RNA–Protein interactions for RNA: ENST00000582789.5

SENP3-207, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-207ENST00000582789 VASPP50552 380 aaPredicted RBP9.92□□□□□ -0.82
SENP3-207ENST00000582789 OCEL1Q9H607 264 aa9.92□□□□□ -0.82
SENP3-207ENST00000582789 POTEB3A0JP26 581 aa9.91□□□□□ -0.82
SENP3-207ENST00000582789 POTEBQ6S5H4 581 aa9.91□□□□□ -0.82
SENP3-207ENST00000582789 IFNLR1Q8IU57 520 aaPredicted RBP9.91□□□□□ -0.82
SENP3-207ENST00000582789 PDIA4P13667 645 aaKnown RBP9.89□□□□□ -0.83
SENP3-207ENST00000582789 RNF166Q96A37 237 aaPredicted RBP9.88□□□□□ -0.83
SENP3-207ENST00000582789 RSPH6AQ9H0K4 717 aa9.88□□□□□ -0.83
SENP3-207ENST00000582789 IFNL1Q8IU54 200 aa9.87□□□□□ -0.83
SENP3-207ENST00000582789 ZMYND15Q9H091 742 aa9.86□□□□□ -0.83
SENP3-207ENST00000582789 ARID3AQ99856 593 aa9.85□□□□□ -0.83
SENP3-207ENST00000582789 PUS7Q96PZ0 661 aaKnown RBP9.84□□□□□ -0.83
SENP3-207ENST00000582789 MIER1Q8N108 512 aa9.83□□□□□ -0.84
SENP3-207ENST00000582789 NECTIN2Q92692 538 aa9.83□□□□□ -0.84
SENP3-207ENST00000582789 C3orf67Q6ZVT6 689 aa9.82□□□□□ -0.84
SENP3-207ENST00000582789 ECM2O94769 699 aaPredicted RBP9.77□□□□□ -0.85
SENP3-207ENST00000582789 UBE2Q2Q8WVN8 375 aa9.77□□□□□ -0.85
SENP3-207ENST00000582789 MYT1LQ9UL68 1186 aa9.76□□□□□ -0.85
SENP3-207ENST00000582789 BRD2P25440 801 aaKnown RBP9.75□□□□□ -0.85
SENP3-207ENST00000582789 C1orf115Q9H7X2 142 aa9.75□□□□□ -0.85
SENP3-207ENST00000582789 NEUROD2Q15784 382 aa9.73□□□□□ -0.85
SENP3-207ENST00000582789 L3MBTL3Q96JM7 780 aaPredicted RBP9.72□□□□□ -0.85
SENP3-207ENST00000582789 ERBB3P21860 1342 aa9.68□□□□□ -0.86
SENP3-207ENST00000582789 KCTD17Q8N5Z5 321 aa9.68□□□□□ -0.86
SENP3-207ENST00000582789 PROM2Q8N271 834 aa9.67□□□□□ -0.86
SENP3-207ENST00000582789 RGL2O15211 777 aa9.66□□□□□ -0.86
SENP3-207ENST00000582789 FAM212AQ96EL1 285 aa9.66□□□□□ -0.86
SENP3-207ENST00000582789 RAD21O60216 631 aa9.65□□□□□ -0.86
SENP3-207ENST00000582789 DHX37Q8IY37 1157 aaKnown RBP9.65□□□□□ -0.86
SENP3-207ENST00000582789 NUBP1P53384 320 aa9.64□□□□□ -0.87
SENP3-207ENST00000582789 LMOD2Q6P5Q4 547 aa9.64□□□□□ -0.87
SENP3-207ENST00000582789 PLCD3Q8N3E9 789 aa9.64□□□□□ -0.87
SENP3-207ENST00000582789 PDCD7Q8N8D1 485 aaKnown RBP9.64□□□□□ -0.87
SENP3-207ENST00000582789 RGS22Q8NE09 1264 aa9.64□□□□□ -0.87
SENP3-207ENST00000582789 ZBTB47Q9UFB7 747 aaPredicted RBP9.64□□□□□ -0.87
SENP3-207ENST00000582789 ZNF710Q8N1W2 664 aa9.63□□□□□ -0.87
SENP3-207ENST00000582789 CHGAP10645 457 aaKnown RBP9.61□□□□□ -0.87
SENP3-207ENST00000582789 HOXB1P14653 301 aaPredicted RBP9.61□□□□□ -0.87
SENP3-207ENST00000582789 PTGER2P43116 358 aa9.6□□□□□ -0.87
SENP3-207ENST00000582789 GOLGA2Q08379 1002 aa9.6□□□□□ -0.87
SENP3-207ENST00000582789 MKRN3Q13064 507 aaKnown RBP9.59□□□□□ -0.87
SENP3-207ENST00000582789 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.59□□□□□ -0.87
SENP3-207ENST00000582789 CCDC180Q9P1Z9 1646 aa9.59□□□□□ -0.87
SENP3-207ENST00000582789 HOXB3P14651 431 aaPredicted RBP9.57□□□□□ -0.88
SENP3-207ENST00000582789 ARID3CA6NKF2 412 aa9.56□□□□□ -0.88
SENP3-207ENST00000582789 PDE4CQ08493 712 aa9.56□□□□□ -0.88
SENP3-207ENST00000582789 TAF7LQ5H9L4 462 aa9.56□□□□□ -0.88
SENP3-207ENST00000582789 VARS2Q5ST30 1063 aaKnown RBP9.56□□□□□ -0.88
SENP3-207ENST00000582789 MTMR7Q9Y216 660 aa9.56□□□□□ -0.88
SENP3-207ENST00000582789 APBB1O00213 710 aa9.55□□□□□ -0.88
SENP3-207ENST00000582789 DOK7Q18PE1 504 aa9.54□□□□□ -0.88
SENP3-207ENST00000582789 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.54□□□□□ -0.88
SENP3-207ENST00000582789 PCDHB8Q9UN66 801 aa9.54□□□□□ -0.88
SENP3-207ENST00000582789 PYGBP11216 843 aa9.53□□□□□ -0.88
SENP3-207ENST00000582789 RBM25P49756 843 aaKnown RBP9.53□□□□□ -0.88
SENP3-207ENST00000582789 POLR3GLQ9BT43 218 aa9.53□□□□□ -0.88
SENP3-207ENST00000582789 G3V3G9 751 aa9.51□□□□□ -0.89
SENP3-207ENST00000582789 DCAF8Q5TAQ9 597 aa9.51□□□□□ -0.89
SENP3-207ENST00000582789 FAM9AQ8IZU1 332 aaPredicted RBP9.51□□□□□ -0.89
SENP3-207ENST00000582789 ZNF687Q8N1G0 1237 aa9.51□□□□□ -0.89
SENP3-207ENST00000582789 SPOCK2Q92563 424 aa9.51□□□□□ -0.89
SENP3-207ENST00000582789 PLA2G2EQ9NZK7 142 aa9.51□□□□□ -0.89
SENP3-207ENST00000582789 ZNF428Q96B54 188 aa9.5□□□□□ -0.89
SENP3-207ENST00000582789 BCL11AQ9H165 835 aa9.5□□□□□ -0.89
SENP3-207ENST00000582789 RIMBP2O15034 1052 aa9.49□□□□□ -0.89
SENP3-207ENST00000582789 TRAIPQ9BWF2 469 aa9.49□□□□□ -0.89
SENP3-207ENST00000582789 TMCO4Q5TGY1 634 aa9.47□□□□□ -0.89
SENP3-207ENST00000582789 FOXD4L5Q5VV16 416 aaPredicted RBP9.47□□□□□ -0.89
SENP3-207ENST00000582789 P3H3Q8IVL6 736 aa9.47□□□□□ -0.89
SENP3-207ENST00000582789 FOXD4L4Q8WXT5 416 aaPredicted RBP9.47□□□□□ -0.89
SENP3-207ENST00000582789 SLC24A3Q9HC58 644 aa9.47□□□□□ -0.89
SENP3-207ENST00000582789 ANKRD13DQ6ZTN6 518 aa9.46□□□□□ -0.9
SENP3-207ENST00000582789 MFAP1P55081 439 aaKnown RBP9.45□□□□□ -0.9
SENP3-207ENST00000582789 ZC3H15Q8WU90 426 aaKnown RBP9.45□□□□□ -0.9
SENP3-207ENST00000582789 ABCC9O60706 1549 aa9.45□□□□□ -0.9
SENP3-207ENST00000582789 HS6ST3Q8IZP7 471 aa9.43□□□□□ -0.9
SENP3-207ENST00000582789 ZCCHC6Q5VYS8 1495 aaKnown RBP9.42□□□□□ -0.9
SENP3-207ENST00000582789 E9PSI1 815 aa9.42□□□□□ -0.9
SENP3-207ENST00000582789 CCDC82Q8N4S0 544 aa9.42□□□□□ -0.9
SENP3-207ENST00000582789 BCCIPQ9P287 314 aaKnown RBP eCLIP9.42□□□□□ -0.9
SENP3-207ENST00000582789 BOLA1Q9Y3E2 137 aa9.42□□□□□ -0.9
SENP3-207ENST00000582789 NEFLP07196 543 aa9.41□□□□□ -0.9
SENP3-207ENST00000582789 AEBP1Q8IUX7 1158 aa9.41□□□□□ -0.9
SENP3-207ENST00000582789 USP35Q9P2H5 1018 aa9.41□□□□□ -0.9
SENP3-207ENST00000582789 DPY19L2Q6NUT2 758 aa9.4□□□□□ -0.9
SENP3-207ENST00000582789 FAM177A1Q8N128 213 aaPredicted RBP9.4□□□□□ -0.9
SENP3-207ENST00000582789 ZNF467Q7Z7K2 595 aaPredicted RBP9.39□□□□□ -0.91
SENP3-207ENST00000582789 RSPH4AQ5TD94 716 aa9.38□□□□□ -0.91
SENP3-207ENST00000582789 ZSWIM6Q9HCJ5 1215 aa9.36□□□□□ -0.91
SENP3-207ENST00000582789 ILDR1Q86SU0 546 aaPredicted RBP9.35□□□□□ -0.91
SENP3-207ENST00000582789 HCSTQ9UBK5 93 aa9.35□□□□□ -0.91
SENP3-207ENST00000582789 GZF1Q9H116 711 aaPredicted RBP9.34□□□□□ -0.91
SENP3-207ENST00000582789 GTPBP6O43824 516 aaPredicted RBP9.32□□□□□ -0.92
SENP3-207ENST00000582789 PSEN1P49768 467 aa9.32□□□□□ -0.92
SENP3-207ENST00000582789 LSM11P83369 360 aaKnown RBP eCLIP9.31□□□□□ -0.929e-7■■□□□ 13.5
SENP3-207ENST00000582789 NKX1-1Q15270 411 aaPredicted RBP9.31□□□□□ -0.92
SENP3-207ENST00000582789 KCNV2Q8TDN2 545 aa9.3□□□□□ -0.92
SENP3-207ENST00000582789 GPR153Q6NV75 609 aa9.29□□□□□ -0.92
SENP3-207ENST00000582789 IL27Q8NEV9 243 aa9.29□□□□□ -0.92
SENP3-207ENST00000582789 DCAF1Q9Y4B6 1507 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms