RNA–Protein interactions for RNA: ENST00000580879.5

NUP85-215, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-215ENST00000580879 PREX2Q70Z35 1606 aa21■□□□□ 0.95
NUP85-215ENST00000580879 EHBP1L1Q8N3D4 1523 aa21■□□□□ 0.95
NUP85-215ENST00000580879 KDM4FA0A1W2PPD8 638 aa21■□□□□ 0.95
NUP85-215ENST00000580879 AEBP2Q6ZN18 517 aaPredicted RBP21■□□□□ 0.95
NUP85-215ENST00000580879 RICTORQ6R327 1708 aa20.99■□□□□ 0.95
NUP85-215ENST00000580879 TIAM1Q13009 1591 aa20.99■□□□□ 0.95
NUP85-215ENST00000580879 CDC42BPAQ5VT25 1732 aa20.98■□□□□ 0.95
NUP85-215ENST00000580879 GPATCH8Q9UKJ3 1502 aaKnown RBP20.98■□□□□ 0.95
NUP85-215ENST00000580879 CCNB3Q8WWL7 1395 aa20.97■□□□□ 0.95
NUP85-215ENST00000580879 POGZQ7Z3K3 1410 aa20.97■□□□□ 0.95
NUP85-215ENST00000580879 ZNF777Q9ULD5 760 aaPredicted RBP20.97■□□□□ 0.95
NUP85-215ENST00000580879 KANK4Q5T7N3 995 aaPredicted RBP20.93■□□□□ 0.94
NUP85-215ENST00000580879 CFDP1Q9UEE9 299 aaPredicted RBP20.93■□□□□ 0.94
NUP85-215ENST00000580879 AFAP1Q8N556 730 aa20.92■□□□□ 0.94
NUP85-215ENST00000580879 YEATS2Q9ULM3 1422 aa20.92■□□□□ 0.94
NUP85-215ENST00000580879 LRRC9Q6ZRR7 1453 aa20.92■□□□□ 0.94
NUP85-215ENST00000580879 ZMYM4Q5VZL5 1548 aa20.92■□□□□ 0.94
NUP85-215ENST00000580879 ABCC1P33527 1531 aa20.91■□□□□ 0.94
NUP85-215ENST00000580879 NCOA2Q15596 1464 aa20.91■□□□□ 0.94
NUP85-215ENST00000580879 ARHGEF12Q9NZN5 1544 aa20.91■□□□□ 0.94
NUP85-215ENST00000580879 ARHGEF40Q8TER5 1519 aa20.9■□□□□ 0.94
NUP85-215ENST00000580879 ZFYVE16Q7Z3T8 1539 aa20.89■□□□□ 0.94
NUP85-215ENST00000580879 ZNF518AQ6AHZ1 1483 aa20.89■□□□□ 0.94
NUP85-215ENST00000580879 TRAPPC8Q9Y2L5 1435 aa20.89■□□□□ 0.94
NUP85-215ENST00000580879 SAMD9LQ8IVG5 1584 aa20.89■□□□□ 0.93
NUP85-215ENST00000580879 SUPT6HQ7KZ85 1726 aaKnown RBP20.88■□□□□ 0.93
NUP85-215ENST00000580879 MAP3K1Q13233 1512 aa20.88■□□□□ 0.93
NUP85-215ENST00000580879 ARID4BQ4LE39 1312 aaPredicted RBP20.87■□□□□ 0.93
NUP85-215ENST00000580879 APLP2Q06481 763 aa20.87■□□□□ 0.93
NUP85-215ENST00000580879 MYT1LQ9UL68 1186 aa20.87■□□□□ 0.93
NUP85-215ENST00000580879 ZNF644Q9H582 1327 aaPredicted RBP20.86■□□□□ 0.93
NUP85-215ENST00000580879 HNRNPMP52272 730 aaKnown RBP eCLIP20.86■□□□□ 0.938e-10■■■■■ 34.4
NUP85-215ENST00000580879 MAGI2Q86UL8 1455 aa20.86■□□□□ 0.93
NUP85-215ENST00000580879 ITSN2Q9NZM3 1697 aa20.86■□□□□ 0.93
NUP85-215ENST00000580879 SYCP2Q9BX26 1530 aa20.85■□□□□ 0.93
NUP85-215ENST00000580879 KDM5CP41229 1560 aa20.85■□□□□ 0.93
NUP85-215ENST00000580879 PLEKHH2Q8IVE3 1493 aa20.8■□□□□ 0.92
NUP85-215ENST00000580879 HECW2Q9P2P5 1572 aa20.8■□□□□ 0.92
NUP85-215ENST00000580879 KIAA1107Q9UPP5 1409 aa20.79■□□□□ 0.92
NUP85-215ENST00000580879 ATP10AO60312 1499 aa20.79■□□□□ 0.92
NUP85-215ENST00000580879 SIGLEC1Q9BZZ2 1709 aa20.78■□□□□ 0.92
NUP85-215ENST00000580879 MLH3Q9UHC1 1453 aa20.78■□□□□ 0.92
NUP85-215ENST00000580879 C9orf84Q5VXU9 1444 aa20.77■□□□□ 0.91
NUP85-215ENST00000580879 DIP2CQ9Y2E4 1556 aa20.76■□□□□ 0.91
NUP85-215ENST00000580879 SPAG9O60271 1321 aaKnown RBP20.76■□□□□ 0.91
NUP85-215ENST00000580879 MLECQ14165 292 aa20.75■□□□□ 0.91
NUP85-215ENST00000580879 CAMSAP2Q08AD1 1489 aa20.75■□□□□ 0.91
NUP85-215ENST00000580879 ABCA6Q8N139 1617 aa20.75■□□□□ 0.91
NUP85-215ENST00000580879 BCORL1Q5H9F3 1711 aa20.74■□□□□ 0.91
NUP85-215ENST00000580879 MBD5Q9P267 1494 aa20.74■□□□□ 0.91
NUP85-215ENST00000580879 KIDINS220Q9ULH0 1771 aa20.72■□□□□ 0.91
NUP85-215ENST00000580879 MYOM3Q5VTT5 1437 aa20.72■□□□□ 0.91
NUP85-215ENST00000580879 ADAMTSL3P82987 1691 aa20.72■□□□□ 0.91
NUP85-215ENST00000580879 MADDQ8WXG6 1647 aa20.69■□□□□ 0.9
NUP85-215ENST00000580879 ATP7AQ04656 1500 aa20.68■□□□□ 0.9
NUP85-215ENST00000580879 INO80Q9ULG1 1556 aaPredicted RBP20.68■□□□□ 0.9
NUP85-215ENST00000580879 MIA2Q96PC5 1412 aa20.66■□□□□ 0.9
NUP85-215ENST00000580879 CCDC141Q6ZP82 1450 aa20.66■□□□□ 0.9
NUP85-215ENST00000580879 PTPRMP28827 1452 aa20.65■□□□□ 0.9
NUP85-215ENST00000580879 REREQ9P2R6 1566 aa20.64■□□□□ 0.9
NUP85-215ENST00000580879 PLPPR3Q6T4P5 718 aa20.63■□□□□ 0.89
NUP85-215ENST00000580879 PPARGC1BQ86YN6 1023 aaKnown RBP20.63■□□□□ 0.89
NUP85-215ENST00000580879 RIMS1Q86UR5 1692 aaKnown RBP20.63■□□□□ 0.89
NUP85-215ENST00000580879 ARHGEF5Q12774 1597 aa20.61■□□□□ 0.89
NUP85-215ENST00000580879 RSPH4AQ5TD94 716 aa20.61■□□□□ 0.89
NUP85-215ENST00000580879 AGLP35573 1532 aa20.6■□□□□ 0.89
NUP85-215ENST00000580879 A2MP01023 1474 aa20.6■□□□□ 0.89
NUP85-215ENST00000580879 RTEL1-TNFRSF6BF6WH68 1400 aa20.6■□□□□ 0.89
NUP85-215ENST00000580879 FGD6Q6ZV73 1430 aa20.6■□□□□ 0.89
NUP85-215ENST00000580879 PTPN23Q9H3S7 1636 aa20.58■□□□□ 0.89
NUP85-215ENST00000580879 TSPY4P0CV99 314 aa20.58■□□□□ 0.89
NUP85-215ENST00000580879 TSPY10P0CW01 314 aa20.58■□□□□ 0.89
NUP85-215ENST00000580879 FER1L4A9Z1Z3 1794 aa20.57■□□□□ 0.88
NUP85-215ENST00000580879 PLXNC1O60486 1568 aa20.55■□□□□ 0.88
NUP85-215ENST00000580879 TCOF1Q13428 1488 aaKnown RBP20.53■□□□□ 0.88
NUP85-215ENST00000580879 ADGBQ8N7X0 1667 aa20.53■□□□□ 0.88
NUP85-215ENST00000580879 DHX29Q7Z478 1369 aaKnown RBP20.52■□□□□ 0.88
NUP85-215ENST00000580879 CEBPAP49715 358 aaPredicted RBP20.52■□□□□ 0.88
NUP85-215ENST00000580879 ABCC5O15440 1437 aa20.52■□□□□ 0.87
NUP85-215ENST00000580879 FAM50AQ14320 339 aaKnown RBP20.51■□□□□ 0.87
NUP85-215ENST00000580879 ESF1Q9H501 851 aaKnown RBP20.51■□□□□ 0.87
NUP85-215ENST00000580879 GGT6Q6P531 493 aa20.5■□□□□ 0.87
NUP85-215ENST00000580879 MAST1Q9Y2H9 1570 aa20.5■□□□□ 0.87
NUP85-215ENST00000580879 DAPK1P53355 1430 aa20.48■□□□□ 0.87
NUP85-215ENST00000580879 KIF3BO15066 747 aa20.47■□□□□ 0.87
NUP85-215ENST00000580879 DNMT1P26358 1616 aaKnown RBP20.46■□□□□ 0.87
NUP85-215ENST00000580879 CHIC2Q9UKJ5 165 aa20.46■□□□□ 0.87
NUP85-215ENST00000580879 CROCC2H7BZ55 1655 aa20.45■□□□□ 0.86
NUP85-215ENST00000580879 SHANK2Q9UPX8 1470 aa20.44■□□□□ 0.86
NUP85-215ENST00000580879 RRP7BPQ9NSQ0 103 aa20.43■□□□□ 0.86
NUP85-215ENST00000580879 CNTLNQ9NXG0 1405 aa20.43■□□□□ 0.86
NUP85-215ENST00000580879 KIF15Q9NS87 1388 aa20.41■□□□□ 0.86
NUP85-215ENST00000580879 C3P01024 1663 aa20.39■□□□□ 0.86
NUP85-215ENST00000580879 CLTCQ00610 1675 aaKnown RBP20.39■□□□□ 0.86
NUP85-215ENST00000580879 LMTK3Q96Q04 1460 aa20.38■□□□□ 0.85
NUP85-215ENST00000580879 ZMYM3Q14202 1370 aa20.38■□□□□ 0.85
NUP85-215ENST00000580879 DUOX2Q9NRD8 1548 aa20.37■□□□□ 0.85
NUP85-215ENST00000580879 ANKRD30AQ9BXX3 1397 aa20.36■□□□□ 0.85
NUP85-215ENST00000580879 HSPA2P54652 639 aa20.36■□□□□ 0.85
NUP85-215ENST00000580879 PPP6R1Q9UPN7 881 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms