RNA–Protein interactions for RNA: ENST00000580972.1

RNU4ATAC-201, Transcript of RNA, U4atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU4ATAC, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC-201ENST00000580972 RRP7BPQ9NSQ0 103 aa9.25□□□□□ -0.93
RNU4ATAC-201ENST00000580972 CAMSAP2Q08AD1 1489 aa9.25□□□□□ -0.93
RNU4ATAC-201ENST00000580972 RAB3GAP2Q9H2M9 1393 aa9.24□□□□□ -0.93
RNU4ATAC-201ENST00000580972 DAPK1P53355 1430 aa9.23□□□□□ -0.93
RNU4ATAC-201ENST00000580972 CCER1Q8TC90 406 aaPredicted RBP9.23□□□□□ -0.93
RNU4ATAC-201ENST00000580972 SETD5Q9C0A6 1442 aa9.22□□□□□ -0.93
RNU4ATAC-201ENST00000580972 PLCH2O75038 1416 aa9.21□□□□□ -0.94
RNU4ATAC-201ENST00000580972 ARHGAP5Q13017 1502 aa9.21□□□□□ -0.94
RNU4ATAC-201ENST00000580972 ARHGEF12Q9NZN5 1544 aa9.21□□□□□ -0.94
RNU4ATAC-201ENST00000580972 DHX57Q6P158 1386 aaKnown RBP9.2□□□□□ -0.94
RNU4ATAC-201ENST00000580972 NAIPQ13075 1403 aa9.2□□□□□ -0.94
RNU4ATAC-201ENST00000580972 MBD5Q9P267 1494 aa9.2□□□□□ -0.94
RNU4ATAC-201ENST00000580972 AKNAQ7Z591 1439 aa9.19□□□□□ -0.94
RNU4ATAC-201ENST00000580972 SAMD9LQ8IVG5 1584 aa9.19□□□□□ -0.94
RNU4ATAC-201ENST00000580972 HFM1A2PYH4 1435 aa9.18□□□□□ -0.94
RNU4ATAC-201ENST00000580972 EFCAB2Q5VUJ9 269 aa9.18□□□□□ -0.94
RNU4ATAC-201ENST00000580972 TRAPPC8Q9Y2L5 1435 aa9.18□□□□□ -0.94
RNU4ATAC-201ENST00000580972 SYCP2Q9BX26 1530 aa9.17□□□□□ -0.94
RNU4ATAC-201ENST00000580972 C9orf84Q5VXU9 1444 aa9.16□□□□□ -0.94
RNU4ATAC-201ENST00000580972 KDM6BO15054 1643 aa9.16□□□□□ -0.94
RNU4ATAC-201ENST00000580972 PREX2Q70Z35 1606 aa9.16□□□□□ -0.94
RNU4ATAC-201ENST00000580972 CD109Q6YHK3 1445 aa9.15□□□□□ -0.94
RNU4ATAC-201ENST00000580972 FAM69CQ0P6D2 419 aa9.15□□□□□ -0.94
RNU4ATAC-201ENST00000580972 AFAP1Q8N556 730 aa9.15□□□□□ -0.94
RNU4ATAC-201ENST00000580972 DNMT1P26358 1616 aaKnown RBP9.15□□□□□ -0.94
RNU4ATAC-201ENST00000580972 CDC42BPAQ5VT25 1732 aa9.14□□□□□ -0.95
RNU4ATAC-201ENST00000580972 ROCK1Q13464 1354 aa9.14□□□□□ -0.95
RNU4ATAC-201ENST00000580972 MAPKBP1O60336 1514 aa9.14□□□□□ -0.95
RNU4ATAC-201ENST00000580972 FANCAO15360 1455 aa9.14□□□□□ -0.95
RNU4ATAC-201ENST00000580972 CCDC141Q6ZP82 1450 aa9.14□□□□□ -0.95
RNU4ATAC-201ENST00000580972 NCOA1Q15788 1441 aa9.14□□□□□ -0.95
RNU4ATAC-201ENST00000580972 KIAA1107Q9UPP5 1409 aa9.14□□□□□ -0.95
RNU4ATAC-201ENST00000580972 ITSN2Q9NZM3 1697 aa9.13□□□□□ -0.95
RNU4ATAC-201ENST00000580972 SCAPERQ9BY12 1400 aa9.13□□□□□ -0.95
RNU4ATAC-201ENST00000580972 ABCA9Q8IUA7 1624 aa9.13□□□□□ -0.95
RNU4ATAC-201ENST00000580972 KIF15Q9NS87 1388 aa9.12□□□□□ -0.95
RNU4ATAC-201ENST00000580972 ABCC1P33527 1531 aa9.12□□□□□ -0.95
RNU4ATAC-201ENST00000580972 TSPY4P0CV99 314 aa9.12□□□□□ -0.95
RNU4ATAC-201ENST00000580972 TSPY10P0CW01 314 aa9.12□□□□□ -0.95
RNU4ATAC-201ENST00000580972 TRIM52Q96A61 297 aa9.12□□□□□ -0.95
RNU4ATAC-201ENST00000580972 ADGRL2O95490 1459 aa9.12□□□□□ -0.95
RNU4ATAC-201ENST00000580972 ANKRD30AQ9BXX3 1397 aa9.12□□□□□ -0.95
RNU4ATAC-201ENST00000580972 ADGRL1O94910 1474 aa9.11□□□□□ -0.95
RNU4ATAC-201ENST00000580972 SHANK2Q9UPX8 1470 aa9.11□□□□□ -0.95
RNU4ATAC-201ENST00000580972 DNAJC5Q9H3Z4 198 aa9.11□□□□□ -0.95
RNU4ATAC-201ENST00000580972 CDC42BPBQ9Y5S2 1711 aa9.11□□□□□ -0.95
RNU4ATAC-201ENST00000580972 PLEKHH2Q8IVE3 1493 aa9.1□□□□□ -0.95
RNU4ATAC-201ENST00000580972 RAPGEF3O95398 923 aa9.1□□□□□ -0.95
RNU4ATAC-201ENST00000580972 FOXD1Q16676 465 aa9.1□□□□□ -0.95
RNU4ATAC-201ENST00000580972 ARHGEF5Q12774 1597 aa9.1□□□□□ -0.95
RNU4ATAC-201ENST00000580972 ARAP3Q8WWN8 1544 aa9.1□□□□□ -0.95
RNU4ATAC-201ENST00000580972 DENND4BO75064 1496 aaPredicted RBP9.09□□□□□ -0.95
RNU4ATAC-201ENST00000580972 SPAG9O60271 1321 aaKnown RBP9.09□□□□□ -0.95
RNU4ATAC-201ENST00000580972 SIN3AQ96ST3 1273 aa9.09□□□□□ -0.95
RNU4ATAC-201ENST00000580972 ANKRD50Q9ULJ7 1429 aa9.08□□□□□ -0.96
RNU4ATAC-201ENST00000580972 DIP2BQ9P265 1576 aa9.07□□□□□ -0.96
RNU4ATAC-201ENST00000580972 POGZQ7Z3K3 1410 aa9.07□□□□□ -0.96
RNU4ATAC-201ENST00000580972 RSPH4AQ5TD94 716 aa9.07□□□□□ -0.96
RNU4ATAC-201ENST00000580972 MYO5CQ9NQX4 1742 aa9.07□□□□□ -0.96
RNU4ATAC-201ENST00000580972 ZEB1P37275 1124 aaPredicted RBP9.06□□□□□ -0.96
RNU4ATAC-201ENST00000580972 MPHOSPH9Q99550 1183 aa9.06□□□□□ -0.96
RNU4ATAC-201ENST00000580972 MYT1LQ9UL68 1186 aa9.06□□□□□ -0.96
RNU4ATAC-201ENST00000580972 PZPP20742 1482 aa9.06□□□□□ -0.96
RNU4ATAC-201ENST00000580972 GLI2P10070 1586 aa9.06□□□□□ -0.96
RNU4ATAC-201ENST00000580972 NEUROD1Q13562 356 aa9.05□□□□□ -0.96
RNU4ATAC-201ENST00000580972 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.05□□□□□ -0.96
RNU4ATAC-201ENST00000580972 ZFYVE16Q7Z3T8 1539 aa9.05□□□□□ -0.96
RNU4ATAC-201ENST00000580972 CROCC2H7BZ55 1655 aa9.04□□□□□ -0.96
RNU4ATAC-201ENST00000580972 NEO1Q92859 1461 aa9.04□□□□□ -0.96
RNU4ATAC-201ENST00000580972 GCC2Q8IWJ2 1684 aa9.04□□□□□ -0.96
RNU4ATAC-201ENST00000580972 MAST1Q9Y2H9 1570 aa9.03□□□□□ -0.96
RNU4ATAC-201ENST00000580972 COL17A1Q9UMD9 1497 aaPredicted RBP9.03□□□□□ -0.96
RNU4ATAC-201ENST00000580972 NUP155O75694 1391 aa9.03□□□□□ -0.96
RNU4ATAC-201ENST00000580972 SLC4A1APQ9BWU0 796 aaKnown RBP9.03□□□□□ -0.96
RNU4ATAC-201ENST00000580972 YEATS2Q9ULM3 1422 aa9.03□□□□□ -0.96
RNU4ATAC-201ENST00000580972 MAP3K4Q9Y6R4 1608 aa9.02□□□□□ -0.96
RNU4ATAC-201ENST00000580972 PKD2Q13563 968 aa9.02□□□□□ -0.97
RNU4ATAC-201ENST00000580972 RTEL1-TNFRSF6BF6WH68 1400 aa9.02□□□□□ -0.97
RNU4ATAC-201ENST00000580972 ATP7AQ04656 1500 aa9.01□□□□□ -0.97
RNU4ATAC-201ENST00000580972 TRHP20396 242 aaPredicted RBP9.01□□□□□ -0.97
RNU4ATAC-201ENST00000580972 ZNF518AQ6AHZ1 1483 aa9.01□□□□□ -0.97
RNU4ATAC-201ENST00000580972 CLSPNQ9HAW4 1339 aa9.01□□□□□ -0.97
RNU4ATAC-201ENST00000580972 DUOX2Q9NRD8 1548 aa9□□□□□ -0.97
RNU4ATAC-201ENST00000580972 DHX29Q7Z478 1369 aaKnown RBP8.99□□□□□ -0.97
RNU4ATAC-201ENST00000580972 PLXNC1O60486 1568 aa8.99□□□□□ -0.97
RNU4ATAC-201ENST00000580972 FRMPD1Q5SYB0 1578 aa8.99□□□□□ -0.97
RNU4ATAC-201ENST00000580972 INO80Q9ULG1 1556 aaPredicted RBP8.99□□□□□ -0.97
RNU4ATAC-201ENST00000580972 ERBINQ96RT1 1412 aa8.99□□□□□ -0.97
RNU4ATAC-201ENST00000580972 KIF3BO15066 747 aa8.99□□□□□ -0.97
RNU4ATAC-201ENST00000580972 ADGBQ8N7X0 1667 aa8.99□□□□□ -0.97
RNU4ATAC-201ENST00000580972 KDM5CP41229 1560 aa8.99□□□□□ -0.97
RNU4ATAC-201ENST00000580972 ANKRD30BQ9BXX2 1392 aa8.99□□□□□ -0.97
RNU4ATAC-201ENST00000580972 PPRC1Q5VV67 1664 aaKnown RBP8.98□□□□□ -0.97
RNU4ATAC-201ENST00000580972 MLH3Q9UHC1 1453 aa8.98□□□□□ -0.97
RNU4ATAC-201ENST00000580972 A2MP01023 1474 aa8.97□□□□□ -0.97
RNU4ATAC-201ENST00000580972 TEX14Q8IWB6 1497 aa8.96□□□□□ -0.97
RNU4ATAC-201ENST00000580972 KDM5DQ9BY66 1539 aa8.96□□□□□ -0.97
RNU4ATAC-201ENST00000580972 CFAP74Q9C0B2 1584 aa8.96□□□□□ -0.97
RNU4ATAC-201ENST00000580972 FAM135AQ9P2D6 1515 aa8.95□□□□□ -0.98
RNU4ATAC-201ENST00000580972 PLA2R1Q13018 1463 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms