RNA–Protein interactions for RNA: ENST00000583211.5

LIMD2-211, Transcript of LIM domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMD2, Length 1,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-211ENST00000583211 LRRC9Q6ZRR7 1453 aa28.71■■■□□ 2.19
LIMD2-211ENST00000583211 ITSN2Q9NZM3 1697 aa28.67■■■□□ 2.18
LIMD2-211ENST00000583211 EFCAB2Q5VUJ9 269 aa28.66■■■□□ 2.18
LIMD2-211ENST00000583211 RICTORQ6R327 1708 aa28.66■■■□□ 2.18
LIMD2-211ENST00000583211 GPATCH8Q9UKJ3 1502 aaKnown RBP28.65■■■□□ 2.18
LIMD2-211ENST00000583211 APLP2Q06481 763 aa28.65■■■□□ 2.18
LIMD2-211ENST00000583211 ADGRL1O94910 1474 aa28.64■■■□□ 2.17
LIMD2-211ENST00000583211 CCNB3Q8WWL7 1395 aa28.62■■■□□ 2.17
LIMD2-211ENST00000583211 FRMPD1Q5SYB0 1578 aa28.62■■■□□ 2.17
LIMD2-211ENST00000583211 NCOA2Q15596 1464 aa28.61■■■□□ 2.17
LIMD2-211ENST00000583211 DENND4BO75064 1496 aaPredicted RBP28.6■■■□□ 2.17
LIMD2-211ENST00000583211 ABCC1P33527 1531 aa28.56■■■□□ 2.16
LIMD2-211ENST00000583211 KANK4Q5T7N3 995 aaPredicted RBP28.56■■■□□ 2.16
LIMD2-211ENST00000583211 SCAPERQ9BY12 1400 aa28.56■■■□□ 2.16
LIMD2-211ENST00000583211 SAMD9LQ8IVG5 1584 aa28.54■■■□□ 2.16
LIMD2-211ENST00000583211 RAPGEF3O95398 923 aa28.54■■■□□ 2.16
LIMD2-211ENST00000583211 POGZQ7Z3K3 1410 aa28.53■■■□□ 2.16
LIMD2-211ENST00000583211 ZMYM4Q5VZL5 1548 aa28.53■■■□□ 2.16
LIMD2-211ENST00000583211 CFDP1Q9UEE9 299 aaPredicted RBP28.51■■■□□ 2.15
LIMD2-211ENST00000583211 ZNF518AQ6AHZ1 1483 aa28.49■■■□□ 2.15
LIMD2-211ENST00000583211 PLEKHH2Q8IVE3 1493 aa28.48■■■□□ 2.15
LIMD2-211ENST00000583211 KDM5CP41229 1560 aa28.46■■■□□ 2.15
LIMD2-211ENST00000583211 MAGI2Q86UL8 1455 aa28.45■■■□□ 2.14
LIMD2-211ENST00000583211 KIAA1107Q9UPP5 1409 aa28.44■■■□□ 2.14
LIMD2-211ENST00000583211 ARHGEF12Q9NZN5 1544 aa28.44■■■□□ 2.14
LIMD2-211ENST00000583211 ARHGEF40Q8TER5 1519 aa28.43■■■□□ 2.14
LIMD2-211ENST00000583211 SYCP2Q9BX26 1530 aa28.43■■■□□ 2.14
LIMD2-211ENST00000583211 ZNF777Q9ULD5 760 aaPredicted RBP28.43■■■□□ 2.14
LIMD2-211ENST00000583211 MYOM3Q5VTT5 1437 aa28.41■■■□□ 2.14
LIMD2-211ENST00000583211 HECW2Q9P2P5 1572 aa28.4■■■□□ 2.14
LIMD2-211ENST00000583211 ZFYVE16Q7Z3T8 1539 aa28.39■■■□□ 2.14
LIMD2-211ENST00000583211 TRAPPC8Q9Y2L5 1435 aa28.38■■■□□ 2.13
LIMD2-211ENST00000583211 MIA2Q96PC5 1412 aa28.37■■■□□ 2.13
LIMD2-211ENST00000583211 CAMSAP2Q08AD1 1489 aa28.36■■■□□ 2.13
LIMD2-211ENST00000583211 AFAP1Q8N556 730 aa28.35■■■□□ 2.13
LIMD2-211ENST00000583211 MLH3Q9UHC1 1453 aa28.34■■■□□ 2.13
LIMD2-211ENST00000583211 ZNF644Q9H582 1327 aaPredicted RBP28.32■■■□□ 2.12
LIMD2-211ENST00000583211 HNRNPMP52272 730 aaKnown RBP eCLIP28.31■■■□□ 2.12
LIMD2-211ENST00000583211 YEATS2Q9ULM3 1422 aa28.31■■■□□ 2.12
LIMD2-211ENST00000583211 MBD5Q9P267 1494 aa28.31■■■□□ 2.12
LIMD2-211ENST00000583211 KIDINS220Q9ULH0 1771 aa28.31■■■□□ 2.12
LIMD2-211ENST00000583211 ARHGEF5Q12774 1597 aa28.29■■■□□ 2.12
LIMD2-211ENST00000583211 INO80Q9ULG1 1556 aaPredicted RBP28.28■■■□□ 2.12
LIMD2-211ENST00000583211 ABCA6Q8N139 1617 aa28.27■■■□□ 2.12
LIMD2-211ENST00000583211 PTPN23Q9H3S7 1636 aa28.27■■■□□ 2.12
LIMD2-211ENST00000583211 DIP2CQ9Y2E4 1556 aa28.26■■■□□ 2.11
LIMD2-211ENST00000583211 RSPH4AQ5TD94 716 aa28.25■■■□□ 2.11
LIMD2-211ENST00000583211 ATP10AO60312 1499 aa28.25■■■□□ 2.11
LIMD2-211ENST00000583211 CCDC141Q6ZP82 1450 aa28.25■■■□□ 2.11
LIMD2-211ENST00000583211 FGD6Q6ZV73 1430 aa28.25■■■□□ 2.11
LIMD2-211ENST00000583211 ATP7AQ04656 1500 aa28.24■■■□□ 2.11
LIMD2-211ENST00000583211 REREQ9P2R6 1566 aa28.24■■■□□ 2.11
LIMD2-211ENST00000583211 C9orf84Q5VXU9 1444 aa28.22■■■□□ 2.11
LIMD2-211ENST00000583211 SPAG9O60271 1321 aaKnown RBP28.21■■■□□ 2.11
LIMD2-211ENST00000583211 SIGLEC1Q9BZZ2 1709 aa28.21■■■□□ 2.11
LIMD2-211ENST00000583211 MYT1LQ9UL68 1186 aa28.21■■■□□ 2.11
LIMD2-211ENST00000583211 TCOF1Q13428 1488 aaKnown RBP28.21■■■□□ 2.11
LIMD2-211ENST00000583211 BCORL1Q5H9F3 1711 aa28.18■■■□□ 2.1
LIMD2-211ENST00000583211 RTEL1-TNFRSF6BF6WH68 1400 aa28.18■■■□□ 2.1
LIMD2-211ENST00000583211 ADGBQ8N7X0 1667 aa28.17■■■□□ 2.1
LIMD2-211ENST00000583211 CROCC2H7BZ55 1655 aa28.16■■■□□ 2.1
LIMD2-211ENST00000583211 MAST1Q9Y2H9 1570 aa28.15■■■□□ 2.1
LIMD2-211ENST00000583211 KDM4FA0A1W2PPD8 638 aa28.13■■■□□ 2.09
LIMD2-211ENST00000583211 DNMT1P26358 1616 aaKnown RBP28.13■■■□□ 2.09
LIMD2-211ENST00000583211 ADAMTSL3P82987 1691 aa28.13■■■□□ 2.09
LIMD2-211ENST00000583211 ARID4BQ4LE39 1312 aaPredicted RBP28.12■■■□□ 2.09
LIMD2-211ENST00000583211 AGLP35573 1532 aa28.1■■■□□ 2.09
LIMD2-211ENST00000583211 TSPY4P0CV99 314 aa28.09■■■□□ 2.09
LIMD2-211ENST00000583211 TSPY10P0CW01 314 aa28.09■■■□□ 2.09
LIMD2-211ENST00000583211 PLXNC1O60486 1568 aa28.08■■■□□ 2.09
LIMD2-211ENST00000583211 PPARGC1BQ86YN6 1023 aaKnown RBP28.08■■■□□ 2.09
LIMD2-211ENST00000583211 SHANK2Q9UPX8 1470 aa28.08■■■□□ 2.09
LIMD2-211ENST00000583211 A2MP01023 1474 aa28.05■■■□□ 2.08
LIMD2-211ENST00000583211 ABCC5O15440 1437 aa28.04■■■□□ 2.08
LIMD2-211ENST00000583211 DAPK1P53355 1430 aa28.04■■■□□ 2.08
LIMD2-211ENST00000583211 FER1L4A9Z1Z3 1794 aa28.03■■■□□ 2.08
LIMD2-211ENST00000583211 MADDQ8WXG6 1647 aa28.03■■■□□ 2.08
LIMD2-211ENST00000583211 FAM50AQ14320 339 aaKnown RBP27.98■■■□□ 2.07
LIMD2-211ENST00000583211 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.98■■■□□ 2.07
LIMD2-211ENST00000583211 RIMS1Q86UR5 1692 aaKnown RBP27.97■■■□□ 2.07
LIMD2-211ENST00000583211 DHX29Q7Z478 1369 aaKnown RBP27.96■■■□□ 2.07
LIMD2-211ENST00000583211 AEBP2Q6ZN18 517 aaPredicted RBP27.95■■■□□ 2.06
LIMD2-211ENST00000583211 RRBP1Q9P2E9 1410 aaKnown RBP27.94■■■□□ 2.06
LIMD2-211ENST00000583211 MLECQ14165 292 aa27.92■■■□□ 2.06
LIMD2-211ENST00000583211 EIF2AK4Q9P2K8 1649 aaKnown RBP27.92■■■□□ 2.06
LIMD2-211ENST00000583211 DUOX2Q9NRD8 1548 aa27.91■■■□□ 2.06
LIMD2-211ENST00000583211 PTPRMP28827 1452 aa27.89■■■□□ 2.06
LIMD2-211ENST00000583211 ADGRL2O95490 1459 aa27.89■■■□□ 2.05
LIMD2-211ENST00000583211 ANKRD30AQ9BXX3 1397 aa27.86■■■□□ 2.05
LIMD2-211ENST00000583211 KIF15Q9NS87 1388 aa27.86■■■□□ 2.05
LIMD2-211ENST00000583211 NCOA1Q15788 1441 aa27.84■■■□□ 2.05
LIMD2-211ENST00000583211 RNF17Q9BXT8 1623 aaKnown RBP27.84■■■□□ 2.05
LIMD2-211ENST00000583211 MROH2AA6NES4 1674 aa27.83■■■□□ 2.05
LIMD2-211ENST00000583211 ERBINQ96RT1 1412 aa27.82■■■□□ 2.04
LIMD2-211ENST00000583211 CHIC2Q9UKJ5 165 aa27.81■■■□□ 2.04
LIMD2-211ENST00000583211 PTPRKQ15262 1439 aa27.81■■■□□ 2.04
LIMD2-211ENST00000583211 CNTLNQ9NXG0 1405 aa27.81■■■□□ 2.04
LIMD2-211ENST00000583211 FAM135AQ9P2D6 1515 aa27.81■■■□□ 2.04
LIMD2-211ENST00000583211 PPP6R1Q9UPN7 881 aa27.8■■■□□ 2.04
LIMD2-211ENST00000583211 CLTCQ00610 1675 aaKnown RBP27.8■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms