RNA–Protein interactions for RNA: ENST00000580573.1

KPNB1-210, Transcript of karyopherin subunit beta 1, humanhuman

TSL 3

Gene KPNB1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-210ENST00000580573 TCOF1Q13428 1488 aaKnown RBP12.24□□□□□ -0.45
KPNB1-210ENST00000580573 CCNB3Q8WWL7 1395 aa12.24□□□□□ -0.45
KPNB1-210ENST00000580573 ATP1B4Q9UN42 357 aaPredicted RBP12.24□□□□□ -0.45
KPNB1-210ENST00000580573 MIA2Q96PC5 1412 aa12.23□□□□□ -0.45
KPNB1-210ENST00000580573 PTPN23Q9H3S7 1636 aa12.22□□□□□ -0.45
KPNB1-210ENST00000580573 CDK11AQ9UQ88 783 aaPredicted RBP12.22□□□□□ -0.45
KPNB1-210ENST00000580573 PREX2Q70Z35 1606 aa12.22□□□□□ -0.45
KPNB1-210ENST00000580573 TTBK1Q5TCY1 1321 aaPredicted RBP12.21□□□□□ -0.45
KPNB1-210ENST00000580573 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.2□□□□□ -0.46
KPNB1-210ENST00000580573 HNRNPUL2Q1KMD3 747 aaKnown RBP12.2□□□□□ -0.46
KPNB1-210ENST00000580573 CDC42BPBQ9Y5S2 1711 aa12.2□□□□□ -0.46
KPNB1-210ENST00000580573 TTC37Q6PGP7 1564 aa12.19□□□□□ -0.46
KPNB1-210ENST00000580573 MYO5CQ9NQX4 1742 aa12.19□□□□□ -0.46
KPNB1-210ENST00000580573 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.18□□□□□ -0.46
KPNB1-210ENST00000580573 GPATCH8Q9UKJ3 1502 aaKnown RBP12.18□□□□□ -0.46
KPNB1-210ENST00000580573 ARAP3Q8WWN8 1544 aa12.17□□□□□ -0.46
KPNB1-210ENST00000580573 U3KPZ7 1027 aaPredicted RBP12.17□□□□□ -0.46
KPNB1-210ENST00000580573 ABCA9Q8IUA7 1624 aa12.17□□□□□ -0.46
KPNB1-210ENST00000580573 MAPKBP1O60336 1514 aa12.16□□□□□ -0.46
KPNB1-210ENST00000580573 WDR7Q9Y4E6 1490 aa12.16□□□□□ -0.46
KPNB1-210ENST00000580573 DNMT1P26358 1616 aaKnown RBP12.16□□□□□ -0.46
KPNB1-210ENST00000580573 SAMD1Q6SPF0 538 aaPredicted RBP12.16□□□□□ -0.46
KPNB1-210ENST00000580573 CROCC2H7BZ55 1655 aa12.16□□□□□ -0.46
KPNB1-210ENST00000580573 PLEKHD1A6NEE1 506 aa12.15□□□□□ -0.46
KPNB1-210ENST00000580573 ARID3CA6NKF2 412 aa12.15□□□□□ -0.46
KPNB1-210ENST00000580573 CAMSAP2Q08AD1 1489 aa12.12□□□□□ -0.47
KPNB1-210ENST00000580573 GCC2Q8IWJ2 1684 aa12.11□□□□□ -0.47
KPNB1-210ENST00000580573 ARHGEF5Q12774 1597 aa12.11□□□□□ -0.47
KPNB1-210ENST00000580573 SAMD9LQ8IVG5 1584 aa12.11□□□□□ -0.47
KPNB1-210ENST00000580573 ASXL2Q76L83 1435 aa12.11□□□□□ -0.47
KPNB1-210ENST00000580573 AKNAQ7Z591 1439 aa12.11□□□□□ -0.47
KPNB1-210ENST00000580573 ADGBQ8N7X0 1667 aa12.1□□□□□ -0.47
KPNB1-210ENST00000580573 PTPRKQ15262 1439 aa12.09□□□□□ -0.47
KPNB1-210ENST00000580573 GLI2P10070 1586 aa12.08□□□□□ -0.48
KPNB1-210ENST00000580573 PLCH2O75038 1416 aa12.07□□□□□ -0.48
KPNB1-210ENST00000580573 SHANK2Q9UPX8 1470 aa12.07□□□□□ -0.48
KPNB1-210ENST00000580573 DAPK1P53355 1430 aa12.06□□□□□ -0.48
KPNB1-210ENST00000580573 MAP3K4Q9Y6R4 1608 aa12.06□□□□□ -0.48
KPNB1-210ENST00000580573 ADGRL2O95490 1459 aa12.06□□□□□ -0.48
KPNB1-210ENST00000580573 ABCC1P33527 1531 aa12.06□□□□□ -0.48
KPNB1-210ENST00000580573 MAST1Q9Y2H9 1570 aa12.05□□□□□ -0.48
KPNB1-210ENST00000580573 HFM1A2PYH4 1435 aa12.05□□□□□ -0.48
KPNB1-210ENST00000580573 ABCC5O15440 1437 aa12.05□□□□□ -0.48
KPNB1-210ENST00000580573 MBD5Q9P267 1494 aa12.05□□□□□ -0.48
KPNB1-210ENST00000580573 KIAA1107Q9UPP5 1409 aa12.04□□□□□ -0.48
KPNB1-210ENST00000580573 PLEKHH2Q8IVE3 1493 aa12.04□□□□□ -0.48
KPNB1-210ENST00000580573 ARHGAP5Q13017 1502 aa12.04□□□□□ -0.48
KPNB1-210ENST00000580573 CFAP74Q9C0B2 1584 aa12.04□□□□□ -0.48
KPNB1-210ENST00000580573 ROCK1Q13464 1354 aa12.04□□□□□ -0.48
KPNB1-210ENST00000580573 FAM50AQ14320 339 aaKnown RBP12.03□□□□□ -0.48
KPNB1-210ENST00000580573 CFDP1Q9UEE9 299 aaPredicted RBP12.03□□□□□ -0.48
KPNB1-210ENST00000580573 DIP2BQ9P265 1576 aa12.03□□□□□ -0.48
KPNB1-210ENST00000580573 SYCP2Q9BX26 1530 aa12.01□□□□□ -0.49
KPNB1-210ENST00000580573 NAIPQ13075 1403 aa12.01□□□□□ -0.49
KPNB1-210ENST00000580573 SETD5Q9C0A6 1442 aa12.01□□□□□ -0.49
KPNB1-210ENST00000580573 CCDC141Q6ZP82 1450 aa12.01□□□□□ -0.49
KPNB1-210ENST00000580573 PLXNC1O60486 1568 aa12.01□□□□□ -0.49
KPNB1-210ENST00000580573 KIF13AQ9H1H9 1805 aa12□□□□□ -0.49
KPNB1-210ENST00000580573 HRCP23327 699 aa12□□□□□ -0.49
KPNB1-210ENST00000580573 ATF5Q9Y2D1 282 aaPredicted RBP12□□□□□ -0.49
KPNB1-210ENST00000580573 ZNF644Q9H582 1327 aaPredicted RBP12□□□□□ -0.49
KPNB1-210ENST00000580573 ARHGEF12Q9NZN5 1544 aa12□□□□□ -0.49
KPNB1-210ENST00000580573 NPM1P06748 294 aaKnown RBP eCLIP11.99□□□□□ -0.49
KPNB1-210ENST00000580573 CYB5RLQ6IPT4 315 aa11.99□□□□□ -0.49
KPNB1-210ENST00000580573 PPRC1Q5VV67 1664 aaKnown RBP11.98□□□□□ -0.49
KPNB1-210ENST00000580573 POTEDQ86YR6 584 aa11.98□□□□□ -0.49
KPNB1-210ENST00000580573 FANCAO15360 1455 aa11.97□□□□□ -0.49
KPNB1-210ENST00000580573 RAB3GAP2Q9H2M9 1393 aa11.97□□□□□ -0.49
KPNB1-210ENST00000580573 INO80Q9ULG1 1556 aaPredicted RBP11.96□□□□□ -0.49
KPNB1-210ENST00000580573 NCOA1Q15788 1441 aa11.96□□□□□ -0.49
KPNB1-210ENST00000580573 KDM6BO15054 1643 aa11.96□□□□□ -0.5
KPNB1-210ENST00000580573 C9orf84Q5VXU9 1444 aa11.95□□□□□ -0.5
KPNB1-210ENST00000580573 RSPH4AQ5TD94 716 aa11.95□□□□□ -0.5
KPNB1-210ENST00000580573 KCNH8Q96L42 1107 aa11.95□□□□□ -0.5
KPNB1-210ENST00000580573 NEO1Q92859 1461 aa11.95□□□□□ -0.5
KPNB1-210ENST00000580573 KDM5CP41229 1560 aa11.94□□□□□ -0.5
KPNB1-210ENST00000580573 EFCAB2Q5VUJ9 269 aa11.94□□□□□ -0.5
KPNB1-210ENST00000580573 ZFYVE16Q7Z3T8 1539 aa11.94□□□□□ -0.5
KPNB1-210ENST00000580573 CD109Q6YHK3 1445 aa11.94□□□□□ -0.5
KPNB1-210ENST00000580573 DHX57Q6P158 1386 aaKnown RBP11.93□□□□□ -0.5
KPNB1-210ENST00000580573 ITGAEP38570 1179 aa11.93□□□□□ -0.5
KPNB1-210ENST00000580573 RICTORQ6R327 1708 aa11.92□□□□□ -0.5
KPNB1-210ENST00000580573 ADGRL1O94910 1474 aa11.92□□□□□ -0.5
KPNB1-210ENST00000580573 CLSPNQ9HAW4 1339 aa11.91□□□□□ -0.5
KPNB1-210ENST00000580573 RTEL1-TNFRSF6BF6WH68 1400 aa11.91□□□□□ -0.5
KPNB1-210ENST00000580573 ANKRD30AQ9BXX3 1397 aa11.91□□□□□ -0.5
KPNB1-210ENST00000580573 KIDINS220Q9ULH0 1771 aa11.9□□□□□ -0.5
KPNB1-210ENST00000580573 TRAPPC8Q9Y2L5 1435 aa11.9□□□□□ -0.5
KPNB1-210ENST00000580573 KDM5DQ9BY66 1539 aa11.9□□□□□ -0.5
KPNB1-210ENST00000580573 ACIN1Q9UKV3 1341 aaKnown RBP11.89□□□□□ -0.51
KPNB1-210ENST00000580573 UNC13BO14795 1591 aa11.89□□□□□ -0.51
KPNB1-210ENST00000580573 ZNF777Q9ULD5 760 aaPredicted RBP11.89□□□□□ -0.51
KPNB1-210ENST00000580573 ATP7AQ04656 1500 aa11.89□□□□□ -0.51
KPNB1-210ENST00000580573 ZNF518AQ6AHZ1 1483 aa11.89□□□□□ -0.51
KPNB1-210ENST00000580573 POGZQ7Z3K3 1410 aa11.88□□□□□ -0.51
KPNB1-210ENST00000580573 DUOX2Q9NRD8 1548 aa11.88□□□□□ -0.51
KPNB1-210ENST00000580573 HNRNPMP52272 730 aaKnown RBP eCLIP11.88□□□□□ -0.51
KPNB1-210ENST00000580573 BCORL1Q5H9F3 1711 aa11.88□□□□□ -0.51
KPNB1-210ENST00000580573 FRMPD1Q5SYB0 1578 aa11.88□□□□□ -0.51
KPNB1-210ENST00000580573 DEPDC5O75140 1603 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms