 1400 aa20.66■□□□□ 0.9
UBBP4-202ENST00000584755 KIF15Q9NS87 1388 aa20.66■□□□□ 0.9
UBBP4-202ENST00000584755 ANKRD50Q9ULJ7 1429 aa20.64■□□□□ 0.9
UBBP4-202ENST00000584755 ZFYVE16Q7Z3T8 1539 aa20.63■□□□□ 0.89
UBBP4-202ENST00000584755 INO80Q9ULG1 1556 aaPredicted RBP20.61■□□□□ 0.89
UBBP4-202ENST00000584755 FAM69CQ0P6D2 419 aa20.6■□□□□ 0.89
UBBP4-202ENST00000584755 ZNF518AQ6AHZ1 1483 aa20.59■□□□□ 0.89
UBBP4-202ENST00000584755 AFAP1Q8N556 730 aa20.59■□□□□ 0.89
UBBP4-202ENST00000584755 DUOX2Q9NRD8 1548 aa20.59■□□□□ 0.89
UBBP4-202ENST00000584755 POGZQ7Z3K3 1410 aa20.59■□□□□ 0.89
UBBP4-202ENST00000584755 KDM5CP41229 1560 aa20.59■□□□□ 0.89
UBBP4-202ENST00000584755 PPRC1Q5VV67 1664 aaKnown RBP20.58■□□□□ 0.89
UBBP4-202ENST00000584755 KIF13AQ9H1H9 1805 aa20.58■□□□□ 0.89
UBBP4-202ENST00000584755 SPAG9O60271 1321 aaKnown RBP20.58■□□□□ 0.88
UBBP4-202ENST00000584755 ATP7AQ04656 1500 aa20.58■□□□□ 0.88
UBBP4-202ENST00000584755 DENND4BO75064 1496 aaPredicted RBP20.57■□□□□ 0.88
UBBP4-202ENST00000584755 KDM5DQ9BY66 1539 aa20.56■□□□□ 0.88
UBBP4-202ENST00000584755 ERBINQ96RT1 1412 aa20.55■□□□□ 0.88
UBBP4-202ENST00000584755 DNAJC5Q9H3Z4 198 aa20.54■□□□□ 0.88
UBBP4-202ENST00000584755 PZPP20742 1482 aa20.53■□□□□ 0.88
UBBP4-202ENST00000584755 TEX14Q8IWB6 1497 aa20.53■□□□□ 0.88
UBBP4-202ENST00000584755 TRIM52Q96A61 297 aa20.53■□□□□ 0.88
UBBP4-202ENST00000584755 KIDINS220Q9ULH0 1771 aa20.53■□□□□ 0.88
UBBP4-202ENST00000584755 MLH3Q9UHC1 1453 aa20.53■□□□□ 0.88
UBBP4-202ENST00000584755 UNC13BO14795 1591 aa20.52■□□□□ 0.87
UBBP4-202ENST00000584755 MPHOSPH9Q99550 1183 aa20.51■□□□□ 0.87
UBBP4-202ENST00000584755 RICTORQ6R327 1708 aa20.5■□□□□ 0.87
UBBP4-202ENST00000584755 HECW2Q9P2P5 1572 aa20.5■□□□□ 0.87
UBBP4-202ENST00000584755 MAGI2Q86UL8 1455 aa20.49■□□□□ 0.87
UBBP4-202ENST00000584755 TSPOAP1O95153 1857 aa20.47■□□□□ 0.87
UBBP4-202ENST00000584755 FRMPD1Q5SYB0 1578 aa20.46■□□□□ 0.87
UBBP4-202ENST00000584755 EIF2AK4Q9P2K8 1649 aaKnown RBP20.45■□□□□ 0.86
UBBP4-202ENST00000584755 NUP155O75694 1391 aa20.45■□□□□ 0.86
UBBP4-202ENST00000584755 DHX29Q7Z478 1369 aaKnown RBP20.44■□□□□ 0.86
UBBP4-202ENST00000584755 ZMYM4Q5VZL5 1548 aa20.44■□□□□ 0.86
UBBP4-202ENST00000584755 SLC4A1APQ9BWU0 796 aaKnown RBP20.43■□□□□ 0.86
UBBP4-202ENST00000584755 DEPDC5O75140 1603 aa20.42■□□□□ 0.86
UBBP4-202ENST00000584755 IQGAP3Q86VI3 1631 aa20.42■□□□□ 0.86
UBBP4-202ENST00000584755 FAM135AQ9P2D6 1515 aa20.41■□□□□ 0.86
UBBP4-202ENST00000584755 RAPGEF3O95398 923 aa20.41■□□□□ 0.86
UBBP4-202ENST00000584755 TIMELESSQ9UNS1 1208 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms