RNA–Protein interactions for RNA: ENST00000581832.1

SMARCD2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-209ENST00000581832 ZMYM4Q5VZL5 1548 aa19.86■□□□□ 0.77
SMARCD2-209ENST00000581832 CDC42BPAQ5VT25 1732 aa19.85■□□□□ 0.77
SMARCD2-209ENST00000581832 PREX2Q70Z35 1606 aa19.85■□□□□ 0.77
SMARCD2-209ENST00000581832 ARHGAP5Q13017 1502 aa19.84■□□□□ 0.77
SMARCD2-209ENST00000581832 POGZQ7Z3K3 1410 aa19.84■□□□□ 0.77
SMARCD2-209ENST00000581832 VPS8Q8N3P4 1428 aa19.82■□□□□ 0.76
SMARCD2-209ENST00000581832 GPATCH8Q9UKJ3 1502 aaKnown RBP19.81■□□□□ 0.76
SMARCD2-209ENST00000581832 ARHGEF40Q8TER5 1519 aa19.81■□□□□ 0.76
SMARCD2-209ENST00000581832 MAGI2Q86UL8 1455 aa19.79■□□□□ 0.76
SMARCD2-209ENST00000581832 YEATS2Q9ULM3 1422 aa19.79■□□□□ 0.76
SMARCD2-209ENST00000581832 ARHGEF12Q9NZN5 1544 aa19.79■□□□□ 0.76
SMARCD2-209ENST00000581832 MTUS2Q5JR59 1369 aa19.79■□□□□ 0.76
SMARCD2-209ENST00000581832 AFAP1Q8N556 730 aa19.77■□□□□ 0.76
SMARCD2-209ENST00000581832 KDM5CP41229 1560 aa19.77■□□□□ 0.76
SMARCD2-209ENST00000581832 ABCC1P33527 1531 aa19.76■□□□□ 0.75
SMARCD2-209ENST00000581832 EHBP1L1Q8N3D4 1523 aa19.76■□□□□ 0.75
SMARCD2-209ENST00000581832 SIGLEC1Q9BZZ2 1709 aa19.76■□□□□ 0.75
SMARCD2-209ENST00000581832 ZFYVE16Q7Z3T8 1539 aa19.76■□□□□ 0.75
SMARCD2-209ENST00000581832 ZNF518AQ6AHZ1 1483 aa19.75■□□□□ 0.75
SMARCD2-209ENST00000581832 TIAM1Q13009 1591 aa19.74■□□□□ 0.75
SMARCD2-209ENST00000581832 TRAPPC8Q9Y2L5 1435 aa19.74■□□□□ 0.75
SMARCD2-209ENST00000581832 ADAMTSL3P82987 1691 aa19.74■□□□□ 0.75
SMARCD2-209ENST00000581832 SAMD9LQ8IVG5 1584 aa19.74■□□□□ 0.75
SMARCD2-209ENST00000581832 ITSN2Q9NZM3 1697 aa19.73■□□□□ 0.75
SMARCD2-209ENST00000581832 BCORL1Q5H9F3 1711 aa19.72■□□□□ 0.75
SMARCD2-209ENST00000581832 CCNB3Q8WWL7 1395 aa19.71■□□□□ 0.75
SMARCD2-209ENST00000581832 MAP3K1Q13233 1512 aa19.7■□□□□ 0.74
SMARCD2-209ENST00000581832 ATP10AO60312 1499 aa19.69■□□□□ 0.74
SMARCD2-209ENST00000581832 MLH3Q9UHC1 1453 aa19.69■□□□□ 0.74
SMARCD2-209ENST00000581832 CFDP1Q9UEE9 299 aaPredicted RBP19.69■□□□□ 0.74
SMARCD2-209ENST00000581832 KIAA1107Q9UPP5 1409 aa19.68■□□□□ 0.74
SMARCD2-209ENST00000581832 NCOA2Q15596 1464 aa19.67■□□□□ 0.74
SMARCD2-209ENST00000581832 LRRC9Q6ZRR7 1453 aa19.67■□□□□ 0.74
SMARCD2-209ENST00000581832 HECW2Q9P2P5 1572 aa19.67■□□□□ 0.74
SMARCD2-209ENST00000581832 ZNF777Q9ULD5 760 aaPredicted RBP19.67■□□□□ 0.74
SMARCD2-209ENST00000581832 SUPT6HQ7KZ85 1726 aaKnown RBP19.66■□□□□ 0.74
SMARCD2-209ENST00000581832 KANK4Q5T7N3 995 aaPredicted RBP19.66■□□□□ 0.74
SMARCD2-209ENST00000581832 ARID4BQ4LE39 1312 aaPredicted RBP19.66■□□□□ 0.74
SMARCD2-209ENST00000581832 SYCP2Q9BX26 1530 aa19.66■□□□□ 0.74
SMARCD2-209ENST00000581832 KIDINS220Q9ULH0 1771 aa19.65■□□□□ 0.74
SMARCD2-209ENST00000581832 HNRNPMP52272 730 aaKnown RBP eCLIP19.65■□□□□ 0.74
SMARCD2-209ENST00000581832 DIP2CQ9Y2E4 1556 aa19.65■□□□□ 0.74
SMARCD2-209ENST00000581832 ZNF644Q9H582 1327 aaPredicted RBP19.64■□□□□ 0.73
SMARCD2-209ENST00000581832 C9orf84Q5VXU9 1444 aa19.64■□□□□ 0.73
SMARCD2-209ENST00000581832 ABCA6Q8N139 1617 aa19.63■□□□□ 0.73
SMARCD2-209ENST00000581832 MADDQ8WXG6 1647 aa19.63■□□□□ 0.73
SMARCD2-209ENST00000581832 PLEKHH2Q8IVE3 1493 aa19.63■□□□□ 0.73
SMARCD2-209ENST00000581832 PTPRMP28827 1452 aa19.62■□□□□ 0.73
SMARCD2-209ENST00000581832 REREQ9P2R6 1566 aa19.61■□□□□ 0.73
SMARCD2-209ENST00000581832 MBD5Q9P267 1494 aa19.61■□□□□ 0.73
SMARCD2-209ENST00000581832 AGLP35573 1532 aa19.56■□□□□ 0.72
SMARCD2-209ENST00000581832 RIMS1Q86UR5 1692 aaKnown RBP19.56■□□□□ 0.72
SMARCD2-209ENST00000581832 SPAG9O60271 1321 aaKnown RBP19.55■□□□□ 0.72
SMARCD2-209ENST00000581832 MYT1LQ9UL68 1186 aa19.55■□□□□ 0.72
SMARCD2-209ENST00000581832 INO80Q9ULG1 1556 aaPredicted RBP19.55■□□□□ 0.72
SMARCD2-209ENST00000581832 MLECQ14165 292 aa19.54■□□□□ 0.72
SMARCD2-209ENST00000581832 CAMSAP2Q08AD1 1489 aa19.54■□□□□ 0.72
SMARCD2-209ENST00000581832 ATP7AQ04656 1500 aa19.53■□□□□ 0.72
SMARCD2-209ENST00000581832 FER1L4A9Z1Z3 1794 aa19.52■□□□□ 0.71
SMARCD2-209ENST00000581832 RTEL1-TNFRSF6BF6WH68 1400 aa19.49■□□□□ 0.71
SMARCD2-209ENST00000581832 MYOM3Q5VTT5 1437 aa19.49■□□□□ 0.71
SMARCD2-209ENST00000581832 RSPH4AQ5TD94 716 aa19.48■□□□□ 0.71
SMARCD2-209ENST00000581832 MIA2Q96PC5 1412 aa19.48■□□□□ 0.71
SMARCD2-209ENST00000581832 PLXNC1O60486 1568 aa19.48■□□□□ 0.71
SMARCD2-209ENST00000581832 APLP2Q06481 763 aa19.47■□□□□ 0.71
SMARCD2-209ENST00000581832 ARHGEF5Q12774 1597 aa19.47■□□□□ 0.71
SMARCD2-209ENST00000581832 CCDC141Q6ZP82 1450 aa19.47■□□□□ 0.71
SMARCD2-209ENST00000581832 A2MP01023 1474 aa19.45■□□□□ 0.7
SMARCD2-209ENST00000581832 ADGBQ8N7X0 1667 aa19.44■□□□□ 0.7
SMARCD2-209ENST00000581832 CEBPAP49715 358 aaPredicted RBP19.4■□□□□ 0.7
SMARCD2-209ENST00000581832 SETD1BQ9UPS6 1966 aaKnown RBP19.4■□□□□ 0.7
SMARCD2-209ENST00000581832 DHX29Q7Z478 1369 aaKnown RBP19.4■□□□□ 0.7
SMARCD2-209ENST00000581832 LMTK3Q96Q04 1460 aa19.4■□□□□ 0.7
SMARCD2-209ENST00000581832 MAST1Q9Y2H9 1570 aa19.37■□□□□ 0.69
SMARCD2-209ENST00000581832 TSPY4P0CV99 314 aa19.37■□□□□ 0.69
SMARCD2-209ENST00000581832 TSPY10P0CW01 314 aa19.37■□□□□ 0.69
SMARCD2-209ENST00000581832 C3P01024 1663 aa19.36■□□□□ 0.69
SMARCD2-209ENST00000581832 PTPN23Q9H3S7 1636 aa19.36■□□□□ 0.69
SMARCD2-209ENST00000581832 TCOF1Q13428 1488 aaKnown RBP19.36■□□□□ 0.69
SMARCD2-209ENST00000581832 FGD6Q6ZV73 1430 aa19.36■□□□□ 0.69
SMARCD2-209ENST00000581832 PLPPR3Q6T4P5 718 aa19.36■□□□□ 0.69
SMARCD2-209ENST00000581832 CNTLNQ9NXG0 1405 aa19.34■□□□□ 0.69
SMARCD2-209ENST00000581832 MROH2AA6NES4 1674 aa19.33■□□□□ 0.68
SMARCD2-209ENST00000581832 ABCC5O15440 1437 aa19.33■□□□□ 0.68
SMARCD2-209ENST00000581832 GGT6Q6P531 493 aa19.32■□□□□ 0.68
SMARCD2-209ENST00000581832 PPP6R1Q9UPN7 881 aa19.31■□□□□ 0.68
SMARCD2-209ENST00000581832 ZMYM3Q14202 1370 aa19.31■□□□□ 0.68
SMARCD2-209ENST00000581832 CROCC2H7BZ55 1655 aa19.3■□□□□ 0.68
SMARCD2-209ENST00000581832 CLTCQ00610 1675 aaKnown RBP19.3■□□□□ 0.68
SMARCD2-209ENST00000581832 ESF1Q9H501 851 aaKnown RBP19.29■□□□□ 0.68
SMARCD2-209ENST00000581832 PREX1Q8TCU6 1659 aa19.29■□□□□ 0.68
SMARCD2-209ENST00000581832 DNMT1P26358 1616 aaKnown RBP19.29■□□□□ 0.68
SMARCD2-209ENST00000581832 KIF3BO15066 747 aa19.28■□□□□ 0.68
SMARCD2-209ENST00000581832 SHANK2Q9UPX8 1470 aa19.28■□□□□ 0.68
SMARCD2-209ENST00000581832 DAPK1P53355 1430 aa19.27■□□□□ 0.68
SMARCD2-209ENST00000581832 HSPA2P54652 639 aa19.27■□□□□ 0.68
SMARCD2-209ENST00000581832 NPATQ14207 1427 aa19.24■□□□□ 0.67
SMARCD2-209ENST00000581832 RNF17Q9BXT8 1623 aaKnown RBP19.22■□□□□ 0.67
SMARCD2-209ENST00000581832 PTPRKQ15262 1439 aa19.22■□□□□ 0.67
SMARCD2-209ENST00000581832 EIF2AK4Q9P2K8 1649 aaKnown RBP19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms