RNA–Protein interactions for RNA: ENST00000580556.5

CCDC84-209, Transcript of coiled-coil domain containing 84, humanhuman

TSL 3

Gene CCDC84, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-209ENST00000580556 POGZQ7Z3K3 1410 aa19.35■□□□□ 0.69
CCDC84-209ENST00000580556 DISP3Q9P2K9 1392 aa19.35■□□□□ 0.69
CCDC84-209ENST00000580556 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.35■□□□□ 0.69
CCDC84-209ENST00000580556 ZMYM4Q5VZL5 1548 aa19.34■□□□□ 0.69
CCDC84-209ENST00000580556 FER1L4A9Z1Z3 1794 aa19.34■□□□□ 0.69
CCDC84-209ENST00000580556 TTC37Q6PGP7 1564 aa19.33■□□□□ 0.69
CCDC84-209ENST00000580556 PLEKHD1A6NEE1 506 aa19.33■□□□□ 0.68
CCDC84-209ENST00000580556 HECW1Q76N89 1606 aa19.32■□□□□ 0.68
CCDC84-209ENST00000580556 CFAP74Q9C0B2 1584 aa19.31■□□□□ 0.68
CCDC84-209ENST00000580556 SOCS7O14512 581 aa19.3■□□□□ 0.68
CCDC84-209ENST00000580556 CEBPAP49715 358 aaPredicted RBP19.3■□□□□ 0.68
CCDC84-209ENST00000580556 VPS8Q8N3P4 1428 aa19.29■□□□□ 0.68
CCDC84-209ENST00000580556 CASKIN1Q8WXD9 1431 aa19.29■□□□□ 0.68
CCDC84-209ENST00000580556 FYCO1Q9BQS8 1478 aa19.28■□□□□ 0.68
CCDC84-209ENST00000580556 STRCQ7RTU9 1775 aa19.26■□□□□ 0.67
CCDC84-209ENST00000580556 PREX1Q8TCU6 1659 aa19.25■□□□□ 0.67
CCDC84-209ENST00000580556 MAGI2Q86UL8 1455 aa19.25■□□□□ 0.67
CCDC84-209ENST00000580556 ARHGEF12Q9NZN5 1544 aa19.25■□□□□ 0.67
CCDC84-209ENST00000580556 SCAPERQ9BY12 1400 aa19.25■□□□□ 0.67
CCDC84-209ENST00000580556 CDK13Q14004 1512 aaKnown RBP19.21■□□□□ 0.67
CCDC84-209ENST00000580556 ATP10AO60312 1499 aa19.21■□□□□ 0.67
CCDC84-209ENST00000580556 PLCH2O75038 1416 aa19.19■□□□□ 0.66
CCDC84-209ENST00000580556 C9orf84Q5VXU9 1444 aa19.19■□□□□ 0.66
CCDC84-209ENST00000580556 CCDC18Q5T9S5 1454 aa19.19■□□□□ 0.66
CCDC84-209ENST00000580556 SPATA31D1Q6ZQQ2 1576 aa19.17■□□□□ 0.66
CCDC84-209ENST00000580556 DMRT2Q9Y5R5 561 aa19.15■□□□□ 0.66
CCDC84-209ENST00000580556 LRRIQ1Q96JM4 1722 aa19.14■□□□□ 0.66
CCDC84-209ENST00000580556 UHRF1BP1Q6BDS2 1440 aa19.14■□□□□ 0.65
CCDC84-209ENST00000580556 MAP3K1Q13233 1512 aa19.13■□□□□ 0.65
CCDC84-209ENST00000580556 AFAP1Q8N556 730 aa19.11■□□□□ 0.65
CCDC84-209ENST00000580556 EFCAB2Q5VUJ9 269 aa19.1■□□□□ 0.65
CCDC84-209ENST00000580556 MYO5CQ9NQX4 1742 aa19.1■□□□□ 0.65
CCDC84-209ENST00000580556 LTBP4Q8N2S1 1624 aa19.09■□□□□ 0.65
CCDC84-209ENST00000580556 SETD1BQ9UPS6 1966 aaKnown RBP19.09■□□□□ 0.65
CCDC84-209ENST00000580556 KIF14Q15058 1648 aa19.08■□□□□ 0.65
CCDC84-209ENST00000580556 TIAM1Q13009 1591 aa19.08■□□□□ 0.65
CCDC84-209ENST00000580556 ATP1B4Q9UN42 357 aaPredicted RBP19.08■□□□□ 0.64
CCDC84-209ENST00000580556 PTPRTO14522 1441 aa19.08■□□□□ 0.64
CCDC84-209ENST00000580556 C3P01024 1663 aa19.08■□□□□ 0.64
CCDC84-209ENST00000580556 DIP2CQ9Y2E4 1556 aa19.06■□□□□ 0.64
CCDC84-209ENST00000580556 MYT1LQ9UL68 1186 aa19.06■□□□□ 0.64
CCDC84-209ENST00000580556 ZNF518AQ6AHZ1 1483 aa19.05■□□□□ 0.64
CCDC84-209ENST00000580556 CDK11AQ9UQ88 783 aaPredicted RBP19.05■□□□□ 0.64
CCDC84-209ENST00000580556 KDM5CP41229 1560 aa19.05■□□□□ 0.64
CCDC84-209ENST00000580556 ABCA6Q8N139 1617 aa19.03■□□□□ 0.64
CCDC84-209ENST00000580556 TROQ12816 1431 aaPredicted RBP19.02■□□□□ 0.64
CCDC84-209ENST00000580556 ARHGAP5Q13017 1502 aa19.02■□□□□ 0.64
CCDC84-209ENST00000580556 EHBP1L1Q8N3D4 1523 aa19■□□□□ 0.63
CCDC84-209ENST00000580556 APLP2Q06481 763 aa18.99■□□□□ 0.63
CCDC84-209ENST00000580556 NCOA1Q15788 1441 aa18.99■□□□□ 0.63
CCDC84-209ENST00000580556 REREQ9P2R6 1566 aa18.98■□□□□ 0.63
CCDC84-209ENST00000580556 LRRC9Q6ZRR7 1453 aa18.98■□□□□ 0.63
CCDC84-209ENST00000580556 TRAPPC8Q9Y2L5 1435 aa18.98■□□□□ 0.63
CCDC84-209ENST00000580556 MTUS2Q5JR59 1369 aa18.96■□□□□ 0.63
CCDC84-209ENST00000580556 CDC42BPBQ9Y5S2 1711 aa18.96■□□□□ 0.63
CCDC84-209ENST00000580556 IQSEC2Q5JU85 1478 aa18.96■□□□□ 0.63
CCDC84-209ENST00000580556 ESF1Q9H501 851 aaKnown RBP18.95■□□□□ 0.62
CCDC84-209ENST00000580556 MLH3Q9UHC1 1453 aa18.95■□□□□ 0.62
CCDC84-209ENST00000580556 CAMSAP1Q5T5Y3 1602 aa18.94■□□□□ 0.62
CCDC84-209ENST00000580556 AGLP35573 1532 aa18.94■□□□□ 0.62
CCDC84-209ENST00000580556 ZNF335Q9H4Z2 1342 aaPredicted RBP18.93■□□□□ 0.62
CCDC84-209ENST00000580556 NCKAP5LQ9HCH0 1330 aa18.93■□□□□ 0.62
CCDC84-209ENST00000580556 KIDINS220Q9ULH0 1771 aa18.91■□□□□ 0.62
CCDC84-209ENST00000580556 UBAP1LF5GYI3 381 aa18.9■□□□□ 0.62
CCDC84-209ENST00000580556 ABCC1P33527 1531 aa18.9■□□□□ 0.62
CCDC84-209ENST00000580556 ITSN2Q9NZM3 1697 aa18.89■□□□□ 0.61
CCDC84-209ENST00000580556 SUPT6HQ7KZ85 1726 aaKnown RBP18.89■□□□□ 0.61
CCDC84-209ENST00000580556 KANK4Q5T7N3 995 aaPredicted RBP18.88■□□□□ 0.61
CCDC84-209ENST00000580556 PREX2Q70Z35 1606 aa18.87■□□□□ 0.61
CCDC84-209ENST00000580556 CNTLNQ9NXG0 1405 aa18.87■□□□□ 0.61
CCDC84-209ENST00000580556 NCOA2Q15596 1464 aa18.85■□□□□ 0.61
CCDC84-209ENST00000580556 ZMYM3Q14202 1370 aa18.84■□□□□ 0.61
CCDC84-209ENST00000580556 NPATQ14207 1427 aa18.83■□□□□ 0.61
CCDC84-209ENST00000580556 MROH2AA6NES4 1674 aa18.82■□□□□ 0.6
CCDC84-209ENST00000580556 SAMD9LQ8IVG5 1584 aa18.81■□□□□ 0.6
CCDC84-209ENST00000580556 CDC42BPAQ5VT25 1732 aa18.8■□□□□ 0.6
CCDC84-209ENST00000580556 CLTCQ00610 1675 aaKnown RBP18.8■□□□□ 0.6
CCDC84-209ENST00000580556 MYO3AQ8NEV4 1616 aa18.79■□□□□ 0.6
CCDC84-209ENST00000580556 CCNB3Q8WWL7 1395 aa18.79■□□□□ 0.6
CCDC84-209ENST00000580556 GPATCH8Q9UKJ3 1502 aaKnown RBP18.79■□□□□ 0.6
CCDC84-209ENST00000580556 ZNF777Q9ULD5 760 aaPredicted RBP18.78■□□□□ 0.6
CCDC84-209ENST00000580556 ZNF142P52746 1687 aaPredicted RBP18.77■□□□□ 0.6
CCDC84-209ENST00000580556 HSPA1LP34931 641 aa18.77■□□□□ 0.6
CCDC84-209ENST00000580556 TCOF1Q13428 1488 aaKnown RBP18.77■□□□□ 0.59
CCDC84-209ENST00000580556 CEP170BQ9Y4F5 1589 aaPredicted RBP18.76■□□□□ 0.59
CCDC84-209ENST00000580556 HNRNPMP52272 730 aaKnown RBP eCLIP18.76■□□□□ 0.59
CCDC84-209ENST00000580556 PKD2Q13563 968 aa18.76■□□□□ 0.59
CCDC84-209ENST00000580556 PLA2R1Q13018 1463 aa18.76■□□□□ 0.59
CCDC84-209ENST00000580556 PTPRKQ15262 1439 aa18.75■□□□□ 0.59
CCDC84-209ENST00000580556 MYOM3Q5VTT5 1437 aa18.75■□□□□ 0.59
CCDC84-209ENST00000580556 MED1Q15648 1581 aaPredicted RBP18.75■□□□□ 0.59
CCDC84-209ENST00000580556 SCAF1Q9H7N4 1312 aaKnown RBP18.74■□□□□ 0.59
CCDC84-209ENST00000580556 SYCP2Q9BX26 1530 aa18.74■□□□□ 0.59
CCDC84-209ENST00000580556 PIP4K2BP78356 416 aa18.74■□□□□ 0.59
CCDC84-209ENST00000580556 MIA2Q96PC5 1412 aa18.74■□□□□ 0.59
CCDC84-209ENST00000580556 SPAG9O60271 1321 aaKnown RBP18.74■□□□□ 0.59
CCDC84-209ENST00000580556 PPP6R1Q9UPN7 881 aa18.73■□□□□ 0.59
CCDC84-209ENST00000580556 GGT6Q6P531 493 aa18.72■□□□□ 0.59
CCDC84-209ENST00000580556 ATP7AQ04656 1500 aa18.7■□□□□ 0.58
CCDC84-209ENST00000580556 PLXNC1O60486 1568 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 196.6 ms