RNA–Protein interactions for RNA: ENST00000583482.6

SPECC1-221, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

TSL 5

Gene SPECC1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-221ENST00000583482 SETD1BQ9UPS6 1966 aaKnown RBP28.83■■■□□ 2.21
SPECC1-221ENST00000583482 RAPGEF6Q8TEU7 1601 aa28.82■■■□□ 2.2
SPECC1-221ENST00000583482 P3H3Q8IVL6 736 aa28.73■■■□□ 2.19
SPECC1-221ENST00000583482 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.73■■■□□ 2.19
SPECC1-221ENST00000583482 MED1Q15648 1581 aaPredicted RBP28.72■■■□□ 2.19
SPECC1-221ENST00000583482 NUP153P49790 1475 aaKnown RBP28.72■■■□□ 2.19
SPECC1-221ENST00000583482 C9orf84Q5VXU9 1444 aa28.71■■■□□ 2.19
SPECC1-221ENST00000583482 ATP10AO60312 1499 aa28.71■■■□□ 2.19
SPECC1-221ENST00000583482 SAMD9Q5K651 1589 aa28.68■■■□□ 2.18
SPECC1-221ENST00000583482 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.68■■■□□ 2.18
SPECC1-221ENST00000583482 HNRNPUL2Q1KMD3 747 aaKnown RBP28.68■■■□□ 2.18
SPECC1-221ENST00000583482 FAM9AQ8IZU1 332 aaPredicted RBP28.67■■■□□ 2.18
SPECC1-221ENST00000583482 NCOA1Q15788 1441 aa28.67■■■□□ 2.18
SPECC1-221ENST00000583482 C3P01024 1663 aa28.66■■■□□ 2.18
SPECC1-221ENST00000583482 UBAP1LF5GYI3 381 aa28.63■■■□□ 2.17
SPECC1-221ENST00000583482 PRXQ9BXM0 1461 aa28.63■■■□□ 2.17
SPECC1-221ENST00000583482 SCAPERQ9BY12 1400 aa28.6■■■□□ 2.17
SPECC1-221ENST00000583482 ZNF335Q9H4Z2 1342 aaPredicted RBP28.52■■■□□ 2.16
SPECC1-221ENST00000583482 PLEKHD1A6NEE1 506 aa28.52■■■□□ 2.16
SPECC1-221ENST00000583482 TRAPPC8Q9Y2L5 1435 aa28.51■■■□□ 2.15
SPECC1-221ENST00000583482 CAMSAP1Q5T5Y3 1602 aa28.5■■■□□ 2.15
SPECC1-221ENST00000583482 PLCH2O75038 1416 aa28.47■■■□□ 2.15
SPECC1-221ENST00000583482 HSPA1LP34931 641 aa28.46■■■□□ 2.15
SPECC1-221ENST00000583482 REREQ9P2R6 1566 aa28.45■■■□□ 2.15
SPECC1-221ENST00000583482 DIP2CQ9Y2E4 1556 aa28.45■■■□□ 2.15
SPECC1-221ENST00000583482 KDM5CP41229 1560 aa28.44■■■□□ 2.14
SPECC1-221ENST00000583482 ABCA6Q8N139 1617 aa28.38■■■□□ 2.13
SPECC1-221ENST00000583482 ZNF518AQ6AHZ1 1483 aa28.38■■■□□ 2.13
SPECC1-221ENST00000583482 NCKAP5LQ9HCH0 1330 aa28.37■■■□□ 2.13
SPECC1-221ENST00000583482 MYO5CQ9NQX4 1742 aa28.36■■■□□ 2.13
SPECC1-221ENST00000583482 AGLP35573 1532 aa28.36■■■□□ 2.13
SPECC1-221ENST00000583482 PHF23Q9BUL5 403 aaPredicted RBP28.31■■■□□ 2.12
SPECC1-221ENST00000583482 ZNF142P52746 1687 aaPredicted RBP28.29■■■□□ 2.12
SPECC1-221ENST00000583482 CDK13Q14004 1512 aaKnown RBP28.29■■■□□ 2.12
SPECC1-221ENST00000583482 PLA2R1Q13018 1463 aa28.29■■■□□ 2.12
SPECC1-221ENST00000583482 NPATQ14207 1427 aa28.29■■■□□ 2.12
SPECC1-221ENST00000583482 TCOF1Q13428 1488 aaKnown RBP28.28■■■□□ 2.12
SPECC1-221ENST00000583482 AFAP1Q8N556 730 aa28.28■■■□□ 2.12
SPECC1-221ENST00000583482 CNTLNQ9NXG0 1405 aa28.27■■■□□ 2.12
SPECC1-221ENST00000583482 SCAF1Q9H7N4 1312 aaKnown RBP28.27■■■□□ 2.12
SPECC1-221ENST00000583482 MROH2AA6NES4 1674 aa28.27■■■□□ 2.12
SPECC1-221ENST00000583482 PIP4K2BP78356 416 aa28.26■■■□□ 2.11
SPECC1-221ENST00000583482 EFCAB2Q5VUJ9 269 aa28.26■■■□□ 2.11
SPECC1-221ENST00000583482 SUPT6HQ7KZ85 1726 aaKnown RBP28.24■■■□□ 2.11
SPECC1-221ENST00000583482 ESF1Q9H501 851 aaKnown RBP28.24■■■□□ 2.11
SPECC1-221ENST00000583482 MYO3AQ8NEV4 1616 aa28.24■■■□□ 2.11
SPECC1-221ENST00000583482 MLH3Q9UHC1 1453 aa28.22■■■□□ 2.11
SPECC1-221ENST00000583482 PKD2Q13563 968 aa28.22■■■□□ 2.11
SPECC1-221ENST00000583482 ALKQ9UM73 1620 aa28.18■■■□□ 2.1
SPECC1-221ENST00000583482 CEP170BQ9Y4F5 1589 aaPredicted RBP28.18■■■□□ 2.1
SPECC1-221ENST00000583482 KIF14Q15058 1648 aa28.18■■■□□ 2.1
SPECC1-221ENST00000583482 TOM1O60784 492 aa28.17■■■□□ 2.1
SPECC1-221ENST00000583482 ARHGAP5Q13017 1502 aa28.15■■■□□ 2.1
SPECC1-221ENST00000583482 MYT1LQ9UL68 1186 aa28.15■■■□□ 2.1
SPECC1-221ENST00000583482 CPS1P31327 1500 aa28.14■■■□□ 2.1
SPECC1-221ENST00000583482 PPP6R1Q9UPN7 881 aa28.14■■■□□ 2.1
SPECC1-221ENST00000583482 KIDINS220Q9ULH0 1771 aa28.12■■■□□ 2.09
SPECC1-221ENST00000583482 ZMYM3Q14202 1370 aa28.11■■■□□ 2.09
SPECC1-221ENST00000583482 RANGAP1P46060 587 aaPredicted RBP28.11■■■□□ 2.09
SPECC1-221ENST00000583482 RGS17Q9UGC6 210 aaPredicted RBP28.08■■■□□ 2.09
SPECC1-221ENST00000583482 CDC42BPBQ9Y5S2 1711 aa28.06■■■□□ 2.08
SPECC1-221ENST00000583482 CLTCQ00610 1675 aaKnown RBP28.06■■■□□ 2.08
SPECC1-221ENST00000583482 ITSN2Q9NZM3 1697 aa28.06■■■□□ 2.08
SPECC1-221ENST00000583482 ABCC1P33527 1531 aa28.05■■■□□ 2.08
SPECC1-221ENST00000583482 SHANK2Q9UPX8 1470 aa28.04■■■□□ 2.08
SPECC1-221ENST00000583482 NEURL4Q96JN8 1562 aa28.03■■■□□ 2.08
SPECC1-221ENST00000583482 PTPRKQ15262 1439 aa28.03■■■□□ 2.08
SPECC1-221ENST00000583482 POLR1AO95602 1720 aaPredicted RBP28.03■■■□□ 2.08
SPECC1-221ENST00000583482 DNMT1P26358 1616 aaKnown RBP27.99■■■□□ 2.07
SPECC1-221ENST00000583482 VWDEQ8N2E2 1590 aa27.97■■■□□ 2.07
SPECC1-221ENST00000583482 TROQ12816 1431 aaPredicted RBP27.94■■■□□ 2.06
SPECC1-221ENST00000583482 PREX2Q70Z35 1606 aa27.94■■■□□ 2.06
SPECC1-221ENST00000583482 A2ML1A8K2U0 1454 aa27.93■■■□□ 2.06
SPECC1-221ENST00000583482 CSRNP3Q8WYN3 585 aa27.91■■■□□ 2.06
SPECC1-221ENST00000583482 SAMD9LQ8IVG5 1584 aa27.88■■■□□ 2.05
SPECC1-221ENST00000583482 SENP3Q9H4L4 574 aaPredicted RBP27.88■■■□□ 2.05
SPECC1-221ENST00000583482 PLXNC1O60486 1568 aa27.87■■■□□ 2.05
SPECC1-221ENST00000583482 SETD1AO15047 1707 aaKnown RBP27.84■■■□□ 2.05
SPECC1-221ENST00000583482 CDK11AQ9UQ88 783 aaPredicted RBP27.84■■■□□ 2.05
SPECC1-221ENST00000583482 RNF17Q9BXT8 1623 aaKnown RBP27.84■■■□□ 2.05
SPECC1-221ENST00000583482 LRRIQ1Q96JM4 1722 aa27.84■■■□□ 2.05
SPECC1-221ENST00000583482 POTEAQ6S8J7 498 aa27.83■■■□□ 2.05
SPECC1-221ENST00000583482 CLIP1P30622 1438 aa27.83■■■□□ 2.05
SPECC1-221ENST00000583482 STRCP1A6NGW2 1772 aa27.82■■■□□ 2.04
SPECC1-221ENST00000583482 ATP1B4Q9UN42 357 aaPredicted RBP27.77■■■□□ 2.04
SPECC1-221ENST00000583482 CDC42BPAQ5VT25 1732 aa27.77■■■□□ 2.04
SPECC1-221ENST00000583482 LRRC7Q96NW7 1537 aa27.77■■■□□ 2.04
SPECC1-221ENST00000583482 FMN1Q68DA7 1419 aa27.75■■■□□ 2.03
SPECC1-221ENST00000583482 SYNMO15061 1565 aa27.74■■■□□ 2.03
SPECC1-221ENST00000583482 ATP7AQ04656 1500 aa27.73■■■□□ 2.03
SPECC1-221ENST00000583482 MED14O60244 1454 aa27.73■■■□□ 2.03
SPECC1-221ENST00000583482 DEPDC5O75140 1603 aa27.73■■■□□ 2.03
SPECC1-221ENST00000583482 INO80Q9ULG1 1556 aaPredicted RBP27.73■■■□□ 2.03
SPECC1-221ENST00000583482 A2MP01023 1474 aa27.72■■■□□ 2.03
SPECC1-221ENST00000583482 SYCP2Q9BX26 1530 aa27.72■■■□□ 2.03
SPECC1-221ENST00000583482 NPHP4O75161 1426 aaPredicted RBP27.69■■■□□ 2.02
SPECC1-221ENST00000583482 IQGAP1P46940 1657 aa27.68■■■□□ 2.02
SPECC1-221ENST00000583482 SPAG9O60271 1321 aaKnown RBP27.68■■■□□ 2.02
SPECC1-221ENST00000583482 GGT6Q6P531 493 aa27.68■■■□□ 2.02
SPECC1-221ENST00000583482 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms