RNA–Protein interactions for RNA: ENST00000584450.5

ERBB2-218, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 3,730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-218ENST00000584450 NBPF8Q3BBV2 869 aa15.94■□□□□ 0.14
ERBB2-218ENST00000584450 ANKRD30AQ9BXX3 1397 aa15.94■□□□□ 0.14
ERBB2-218ENST00000584450 FYCO1Q9BQS8 1478 aa15.93■□□□□ 0.14
ERBB2-218ENST00000584450 NEUROD2Q15784 382 aa15.93■□□□□ 0.14
ERBB2-218ENST00000584450 BIVM-ERCC5R4GMW8 1640 aa15.93■□□□□ 0.14
ERBB2-218ENST00000584450 PCF11O94913 1555 aaKnown RBP15.92■□□□□ 0.14
ERBB2-218ENST00000584450 KNSTRNQ9Y448 316 aa15.92■□□□□ 0.14
ERBB2-218ENST00000584450 ANP32EQ9BTT0 268 aa15.91■□□□□ 0.14
ERBB2-218ENST00000584450 STAG3Q9UJ98 1225 aa15.9■□□□□ 0.14
ERBB2-218ENST00000584450 ABCA10Q8WWZ4 1543 aa15.88■□□□□ 0.13
ERBB2-218ENST00000584450 ROCK2O75116 1388 aaKnown RBP15.88■□□□□ 0.13
ERBB2-218ENST00000584450 KIF7Q2M1P5 1343 aa15.88■□□□□ 0.13
ERBB2-218ENST00000584450 DNMBPQ6XZF7 1577 aa15.87■□□□□ 0.13
ERBB2-218ENST00000584450 C11orf95C9JLR9 678 aaPredicted RBP15.87■□□□□ 0.13
ERBB2-218ENST00000584450 NAIPQ13075 1403 aa15.87■□□□□ 0.13
ERBB2-218ENST00000584450 CDK13Q14004 1512 aaKnown RBP15.87■□□□□ 0.13
ERBB2-218ENST00000584450 PRG4Q92954 1404 aaPredicted RBP15.86■□□□□ 0.13
ERBB2-218ENST00000584450 URB2Q14146 1524 aaKnown RBP15.85■□□□□ 0.13
ERBB2-218ENST00000584450 SAFB2Q14151 953 aaKnown RBP eCLIP15.85■□□□□ 0.13
ERBB2-218ENST00000584450 HFM1A2PYH4 1435 aa15.85■□□□□ 0.13
ERBB2-218ENST00000584450 PRDM2Q13029 1718 aa15.84■□□□□ 0.13
ERBB2-218ENST00000584450 GGT6Q6P531 493 aa15.84■□□□□ 0.13
ERBB2-218ENST00000584450 ZBTB47Q9UFB7 747 aaPredicted RBP15.84■□□□□ 0.13
ERBB2-218ENST00000584450 PTPRKQ15262 1439 aa15.84■□□□□ 0.13
ERBB2-218ENST00000584450 USP47Q96K76 1375 aa15.83■□□□□ 0.13
ERBB2-218ENST00000584450 TMF1P82094 1093 aa15.83■□□□□ 0.12
ERBB2-218ENST00000584450 PTPRGP23470 1445 aa15.82■□□□□ 0.12
ERBB2-218ENST00000584450 CCDC7Q96M83 1385 aa15.82■□□□□ 0.12
ERBB2-218ENST00000584450 KIF3BO15066 747 aa15.81■□□□□ 0.12
ERBB2-218ENST00000584450 GRIN2BQ13224 1484 aa15.81■□□□□ 0.12
ERBB2-218ENST00000584450 NUTM2DQ5VT03 806 aaPredicted RBP15.81■□□□□ 0.12
ERBB2-218ENST00000584450 EFCAB2Q5VUJ9 269 aa15.8■□□□□ 0.12
ERBB2-218ENST00000584450 EFCAB5A4FU69 1503 aa15.79■□□□□ 0.12
ERBB2-218ENST00000584450 SLC24A1O60721 1099 aa15.79■□□□□ 0.12
ERBB2-218ENST00000584450 MAPKBP1O60336 1514 aa15.78■□□□□ 0.12
ERBB2-218ENST00000584450 PPM1GO15355 546 aaPredicted RBP15.76■□□□□ 0.11
ERBB2-218ENST00000584450 PANK3Q9H999 370 aa15.76■□□□□ 0.11
ERBB2-218ENST00000584450 RGS3P49796 1198 aa15.76■□□□□ 0.11
ERBB2-218ENST00000584450 NBPF1Q3BBV0 1214 aa15.76■□□□□ 0.11
ERBB2-218ENST00000584450 ZNF608Q9ULD9 1512 aaPredicted RBP15.75■□□□□ 0.11
ERBB2-218ENST00000584450 PLIN1O60240 522 aa15.75■□□□□ 0.11
ERBB2-218ENST00000584450 NUDCQ9Y266 331 aa15.75■□□□□ 0.11
ERBB2-218ENST00000584450 ANKRD50Q9ULJ7 1429 aa15.75■□□□□ 0.11
ERBB2-218ENST00000584450 EPRSP07814 1512 aaKnown RBP15.75■□□□□ 0.11
ERBB2-218ENST00000584450 KIF15Q9NS87 1388 aa15.74■□□□□ 0.11
ERBB2-218ENST00000584450 KTN1Q86UP2 1357 aaKnown RBP15.74■□□□□ 0.11
ERBB2-218ENST00000584450 SNAPC4Q5SXM2 1469 aa15.73■□□□□ 0.11
ERBB2-218ENST00000584450 RCAN3Q9UKA8 241 aa15.73■□□□□ 0.11
ERBB2-218ENST00000584450 CCDC146Q8IYE0 955 aa15.73■□□□□ 0.11
ERBB2-218ENST00000584450 FRAT1Q92837 279 aaPredicted RBP15.73■□□□□ 0.11
ERBB2-218ENST00000584450 ESF1Q9H501 851 aaKnown RBP15.72■□□□□ 0.11
ERBB2-218ENST00000584450 SPAG9O60271 1321 aaKnown RBP15.72■□□□□ 0.11
ERBB2-218ENST00000584450 STK26Q9P289 416 aa15.72■□□□□ 0.11
ERBB2-218ENST00000584450 NEFMP07197 916 aa15.72■□□□□ 0.11
ERBB2-218ENST00000584450 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.72■□□□□ 0.11
ERBB2-218ENST00000584450 AFAP1Q8N556 730 aa15.71■□□□□ 0.11
ERBB2-218ENST00000584450 LAS1LQ9Y4W2 734 aaKnown RBP15.71■□□□□ 0.11
ERBB2-218ENST00000584450 CDCA8Q53HL2 280 aa15.71■□□□□ 0.11
ERBB2-218ENST00000584450 CCDC144AA2RUR9 1427 aa15.7■□□□□ 0.1
ERBB2-218ENST00000584450 PLB1Q6P1J6 1458 aa15.7■□□□□ 0.1
ERBB2-218ENST00000584450 RALBP1Q15311 655 aa15.7■□□□□ 0.1
ERBB2-218ENST00000584450 NLRP13Q86W25 1043 aa15.7■□□□□ 0.1
ERBB2-218ENST00000584450 MRC2Q9UBG0 1479 aa15.7■□□□□ 0.1
ERBB2-218ENST00000584450 CNTLNQ9NXG0 1405 aa15.7■□□□□ 0.1
ERBB2-218ENST00000584450 ZBED9Q6R2W3 1325 aa15.69■□□□□ 0.1
ERBB2-218ENST00000584450 PLEKHG5O94827 1062 aa15.69■□□□□ 0.1
ERBB2-218ENST00000584450 MLECQ14165 292 aa15.69■□□□□ 0.1
ERBB2-218ENST00000584450 EHBP1L1Q8N3D4 1523 aa15.69■□□□□ 0.1
ERBB2-218ENST00000584450 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.69■□□□□ 0.1
ERBB2-218ENST00000584450 MAP3K1Q13233 1512 aa15.68■□□□□ 0.1
ERBB2-218ENST00000584450 DAPK1P53355 1430 aa15.68■□□□□ 0.1
ERBB2-218ENST00000584450 EXOC6Q8TAG9 804 aa15.66■□□□□ 0.1
ERBB2-218ENST00000584450 TRAK1Q9UPV9 953 aa15.66■□□□□ 0.1
ERBB2-218ENST00000584450 RSPH4AQ5TD94 716 aa15.66■□□□□ 0.1
ERBB2-218ENST00000584450 U2SURPO15042 1029 aaKnown RBP15.65■□□□□ 0.1
ERBB2-218ENST00000584450 ARXQ96QS3 562 aa15.65■□□□□ 0.1
ERBB2-218ENST00000584450 MIA2Q96PC5 1412 aa15.65■□□□□ 0.1
ERBB2-218ENST00000584450 MYBBP1AQ9BQG0 1328 aaKnown RBP15.64■□□□□ 0.09
ERBB2-218ENST00000584450 TROQ12816 1431 aaPredicted RBP15.64■□□□□ 0.09
ERBB2-218ENST00000584450 SUPT6HQ7KZ85 1726 aaKnown RBP15.64■□□□□ 0.09
ERBB2-218ENST00000584450 ABCC5O15440 1437 aa15.64■□□□□ 0.09
ERBB2-218ENST00000584450 LAMC3Q9Y6N6 1575 aa15.64■□□□□ 0.09
ERBB2-218ENST00000584450 NOP58Q9Y2X3 529 aaKnown RBP15.64■□□□□ 0.09
ERBB2-218ENST00000584450 CDCA7LQ96GN5 454 aa15.63■□□□□ 0.09
ERBB2-218ENST00000584450 ANKRD30BQ9BXX2 1392 aa15.63■□□□□ 0.09
ERBB2-218ENST00000584450 PTPN23Q9H3S7 1636 aa15.63■□□□□ 0.09
ERBB2-218ENST00000584450 IQGAP2Q13576 1575 aa15.62■□□□□ 0.09
ERBB2-218ENST00000584450 MORC1Q86VD1 984 aa15.62■□□□□ 0.09
ERBB2-218ENST00000584450 POGKQ9P215 609 aa15.61■□□□□ 0.09
ERBB2-218ENST00000584450 IFT140Q96RY7 1462 aa15.61■□□□□ 0.09
ERBB2-218ENST00000584450 KANK1Q14678 1352 aa15.61■□□□□ 0.09
ERBB2-218ENST00000584450 KIAA0586Q9BVV6 1533 aa15.6■□□□□ 0.09
ERBB2-218ENST00000584450 SRPK2P78362 688 aaKnown RBP15.6■□□□□ 0.09
ERBB2-218ENST00000584450 RRP7AQ9Y3A4 280 aaKnown RBP15.6■□□□□ 0.09
ERBB2-218ENST00000584450 CUL7Q14999 1698 aa15.6■□□□□ 0.09
ERBB2-218ENST00000584450 THOC2Q8NI27 1593 aaKnown RBP15.59■□□□□ 0.09
ERBB2-218ENST00000584450 C9orf84Q5VXU9 1444 aa15.58■□□□□ 0.08
ERBB2-218ENST00000584450 AKNAQ7Z591 1439 aa15.58■□□□□ 0.08
ERBB2-218ENST00000584450 HECW1Q76N89 1606 aa15.58■□□□□ 0.08
ERBB2-218ENST00000584450 KIAA1107Q9UPP5 1409 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms