RNA–Protein interactions for RNA: ENST00000582293.1

RNF43-206, Transcript of ring finger protein 43, humanhuman

TSL 2

Gene RNF43, Length 324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-206ENST00000582293 AKNAQ7Z591 1439 aa25.89■■□□□ 1.74
RNF43-206ENST00000582293 NCOA2Q15596 1464 aa25.87■■□□□ 1.73
RNF43-206ENST00000582293 SUPT6HQ7KZ85 1726 aaKnown RBP25.87■■□□□ 1.73
RNF43-206ENST00000582293 ARHGAP5Q13017 1502 aa25.87■■□□□ 1.73
RNF43-206ENST00000582293 FRMPD1Q5SYB0 1578 aa25.86■■□□□ 1.73
RNF43-206ENST00000582293 EFCAB2Q5VUJ9 269 aa25.83■■□□□ 1.73
RNF43-206ENST00000582293 CCNB3Q8WWL7 1395 aa25.82■■□□□ 1.72
RNF43-206ENST00000582293 RICTORQ6R327 1708 aa25.8■■□□□ 1.72
RNF43-206ENST00000582293 ADGRL1O94910 1474 aa25.8■■□□□ 1.72
RNF43-206ENST00000582293 RAPGEF3O95398 923 aa25.79■■□□□ 1.72
RNF43-206ENST00000582293 SAMD9LQ8IVG5 1584 aa25.78■■□□□ 1.72
RNF43-206ENST00000582293 SCAPERQ9BY12 1400 aa25.78■■□□□ 1.72
RNF43-206ENST00000582293 DENND4BO75064 1496 aaPredicted RBP25.78■■□□□ 1.72
RNF43-206ENST00000582293 ARHGEF12Q9NZN5 1544 aa25.78■■□□□ 1.72
RNF43-206ENST00000582293 APLP2Q06481 763 aa25.77■■□□□ 1.72
RNF43-206ENST00000582293 ABCC1P33527 1531 aa25.77■■□□□ 1.72
RNF43-206ENST00000582293 ITSN2Q9NZM3 1697 aa25.77■■□□□ 1.72
RNF43-206ENST00000582293 POGZQ7Z3K3 1410 aa25.74■■□□□ 1.71
RNF43-206ENST00000582293 CFDP1Q9UEE9 299 aaPredicted RBP25.72■■□□□ 1.71
RNF43-206ENST00000582293 ZNF644Q9H582 1327 aaPredicted RBP25.69■■□□□ 1.7
RNF43-206ENST00000582293 ZMYM4Q5VZL5 1548 aa25.69■■□□□ 1.7
RNF43-206ENST00000582293 ZNF777Q9ULD5 760 aaPredicted RBP25.68■■□□□ 1.7
RNF43-206ENST00000582293 TRAPPC8Q9Y2L5 1435 aa25.68■■□□□ 1.7
RNF43-206ENST00000582293 SYCP2Q9BX26 1530 aa25.68■■□□□ 1.7
RNF43-206ENST00000582293 KDM5CP41229 1560 aa25.66■■□□□ 1.7
RNF43-206ENST00000582293 MYOM3Q5VTT5 1437 aa25.66■■□□□ 1.7
RNF43-206ENST00000582293 KIAA1107Q9UPP5 1409 aa25.64■■□□□ 1.7
RNF43-206ENST00000582293 AFAP1Q8N556 730 aa25.64■■□□□ 1.7
RNF43-206ENST00000582293 ZNF518AQ6AHZ1 1483 aa25.64■■□□□ 1.69
RNF43-206ENST00000582293 CAMSAP2Q08AD1 1489 aa25.62■■□□□ 1.69
RNF43-206ENST00000582293 MBD5Q9P267 1494 aa25.62■■□□□ 1.69
RNF43-206ENST00000582293 PLEKHH2Q8IVE3 1493 aa25.61■■□□□ 1.69
RNF43-206ENST00000582293 HNRNPMP52272 730 aaKnown RBP eCLIP25.61■■□□□ 1.69
RNF43-206ENST00000582293 ARHGEF40Q8TER5 1519 aa25.6■■□□□ 1.69
RNF43-206ENST00000582293 MIA2Q96PC5 1412 aa25.6■■□□□ 1.69
RNF43-206ENST00000582293 YEATS2Q9ULM3 1422 aa25.6■■□□□ 1.69
RNF43-206ENST00000582293 MAGI2Q86UL8 1455 aa25.58■■□□□ 1.69
RNF43-206ENST00000582293 PPARGC1BQ86YN6 1023 aaKnown RBP25.57■■□□□ 1.68
RNF43-206ENST00000582293 ZFYVE16Q7Z3T8 1539 aa25.57■■□□□ 1.68
RNF43-206ENST00000582293 HECW2Q9P2P5 1572 aa25.56■■□□□ 1.68
RNF43-206ENST00000582293 MLH3Q9UHC1 1453 aa25.55■■□□□ 1.68
RNF43-206ENST00000582293 FGD6Q6ZV73 1430 aa25.54■■□□□ 1.68
RNF43-206ENST00000582293 SIGLEC1Q9BZZ2 1709 aa25.53■■□□□ 1.68
RNF43-206ENST00000582293 KIDINS220Q9ULH0 1771 aa25.53■■□□□ 1.68
RNF43-206ENST00000582293 PTPN23Q9H3S7 1636 aa25.52■■□□□ 1.68
RNF43-206ENST00000582293 TCOF1Q13428 1488 aaKnown RBP25.51■■□□□ 1.67
RNF43-206ENST00000582293 ARHGEF5Q12774 1597 aa25.51■■□□□ 1.67
RNF43-206ENST00000582293 ABCA6Q8N139 1617 aa25.51■■□□□ 1.67
RNF43-206ENST00000582293 INO80Q9ULG1 1556 aaPredicted RBP25.5■■□□□ 1.67
RNF43-206ENST00000582293 DIP2CQ9Y2E4 1556 aa25.5■■□□□ 1.67
RNF43-206ENST00000582293 CCDC141Q6ZP82 1450 aa25.47■■□□□ 1.67
RNF43-206ENST00000582293 ATP7AQ04656 1500 aa25.45■■□□□ 1.66
RNF43-206ENST00000582293 ATP10AO60312 1499 aa25.45■■□□□ 1.66
RNF43-206ENST00000582293 SPAG9O60271 1321 aaKnown RBP25.44■■□□□ 1.66
RNF43-206ENST00000582293 REREQ9P2R6 1566 aa25.41■■□□□ 1.66
RNF43-206ENST00000582293 C9orf84Q5VXU9 1444 aa25.41■■□□□ 1.66
RNF43-206ENST00000582293 KDM4FA0A1W2PPD8 638 aa25.4■■□□□ 1.66
RNF43-206ENST00000582293 RSPH4AQ5TD94 716 aa25.4■■□□□ 1.66
RNF43-206ENST00000582293 RTEL1-TNFRSF6BF6WH68 1400 aa25.39■■□□□ 1.66
RNF43-206ENST00000582293 ABCC5O15440 1437 aa25.38■■□□□ 1.65
RNF43-206ENST00000582293 DNMT1P26358 1616 aaKnown RBP25.38■■□□□ 1.65
RNF43-206ENST00000582293 MAST1Q9Y2H9 1570 aa25.38■■□□□ 1.65
RNF43-206ENST00000582293 CROCC2H7BZ55 1655 aa25.37■■□□□ 1.65
RNF43-206ENST00000582293 MYT1LQ9UL68 1186 aa25.37■■□□□ 1.65
RNF43-206ENST00000582293 BCORL1Q5H9F3 1711 aa25.35■■□□□ 1.65
RNF43-206ENST00000582293 DAPK1P53355 1430 aa25.35■■□□□ 1.65
RNF43-206ENST00000582293 ADGBQ8N7X0 1667 aa25.34■■□□□ 1.65
RNF43-206ENST00000582293 PLXNC1O60486 1568 aa25.34■■□□□ 1.65
RNF43-206ENST00000582293 SHANK2Q9UPX8 1470 aa25.32■■□□□ 1.64
RNF43-206ENST00000582293 ADAMTSL3P82987 1691 aa25.32■■□□□ 1.64
RNF43-206ENST00000582293 AGLP35573 1532 aa25.32■■□□□ 1.64
RNF43-206ENST00000582293 A2MP01023 1474 aa25.3■■□□□ 1.64
RNF43-206ENST00000582293 RRBP1Q9P2E9 1410 aaKnown RBP25.29■■□□□ 1.64
RNF43-206ENST00000582293 TSPY4P0CV99 314 aa25.29■■□□□ 1.64
RNF43-206ENST00000582293 TSPY10P0CW01 314 aa25.29■■□□□ 1.64
RNF43-206ENST00000582293 FAM50AQ14320 339 aaKnown RBP25.29■■□□□ 1.64
RNF43-206ENST00000582293 ARID4BQ4LE39 1312 aaPredicted RBP25.29■■□□□ 1.64
RNF43-206ENST00000582293 PTPRKQ15262 1439 aa25.27■■□□□ 1.64
RNF43-206ENST00000582293 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.26■■□□□ 1.63
RNF43-206ENST00000582293 MADDQ8WXG6 1647 aa25.23■■□□□ 1.63
RNF43-206ENST00000582293 DHX29Q7Z478 1369 aaKnown RBP25.23■■□□□ 1.63
RNF43-206ENST00000582293 MLECQ14165 292 aa25.21■■□□□ 1.63
RNF43-206ENST00000582293 ADGRL2O95490 1459 aa25.2■■□□□ 1.62
RNF43-206ENST00000582293 CHIC2Q9UKJ5 165 aa25.19■■□□□ 1.62
RNF43-206ENST00000582293 NCOA1Q15788 1441 aa25.17■■□□□ 1.62
RNF43-206ENST00000582293 KIF15Q9NS87 1388 aa25.16■■□□□ 1.62
RNF43-206ENST00000582293 FER1L4A9Z1Z3 1794 aa25.16■■□□□ 1.62
RNF43-206ENST00000582293 RIMS1Q86UR5 1692 aaKnown RBP25.15■■□□□ 1.62
RNF43-206ENST00000582293 DUOX2Q9NRD8 1548 aa25.15■■□□□ 1.62
RNF43-206ENST00000582293 RRP7BPQ9NSQ0 103 aa25.13■■□□□ 1.61
RNF43-206ENST00000582293 PTPRMP28827 1452 aa25.13■■□□□ 1.61
RNF43-206ENST00000582293 ANKRD30AQ9BXX3 1397 aa25.12■■□□□ 1.61
RNF43-206ENST00000582293 EIF2AK4Q9P2K8 1649 aaKnown RBP25.11■■□□□ 1.61
RNF43-206ENST00000582293 KIF3BO15066 747 aa25.09■■□□□ 1.61
RNF43-206ENST00000582293 ITGAEP38570 1179 aa25.08■■□□□ 1.61
RNF43-206ENST00000582293 MROH1Q8NDA8 1641 aa25.08■■□□□ 1.6
RNF43-206ENST00000582293 RNF17Q9BXT8 1623 aaKnown RBP25.08■■□□□ 1.6
RNF43-206ENST00000582293 ROCK1Q13464 1354 aa25.07■■□□□ 1.6
RNF43-206ENST00000582293 ERBINQ96RT1 1412 aa25.07■■□□□ 1.6
RNF43-206ENST00000582293 GGT6Q6P531 493 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 127.4 ms