RNA–Protein interactions for RNA: ENST00000582789.5

SENP3-207, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-207ENST00000582789 AEBP2Q6ZN18 517 aaPredicted RBP22.2■■□□□ 1.14
SENP3-207ENST00000582789 CHIC1Q5VXU3 224 aa20.85■□□□□ 0.93
SENP3-207ENST00000582789 SENP3Q9H4L4 574 aaPredicted RBP19.16■□□□□ 0.66
SENP3-207ENST00000582789 PHF23Q9BUL5 403 aaPredicted RBP18.78■□□□□ 0.6
SENP3-207ENST00000582789 POTEDQ86YR6 584 aa18.16■□□□□ 0.5
SENP3-207ENST00000582789 FOXD1Q16676 465 aa17.92■□□□□ 0.46
SENP3-207ENST00000582789 MSH5O43196 834 aa17.16■□□□□ 0.34
SENP3-207ENST00000582789 PIAS4Q8N2W9 510 aaPredicted RBP16.59■□□□□ 0.25
SENP3-207ENST00000582789 PPP6R1Q9UPN7 881 aa16.07■□□□□ 0.16
SENP3-207ENST00000582789 ADRA2BP18089 450 aa16■□□□□ 0.15
SENP3-207ENST00000582789 PLPPR3Q6T4P5 718 aa15.87■□□□□ 0.13
SENP3-207ENST00000582789 CACNB1Q02641 598 aaPredicted RBP15.28■□□□□ 0.04
SENP3-207ENST00000582789 DMRT2Q9Y5R5 561 aa15.03■□□□□ -0
SENP3-207ENST00000582789 MAPK8IP2Q13387 824 aaPredicted RBP14.95□□□□□ -0.02
SENP3-207ENST00000582789 SCAF1Q9H7N4 1312 aaKnown RBP14.73□□□□□ -0.05
SENP3-207ENST00000582789 DCAF8L1A6NGE4 600 aa14.56□□□□□ -0.08
SENP3-207ENST00000582789 RNF39Q9H2S5 420 aa14.51□□□□□ -0.09
SENP3-207ENST00000582789 C1QBPQ07021 282 aaKnown RBP14.29□□□□□ -0.12
SENP3-207ENST00000582789 HOXD11P31277 338 aaPredicted RBP14.13□□□□□ -0.15
SENP3-207ENST00000582789 POTEHQ6S545 545 aa14.1□□□□□ -0.15
SENP3-207ENST00000582789 RNF216Q9NWF9 866 aaPredicted RBP13.82□□□□□ -0.2
SENP3-207ENST00000582789 DNAJC5BQ9UF47 199 aa13.81□□□□□ -0.2
SENP3-207ENST00000582789 PPP4R3CPQ6ZMV5 832 aa13.78□□□□□ -0.2
SENP3-207ENST00000582789 CNKSR2Q8WXI2 1034 aa13.74□□□□□ -0.21
SENP3-207ENST00000582789 SLC24A1O60721 1099 aa13.7□□□□□ -0.22
SENP3-207ENST00000582789 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.54□□□□□ -0.24
SENP3-207ENST00000582789 DSG3P32926 999 aa13.31□□□□□ -0.28
SENP3-207ENST00000582789 CAPN15O75808 1086 aa13.26□□□□□ -0.29
SENP3-207ENST00000582789 SPINK5Q9NQ38 1064 aaPredicted RBP13.16□□□□□ -0.3
SENP3-207ENST00000582789 U3KPZ7 1027 aaPredicted RBP13.08□□□□□ -0.32
SENP3-207ENST00000582789 NCBP3Q53F19 620 aaKnown RBP13.05□□□□□ -0.32
SENP3-207ENST00000582789 EHMT2Q96KQ7 1210 aa12.93□□□□□ -0.34
SENP3-207ENST00000582789 ABCB7O75027 752 aa12.84□□□□□ -0.35
SENP3-207ENST00000582789 TRHP20396 242 aaPredicted RBP12.83□□□□□ -0.36
SENP3-207ENST00000582789 CHRDL2Q6WN34 429 aa12.81□□□□□ -0.36
SENP3-207ENST00000582789 SP7Q8TDD2 431 aaPredicted RBP12.81□□□□□ -0.36
SENP3-207ENST00000582789 NPM3O75607 178 aaKnown RBP12.79□□□□□ -0.36
SENP3-207ENST00000582789 RBM42Q9BTD8 480 aaKnown RBP12.79□□□□□ -0.36
SENP3-207ENST00000582789 ZNF219Q9P2Y4 722 aaPredicted RBP12.77□□□□□ -0.37
SENP3-207ENST00000582789 APLP2Q06481 763 aa12.74□□□□□ -0.37
SENP3-207ENST00000582789 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.5□□□□□ -0.41
SENP3-207ENST00000582789 HNRNPUL2Q1KMD3 747 aaKnown RBP12.5□□□□□ -0.41
SENP3-207ENST00000582789 SLC4A2P04920 1241 aa12.4□□□□□ -0.42
SENP3-207ENST00000582789 RTN4Q9NQC3 1192 aaKnown RBP12.4□□□□□ -0.42
SENP3-207ENST00000582789 HAX1O00165 279 aa12.39□□□□□ -0.43
SENP3-207ENST00000582789 SAMD1Q6SPF0 538 aaPredicted RBP12.36□□□□□ -0.43
SENP3-207ENST00000582789 AMER1Q5JTC6 1135 aaPredicted RBP12.33□□□□□ -0.44
SENP3-207ENST00000582789 DAXXQ9UER7 740 aaPredicted RBP12.32□□□□□ -0.44
SENP3-207ENST00000582789 PIP4P2Q8N4L2 257 aa12.3□□□□□ -0.44
SENP3-207ENST00000582789 AKT1S1Q96B36 256 aa12.28□□□□□ -0.44
SENP3-207ENST00000582789 POLA2Q14181 598 aa12.26□□□□□ -0.45
SENP3-207ENST00000582789 REM2Q8IYK8 340 aaPredicted RBP12.15□□□□□ -0.46
SENP3-207ENST00000582789 CSRNP3Q8WYN3 585 aa12.13□□□□□ -0.47
SENP3-207ENST00000582789 KCNA4P22459 653 aa12.09□□□□□ -0.47
SENP3-207ENST00000582789 FXR2P51116 673 aaKnown RBP eCLIP12.08□□□□□ -0.48
SENP3-207ENST00000582789 EVX2Q03828 476 aa12.06□□□□□ -0.48
SENP3-207ENST00000582789 PITPNM1O00562 1244 aa12.03□□□□□ -0.48
SENP3-207ENST00000582789 PLSCR2Q9NRY7 297 aa12.03□□□□□ -0.48
SENP3-207ENST00000582789 LHX8Q68G74 356 aa12.01□□□□□ -0.49
SENP3-207ENST00000582789 ZBTB12Q9Y330 459 aaPredicted RBP11.97□□□□□ -0.49
SENP3-207ENST00000582789 OSCARQ8IYS5 282 aa11.89□□□□□ -0.51
SENP3-207ENST00000582789 MYCNP04198 464 aaPredicted RBP11.88□□□□□ -0.51
SENP3-207ENST00000582789 GABBR2O75899 941 aa11.79□□□□□ -0.52
SENP3-207ENST00000582789 ARXQ96QS3 562 aa11.76□□□□□ -0.53
SENP3-207ENST00000582789 PRKAR2AP13861 404 aaKnown RBP11.74□□□□□ -0.53
SENP3-207ENST00000582789 C19orf67A6NJJ6 358 aa11.73□□□□□ -0.53
SENP3-207ENST00000582789 PRKCSHP14314 528 aaPredicted RBP11.72□□□□□ -0.53
SENP3-207ENST00000582789 SLC4A1APQ9BWU0 796 aaKnown RBP11.63□□□□□ -0.55
SENP3-207ENST00000582789 ATF5Q9Y2D1 282 aaPredicted RBP11.62□□□□□ -0.55
SENP3-207ENST00000582789 CLEC11AQ9Y240 323 aa11.6□□□□□ -0.55
SENP3-207ENST00000582789 SPDYE1Q8NFV5 336 aaPredicted RBP11.54□□□□□ -0.56
SENP3-207ENST00000582789 TTBK1Q5TCY1 1321 aaPredicted RBP11.53□□□□□ -0.56
SENP3-207ENST00000582789 TAOK2Q9UL54 1235 aa11.52□□□□□ -0.57
SENP3-207ENST00000582789 TIMELESSQ9UNS1 1208 aa11.52□□□□□ -0.57
SENP3-207ENST00000582789 SPDYE2BA6NHP3 402 aa11.5□□□□□ -0.57
SENP3-207ENST00000582789 SPDYE6P0CI01 402 aa11.5□□□□□ -0.57
SENP3-207ENST00000582789 SPDYE2Q495Y8 402 aa11.5□□□□□ -0.57
SENP3-207ENST00000582789 POTEIP0CG38 1075 aa11.48□□□□□ -0.57
SENP3-207ENST00000582789 BCANQ96GW7 911 aa11.47□□□□□ -0.57
SENP3-207ENST00000582789 CHADLQ6NUI6 762 aa11.41□□□□□ -0.58
SENP3-207ENST00000582789 PELP1Q8IZL8 1130 aaKnown RBP11.41□□□□□ -0.58
SENP3-207ENST00000582789 POTEMA6NI47 508 aa11.36□□□□□ -0.59
SENP3-207ENST00000582789 TULP1O00294 542 aaPredicted RBP11.36□□□□□ -0.59
SENP3-207ENST00000582789 HOMEZQ8IX15 550 aa11.36□□□□□ -0.59
SENP3-207ENST00000582789 DCBLD2Q96PD2 775 aa11.36□□□□□ -0.59
SENP3-207ENST00000582789 RANGAP1P46060 587 aaPredicted RBP11.35□□□□□ -0.59
SENP3-207ENST00000582789 CLCN6P51797 869 aa11.35□□□□□ -0.59
SENP3-207ENST00000582789 FBLN2P98095 1184 aa11.33□□□□□ -0.6
SENP3-207ENST00000582789 CD44P16070 742 aaKnown RBP11.32□□□□□ -0.6
SENP3-207ENST00000582789 MYT1Q01538 1121 aa11.32□□□□□ -0.6
SENP3-207ENST00000582789 TPRNQ4KMQ1 711 aa11.29□□□□□ -0.6
SENP3-207ENST00000582789 POTEGQ6S5H5 508 aa11.29□□□□□ -0.6
SENP3-207ENST00000582789 FOXD4L1Q9NU39 408 aa11.29□□□□□ -0.6
SENP3-207ENST00000582789 PLCB2Q00722 1185 aa11.28□□□□□ -0.6
SENP3-207ENST00000582789 ERICH6Q7L0X2 663 aa11.28□□□□□ -0.6
SENP3-207ENST00000582789 PRR29P0C7W0 189 aa11.27□□□□□ -0.61
SENP3-207ENST00000582789 ZNF692Q9BU19 519 aaPredicted RBP11.26□□□□□ -0.61
SENP3-207ENST00000582789 OTUD5Q96G74 571 aa11.25□□□□□ -0.61
SENP3-207ENST00000582789 PCDH10Q9P2E7 1040 aa11.25□□□□□ -0.61
SENP3-207ENST00000582789 SSUH2Q9Y2M2 353 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms