RNA–Protein interactions for RNA: ENST00000583038.5

ERBB2-214, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 4,930 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-214ENST00000583038 IPO8O15397 1037 aaKnown RBP20.94■□□□□ 0.94
ERBB2-214ENST00000583038 RAB3GAP2Q9H2M9 1393 aa20.94■□□□□ 0.94
ERBB2-214ENST00000583038 MPHOSPH9Q99550 1183 aa20.93■□□□□ 0.94
ERBB2-214ENST00000583038 HDGFL2Q7Z4V5 671 aaPredicted RBP20.93■□□□□ 0.94
ERBB2-214ENST00000583038 CALD1Q05682 793 aaKnown RBP20.93■□□□□ 0.94
ERBB2-214ENST00000583038 RSPH4AQ5TD94 716 aa20.93■□□□□ 0.94
ERBB2-214ENST00000583038 FGD1P98174 961 aa20.92■□□□□ 0.94
ERBB2-214ENST00000583038 KCNJ4P48050 445 aa20.92■□□□□ 0.94
ERBB2-214ENST00000583038 HSCBQ8IWL3 235 aa20.92■□□□□ 0.94
ERBB2-214ENST00000583038 NUP155O75694 1391 aa20.91■□□□□ 0.94
ERBB2-214ENST00000583038 DNTTIP2Q5QJE6 756 aaKnown RBP20.9■□□□□ 0.94
ERBB2-214ENST00000583038 CHMP4AQ9BY43 222 aa20.9■□□□□ 0.94
ERBB2-214ENST00000583038 MCCP23508 829 aa20.89■□□□□ 0.94
ERBB2-214ENST00000583038 NRDCO43847 1150 aa20.89■□□□□ 0.94
ERBB2-214ENST00000583038 GGT6Q6P531 493 aa20.88■□□□□ 0.93
ERBB2-214ENST00000583038 ABCC8Q09428 1581 aa20.87■□□□□ 0.93
ERBB2-214ENST00000583038 GOLGA6L6A8MZA4 724 aa20.87■□□□□ 0.93
ERBB2-214ENST00000583038 RTF1Q92541 710 aaKnown RBP20.87■□□□□ 0.93
ERBB2-214ENST00000583038 ROCK2O75116 1388 aaKnown RBP20.87■□□□□ 0.93
ERBB2-214ENST00000583038 EIF3AQ14152 1382 aaKnown RBP20.86■□□□□ 0.93
ERBB2-214ENST00000583038 TDRD9Q8NDG6 1382 aaKnown RBP20.84■□□□□ 0.93
ERBB2-214ENST00000583038 TOP2AP11388 1531 aaKnown RBP20.83■□□□□ 0.93
ERBB2-214ENST00000583038 RCAN3Q9UKA8 241 aa20.83■□□□□ 0.92
ERBB2-214ENST00000583038 GOLGA6L4A6NEF3 574 aa20.82■□□□□ 0.92
ERBB2-214ENST00000583038 RAPGEF2Q9Y4G8 1499 aa20.82■□□□□ 0.92
ERBB2-214ENST00000583038 L1TD1Q5T7N2 865 aaKnown RBP20.8■□□□□ 0.92
ERBB2-214ENST00000583038 RWDD1Q9H446 243 aaPredicted RBP20.8■□□□□ 0.92
ERBB2-214ENST00000583038 TCERG1O14776 1098 aaKnown RBP20.79■□□□□ 0.92
ERBB2-214ENST00000583038 NPHP1O15259 732 aa20.79■□□□□ 0.92
ERBB2-214ENST00000583038 MLECQ14165 292 aa20.79■□□□□ 0.92
ERBB2-214ENST00000583038 U2AF1L5P0DN76 240 aaPredicted RBP20.79■□□□□ 0.92
ERBB2-214ENST00000583038 U2AF1Q01081 240 aaKnown RBP eCLIP20.79■□□□□ 0.92
ERBB2-214ENST00000583038 GOLGA2Q08379 1002 aa20.79■□□□□ 0.92
ERBB2-214ENST00000583038 PDE3BQ13370 1112 aa20.79■□□□□ 0.92
ERBB2-214ENST00000583038 CCDC18Q5T9S5 1454 aa20.78■□□□□ 0.92
ERBB2-214ENST00000583038 CADPSQ9ULU8 1353 aa20.78■□□□□ 0.92
ERBB2-214ENST00000583038 SAFB2Q14151 953 aaKnown RBP eCLIP20.78■□□□□ 0.92
ERBB2-214ENST00000583038 FOXD1Q16676 465 aa20.77■□□□□ 0.92
ERBB2-214ENST00000583038 NLRP13Q86W25 1043 aa20.77■□□□□ 0.91
ERBB2-214ENST00000583038 PTMSP20962 102 aa20.76■□□□□ 0.91
ERBB2-214ENST00000583038 PLCB2Q00722 1185 aa20.76■□□□□ 0.91
ERBB2-214ENST00000583038 STK26Q9P289 416 aa20.75■□□□□ 0.91
ERBB2-214ENST00000583038 TERF2IPQ9NYB0 399 aa20.74■□□□□ 0.91
ERBB2-214ENST00000583038 L3MBTL2Q969R5 705 aa20.74■□□□□ 0.91
ERBB2-214ENST00000583038 HDAC5Q9UQL6 1122 aa20.74■□□□□ 0.91
ERBB2-214ENST00000583038 PHLDB1Q86UU1 1377 aa20.74■□□□□ 0.91
ERBB2-214ENST00000583038 RBM19Q9Y4C8 960 aaKnown RBP20.73■□□□□ 0.91
ERBB2-214ENST00000583038 SOX12O15370 315 aa20.72■□□□□ 0.91
ERBB2-214ENST00000583038 TPRNQ4KMQ1 711 aa20.72■□□□□ 0.91
ERBB2-214ENST00000583038 PMFBP1Q8TBY8 1022 aa20.72■□□□□ 0.91
ERBB2-214ENST00000583038 NAP1L5Q96NT1 182 aaPredicted RBP20.71■□□□□ 0.91
ERBB2-214ENST00000583038 KIAA1211Q6ZU35 1233 aa20.71■□□□□ 0.91
ERBB2-214ENST00000583038 NAP1L2Q9ULW6 460 aaPredicted RBP20.71■□□□□ 0.91
ERBB2-214ENST00000583038 KIF3BO15066 747 aa20.7■□□□□ 0.9
ERBB2-214ENST00000583038 SPAG9O60271 1321 aaKnown RBP20.69■□□□□ 0.9
ERBB2-214ENST00000583038 GBP4Q96PP9 640 aa20.68■□□□□ 0.9
ERBB2-214ENST00000583038 CHAF1AQ13111 956 aaPredicted RBP20.67■□□□□ 0.9
ERBB2-214ENST00000583038 FHOD3Q2V2M9 1422 aa20.67■□□□□ 0.9
ERBB2-214ENST00000583038 LMOD3Q0VAK6 560 aa20.66■□□□□ 0.9
ERBB2-214ENST00000583038 STK31Q9BXU1 1019 aa20.66■□□□□ 0.9
ERBB2-214ENST00000583038 TRHP20396 242 aaPredicted RBP20.65■□□□□ 0.9
ERBB2-214ENST00000583038 ITPRIPQ8IWB1 547 aa20.65■□□□□ 0.9
ERBB2-214ENST00000583038 HMMRO75330 724 aa20.64■□□□□ 0.89
ERBB2-214ENST00000583038 MSNP26038 577 aaKnown RBP20.63■□□□□ 0.89
ERBB2-214ENST00000583038 HNRNPMP52272 730 aaKnown RBP eCLIP20.61■□□□□ 0.89
ERBB2-214ENST00000583038 HTATSF1O43719 755 aaKnown RBP20.61■□□□□ 0.89
ERBB2-214ENST00000583038 JPH4Q96JJ6 628 aa20.61■□□□□ 0.89
ERBB2-214ENST00000583038 KIF15Q9NS87 1388 aa20.61■□□□□ 0.89
ERBB2-214ENST00000583038 SMC4Q9NTJ3 1288 aa20.6■□□□□ 0.89
ERBB2-214ENST00000583038 WIZO95785 1651 aa20.59■□□□□ 0.89
ERBB2-214ENST00000583038 WASHC2CQ9Y4E1 1318 aa20.58■□□□□ 0.89
ERBB2-214ENST00000583038 ATAD2BQ9ULI0 1458 aa20.58■□□□□ 0.89
ERBB2-214ENST00000583038 UACAQ9BZF9 1416 aa20.58■□□□□ 0.89
ERBB2-214ENST00000583038 CENPJQ9HC77 1338 aaPredicted RBP20.58■□□□□ 0.88
ERBB2-214ENST00000583038 PAK3O75914 559 aaPredicted RBP20.57■□□□□ 0.88
ERBB2-214ENST00000583038 EID1Q9Y6B2 187 aa20.57■□□□□ 0.88
ERBB2-214ENST00000583038 CCDC144AA2RUR9 1427 aa20.56■□□□□ 0.88
ERBB2-214ENST00000583038 MYBBP1AQ9BQG0 1328 aaKnown RBP20.56■□□□□ 0.88
ERBB2-214ENST00000583038 SYAP1Q96A49 352 aaPredicted RBP20.56■□□□□ 0.88
ERBB2-214ENST00000583038 TAOK2Q9UL54 1235 aa20.56■□□□□ 0.88
ERBB2-214ENST00000583038 CSB-PGBD3P0DP91 1061 aa20.55■□□□□ 0.88
ERBB2-214ENST00000583038 APBB1O00213 710 aa20.55■□□□□ 0.88
ERBB2-214ENST00000583038 DEKP35659 375 aaKnown RBP20.55■□□□□ 0.88
ERBB2-214ENST00000583038 GPATCH3Q96I76 525 aa20.55■□□□□ 0.88
ERBB2-214ENST00000583038 DHX57Q6P158 1386 aaKnown RBP20.54■□□□□ 0.88
ERBB2-214ENST00000583038 GNL2Q13823 731 aaKnown RBP20.53■□□□□ 0.88
ERBB2-214ENST00000583038 SPRYD3Q8NCJ5 442 aa20.51■□□□□ 0.87
ERBB2-214ENST00000583038 DRC7Q8IY82 874 aa20.51■□□□□ 0.87
ERBB2-214ENST00000583038 NGEFQ8N5V2 710 aa20.51■□□□□ 0.87
ERBB2-214ENST00000583038 RTN4Q9NQC3 1192 aaKnown RBP20.49■□□□□ 0.87
ERBB2-214ENST00000583038 IPO9Q96P70 1041 aaKnown RBP20.49■□□□□ 0.87
ERBB2-214ENST00000583038 ST20-MTHFSA0A0A6YYL1 179 aa20.49■□□□□ 0.87
ERBB2-214ENST00000583038 NGDNQ8NEJ9 315 aaKnown RBP20.49■□□□□ 0.87
ERBB2-214ENST00000583038 CCDC34Q96HJ3 373 aa20.48■□□□□ 0.87
ERBB2-214ENST00000583038 TULP1O00294 542 aaPredicted RBP20.48■□□□□ 0.87
ERBB2-214ENST00000583038 KIAA2012Q0VF49 1180 aa20.48■□□□□ 0.87
ERBB2-214ENST00000583038 VGFO15240 615 aaPredicted RBP20.47■□□□□ 0.87
ERBB2-214ENST00000583038 SLKQ9H2G2 1235 aaPredicted RBP20.47■□□□□ 0.87
ERBB2-214ENST00000583038 CSPP1Q1MSJ5 1256 aa20.45■□□□□ 0.86
ERBB2-214ENST00000583038 PRKRIP1Q9H875 184 aaPredicted RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms