RNA–Protein interactions for RNA: ENST00000581161.5

RTTN-206, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-206ENST00000581161 RNF17Q9BXT8 1623 aaKnown RBP5.93□□□□□ -1.46
RTTN-206ENST00000581161 ARHGEF5Q12774 1597 aa5.93□□□□□ -1.46
RTTN-206ENST00000581161 PZPP20742 1482 aa5.93□□□□□ -1.46
RTTN-206ENST00000581161 EPRSP07814 1512 aaKnown RBP5.93□□□□□ -1.46
RTTN-206ENST00000581161 FGD6Q6ZV73 1430 aa5.93□□□□□ -1.46
RTTN-206ENST00000581161 FHAD1B1AJZ9 1412 aa5.93□□□□□ -1.46
RTTN-206ENST00000581161 MIA2Q96PC5 1412 aa5.93□□□□□ -1.46
RTTN-206ENST00000581161 MRC2Q9UBG0 1479 aa5.92□□□□□ -1.46
RTTN-206ENST00000581161 ARAP3Q8WWN8 1544 aa5.92□□□□□ -1.46
RTTN-206ENST00000581161 SHANK2Q9UPX8 1470 aa5.92□□□□□ -1.46
RTTN-206ENST00000581161 GRIN2AQ12879 1464 aa5.91□□□□□ -1.46
RTTN-206ENST00000581161 MAGI1Q96QZ7 1491 aaPredicted RBP5.91□□□□□ -1.46
RTTN-206ENST00000581161 PLXNC1O60486 1568 aa5.91□□□□□ -1.46
RTTN-206ENST00000581161 IFT172Q9UG01 1749 aa5.91□□□□□ -1.46
RTTN-206ENST00000581161 SUPT6HQ7KZ85 1726 aaKnown RBP5.91□□□□□ -1.46
RTTN-206ENST00000581161 IFT140Q96RY7 1462 aa5.9□□□□□ -1.46
RTTN-206ENST00000581161 POLR3GLQ9BT43 218 aa5.9□□□□□ -1.46
RTTN-206ENST00000581161 KIF14Q15058 1648 aa5.9□□□□□ -1.46
RTTN-206ENST00000581161 RAPGEF6Q8TEU7 1601 aa5.9□□□□□ -1.46
RTTN-206ENST00000581161 ADGBQ8N7X0 1667 aa5.9□□□□□ -1.47
RTTN-206ENST00000581161 PLA2R1Q13018 1463 aa5.9□□□□□ -1.47
RTTN-206ENST00000581161 ROCK1Q13464 1354 aa5.9□□□□□ -1.47
RTTN-206ENST00000581161 PPRC1Q5VV67 1664 aaKnown RBP5.9□□□□□ -1.47
RTTN-206ENST00000581161 CCNB3Q8WWL7 1395 aa5.89□□□□□ -1.47
RTTN-206ENST00000581161 FKBP8Q14318 412 aa5.89□□□□□ -1.47
RTTN-206ENST00000581161 BCL11AQ9H165 835 aa5.89□□□□□ -1.47
RTTN-206ENST00000581161 CCDC18Q5T9S5 1454 aa5.89□□□□□ -1.47
RTTN-206ENST00000581161 MYOM3Q5VTT5 1437 aa5.89□□□□□ -1.47
RTTN-206ENST00000581161 UHRF1BP1Q6BDS2 1440 aa5.89□□□□□ -1.47
RTTN-206ENST00000581161 ANP32EQ9BTT0 268 aa5.88□□□□□ -1.47
RTTN-206ENST00000581161 PREX2Q70Z35 1606 aa5.88□□□□□ -1.47
RTTN-206ENST00000581161 SYNJ2O15056 1496 aa5.88□□□□□ -1.47
RTTN-206ENST00000581161 TSHZ2Q9NRE2 1034 aa5.88□□□□□ -1.47
RTTN-206ENST00000581161 UACAQ9BZF9 1416 aa5.87□□□□□ -1.47
RTTN-206ENST00000581161 SLC24A1O60721 1099 aa5.87□□□□□ -1.47
RTTN-206ENST00000581161 KDM5CP41229 1560 aa5.87□□□□□ -1.47
RTTN-206ENST00000581161 RPRD2Q5VT52 1461 aaKnown RBP5.86□□□□□ -1.47
RTTN-206ENST00000581161 DUOX2Q9NRD8 1548 aa5.86□□□□□ -1.47
RTTN-206ENST00000581161 ZMYM4Q5VZL5 1548 aa5.86□□□□□ -1.47
RTTN-206ENST00000581161 KRI1Q8N9T8 703 aaKnown RBP5.85□□□□□ -1.47
RTTN-206ENST00000581161 FMN1Q68DA7 1419 aa5.85□□□□□ -1.47
RTTN-206ENST00000581161 UHRF1BP1LA0JNW5 1464 aa5.85□□□□□ -1.47
RTTN-206ENST00000581161 PRDM15P57071 1507 aaPredicted RBP5.85□□□□□ -1.47
RTTN-206ENST00000581161 GPATCH8Q9UKJ3 1502 aaKnown RBP5.85□□□□□ -1.47
RTTN-206ENST00000581161 FHOD3Q2V2M9 1422 aa5.85□□□□□ -1.47
RTTN-206ENST00000581161 DDX10Q13206 875 aaKnown RBP5.85□□□□□ -1.47
RTTN-206ENST00000581161 SAMD9LQ8IVG5 1584 aa5.85□□□□□ -1.47
RTTN-206ENST00000581161 ANP32BQ92688 251 aaKnown RBP5.85□□□□□ -1.47
RTTN-206ENST00000581161 KCNH8Q96L42 1107 aa5.85□□□□□ -1.47
RTTN-206ENST00000581161 IQGAP3Q86VI3 1631 aa5.84□□□□□ -1.47
RTTN-206ENST00000581161 ABCA6Q8N139 1617 aa5.84□□□□□ -1.47
RTTN-206ENST00000581161 FAM50AQ14320 339 aaKnown RBP5.84□□□□□ -1.47
RTTN-206ENST00000581161 ABCA9Q8IUA7 1624 aa5.84□□□□□ -1.47
RTTN-206ENST00000581161 PPP1R15AO75807 674 aaPredicted RBP5.84□□□□□ -1.47
RTTN-206ENST00000581161 INO80Q9ULG1 1556 aaPredicted RBP5.84□□□□□ -1.48
RTTN-206ENST00000581161 RAB3GAP2Q9H2M9 1393 aa5.84□□□□□ -1.48
RTTN-206ENST00000581161 MYOM1P52179 1685 aa5.84□□□□□ -1.48
RTTN-206ENST00000581161 ABCC5O15440 1437 aa5.84□□□□□ -1.48
RTTN-206ENST00000581161 TRIM52Q96A61 297 aa5.83□□□□□ -1.48
RTTN-206ENST00000581161 HIRIP3Q9BW71 556 aaPredicted RBP5.83□□□□□ -1.48
RTTN-206ENST00000581161 ERCC6L2Q5T890 1561 aa5.83□□□□□ -1.48
RTTN-206ENST00000581161 NRXN1Q9ULB1 1477 aa5.83□□□□□ -1.48
RTTN-206ENST00000581161 ANKRD30BQ9BXX2 1392 aa5.82□□□□□ -1.48
RTTN-206ENST00000581161 PIK3C2BO00750 1634 aa5.82□□□□□ -1.48
RTTN-206ENST00000581161 MYO3AQ8NEV4 1616 aa5.82□□□□□ -1.48
RTTN-206ENST00000581161 TRPM1Q7Z4N2 1603 aa5.82□□□□□ -1.48
RTTN-206ENST00000581161 ITSN2Q9NZM3 1697 aa5.82□□□□□ -1.48
RTTN-206ENST00000581161 IQGAP1P46940 1657 aa5.81□□□□□ -1.48
RTTN-206ENST00000581161 CDK13Q14004 1512 aaKnown RBP5.81□□□□□ -1.48
RTTN-206ENST00000581161 GPRASP1Q5JY77 1395 aa5.81□□□□□ -1.48
RTTN-206ENST00000581161 ANP32CO43423 234 aa5.81□□□□□ -1.48
RTTN-206ENST00000581161 GLIPR1L2Q4G1C9 344 aa5.81□□□□□ -1.48
RTTN-206ENST00000581161 TIMELESSQ9UNS1 1208 aa5.81□□□□□ -1.48
RTTN-206ENST00000581161 NCOA1Q15788 1441 aa5.81□□□□□ -1.48
RTTN-206ENST00000581161 FRMPD1Q5SYB0 1578 aa5.8□□□□□ -1.48
RTTN-206ENST00000581161 SIN3AQ96ST3 1273 aa5.8□□□□□ -1.48
RTTN-206ENST00000581161 SETD5Q9C0A6 1442 aa5.8□□□□□ -1.48
RTTN-206ENST00000581161 TTC37Q6PGP7 1564 aa5.8□□□□□ -1.48
RTTN-206ENST00000581161 CHD1O14646 1710 aa5.79□□□□□ -1.48
RTTN-206ENST00000581161 KIAA1210Q9ULL0 1709 aa5.79□□□□□ -1.48
RTTN-206ENST00000581161 DHX29Q7Z478 1369 aaKnown RBP5.79□□□□□ -1.48
RTTN-206ENST00000581161 ATP10BO94823 1461 aa5.79□□□□□ -1.48
RTTN-206ENST00000581161 WDR7Q9Y4E6 1490 aa5.79□□□□□ -1.48
RTTN-206ENST00000581161 IRX6P78412 446 aaPredicted RBP5.79□□□□□ -1.48
RTTN-206ENST00000581161 CEP152O94986 1710 aa5.78□□□□□ -1.48
RTTN-206ENST00000581161 SETD1AO15047 1707 aaKnown RBP5.78□□□□□ -1.48
RTTN-206ENST00000581161 P3H3Q8IVL6 736 aa5.78□□□□□ -1.48
RTTN-206ENST00000581161 LMTK2Q8IWU2 1503 aa5.78□□□□□ -1.48
RTTN-206ENST00000581161 ZC3H13Q5T200 1668 aaKnown RBP5.78□□□□□ -1.48
RTTN-206ENST00000581161 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.78□□□□□ -1.48
RTTN-206ENST00000581161 RNF123Q5XPI4 1314 aa5.78□□□□□ -1.48
RTTN-206ENST00000581161 RBM19Q9Y4C8 960 aaKnown RBP5.77□□□□□ -1.48
RTTN-206ENST00000581161 DAPK1P53355 1430 aa5.77□□□□□ -1.49
RTTN-206ENST00000581161 SIGLEC1Q9BZZ2 1709 aa5.76□□□□□ -1.49
RTTN-206ENST00000581161 TROQ12816 1431 aaPredicted RBP5.76□□□□□ -1.49
RTTN-206ENST00000581161 PTPRTO14522 1441 aa5.76□□□□□ -1.49
RTTN-206ENST00000581161 ABCC1P33527 1531 aa5.75□□□□□ -1.49
RTTN-206ENST00000581161 ABCC2Q92887 1545 aa5.75□□□□□ -1.49
RTTN-206ENST00000581161 EIF2AK4Q9P2K8 1649 aaKnown RBP5.75□□□□□ -1.49
RTTN-206ENST00000581161 SPHKAPQ2M3C7 1700 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms