RNA–Protein interactions for RNA: ENST00000580299.1

CTC1-207, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS ALT2 TSL 5

Gene CTC1, Length 375 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-207ENST00000580299 KCNH8Q96L42 1107 aa4.48□□□□□ -1.69
CTC1-207ENST00000580299 PTPRKQ15262 1439 aa4.47□□□□□ -1.69
CTC1-207ENST00000580299 CPS1P31327 1500 aa4.47□□□□□ -1.69
CTC1-207ENST00000580299 CAMSAP1Q5T5Y3 1602 aa4.47□□□□□ -1.69
CTC1-207ENST00000580299 POLR1AO95602 1720 aaPredicted RBP4.47□□□□□ -1.69
CTC1-207ENST00000580299 RAPGEF3O95398 923 aa4.47□□□□□ -1.69
CTC1-207ENST00000580299 ZNF142P52746 1687 aaPredicted RBP4.46□□□□□ -1.7
CTC1-207ENST00000580299 DENND4BO75064 1496 aaPredicted RBP4.46□□□□□ -1.7
CTC1-207ENST00000580299 MLECQ14165 292 aa4.46□□□□□ -1.7
CTC1-207ENST00000580299 ZNF335Q9H4Z2 1342 aaPredicted RBP4.46□□□□□ -1.7
CTC1-207ENST00000580299 MAGI2Q86UL8 1455 aa4.45□□□□□ -1.7
CTC1-207ENST00000580299 IFFO2Q5TF58 517 aa4.45□□□□□ -1.7
CTC1-207ENST00000580299 RNF17Q9BXT8 1623 aaKnown RBP4.45□□□□□ -1.7
CTC1-207ENST00000580299 DISP1Q96F81 1524 aa4.44□□□□□ -1.7
CTC1-207ENST00000580299 MROH2AA6NES4 1674 aa4.44□□□□□ -1.7
CTC1-207ENST00000580299 UGGT2Q9NYU1 1516 aa4.43□□□□□ -1.7
CTC1-207ENST00000580299 CTTNBP2Q8WZ74 1663 aa4.43□□□□□ -1.7
CTC1-207ENST00000580299 ABCA8O94911 1581 aa4.43□□□□□ -1.7
CTC1-207ENST00000580299 HECW1Q76N89 1606 aa4.43□□□□□ -1.7
CTC1-207ENST00000580299 MYO3AQ8NEV4 1616 aa4.43□□□□□ -1.7
CTC1-207ENST00000580299 SYNMO15061 1565 aa4.42□□□□□ -1.7
CTC1-207ENST00000580299 FHOD3Q2V2M9 1422 aa4.42□□□□□ -1.7
CTC1-207ENST00000580299 C9orf84Q5VXU9 1444 aa4.42□□□□□ -1.7
CTC1-207ENST00000580299 UPF1Q92900 1129 aaKnown RBP eCLIP4.42□□□□□ -1.7
CTC1-207ENST00000580299 ESF1Q9H501 851 aaKnown RBP4.42□□□□□ -1.7
CTC1-207ENST00000580299 RGS17Q9UGC6 210 aaPredicted RBP4.42□□□□□ -1.7
CTC1-207ENST00000580299 PLA2R1Q13018 1463 aa4.42□□□□□ -1.7
CTC1-207ENST00000580299 SRCAPQ6ZRS2 3230 aa4.41□□□□□ -1.7
CTC1-207ENST00000580299 TRAPPC8Q9Y2L5 1435 aa4.41□□□□□ -1.7
CTC1-207ENST00000580299 CEBPAP49715 358 aaPredicted RBP4.41□□□□□ -1.7
CTC1-207ENST00000580299 POTEAQ6S8J7 498 aa4.41□□□□□ -1.7
CTC1-207ENST00000580299 FAM9AQ8IZU1 332 aaPredicted RBP4.41□□□□□ -1.7
CTC1-207ENST00000580299 RAPGEF6Q8TEU7 1601 aa4.41□□□□□ -1.7
CTC1-207ENST00000580299 PKD2Q13563 968 aa4.4□□□□□ -1.71
CTC1-207ENST00000580299 ATP10AO60312 1499 aa4.4□□□□□ -1.71
CTC1-207ENST00000580299 CEP170BQ9Y4F5 1589 aaPredicted RBP4.4□□□□□ -1.71
CTC1-207ENST00000580299 GOLGA3Q08378 1498 aa4.39□□□□□ -1.71
CTC1-207ENST00000580299 SHANK2Q9UPX8 1470 aa4.39□□□□□ -1.71
CTC1-207ENST00000580299 PPP4R3CPQ6ZMV5 832 aa4.39□□□□□ -1.71
CTC1-207ENST00000580299 LRRC7Q96NW7 1537 aa4.39□□□□□ -1.71
CTC1-207ENST00000580299 NCKAP5LQ9HCH0 1330 aa4.39□□□□□ -1.71
CTC1-207ENST00000580299 KDM5CP41229 1560 aa4.39□□□□□ -1.71
CTC1-207ENST00000580299 LRP5O75197 1615 aa4.39□□□□□ -1.71
CTC1-207ENST00000580299 ALKQ9UM73 1620 aa4.39□□□□□ -1.71
CTC1-207ENST00000580299 NPATQ14207 1427 aa4.38□□□□□ -1.71
CTC1-207ENST00000580299 CNTLNQ9NXG0 1405 aa4.38□□□□□ -1.71
CTC1-207ENST00000580299 TCOF1Q13428 1488 aaKnown RBP4.38□□□□□ -1.71
CTC1-207ENST00000580299 RBM33Q96EV2 1170 aaKnown RBP4.38□□□□□ -1.71
CTC1-207ENST00000580299 ZRANB1Q9UGI0 708 aa4.38□□□□□ -1.71
CTC1-207ENST00000580299 REREQ9P2R6 1566 aa4.38□□□□□ -1.71
CTC1-207ENST00000580299 KIF27Q86VH2 1401 aa4.38□□□□□ -1.71
CTC1-207ENST00000580299 RAPGEF2Q9Y4G8 1499 aa4.37□□□□□ -1.71
CTC1-207ENST00000580299 AGLP35573 1532 aa4.37□□□□□ -1.71
CTC1-207ENST00000580299 CDK13Q14004 1512 aaKnown RBP4.36□□□□□ -1.71
CTC1-207ENST00000580299 PHLPP1O60346 1717 aa4.36□□□□□ -1.71
CTC1-207ENST00000580299 MYO5CQ9NQX4 1742 aa4.36□□□□□ -1.71
CTC1-207ENST00000580299 TRIM52Q96A61 297 aa4.36□□□□□ -1.71
CTC1-207ENST00000580299 CDK12Q9NYV4 1490 aaPredicted RBP4.36□□□□□ -1.71
CTC1-207ENST00000580299 SETBP1Q9Y6X0 1596 aa4.36□□□□□ -1.71
CTC1-207ENST00000580299 CLTCQ00610 1675 aaKnown RBP4.35□□□□□ -1.71
CTC1-207ENST00000580299 MAPK8IP2Q13387 824 aaPredicted RBP4.35□□□□□ -1.71
CTC1-207ENST00000580299 CARMIL1Q5VZK9 1371 aa4.35□□□□□ -1.71
CTC1-207ENST00000580299 VWDEQ8N2E2 1590 aa4.35□□□□□ -1.71
CTC1-207ENST00000580299 DIP2CQ9Y2E4 1556 aa4.35□□□□□ -1.71
CTC1-207ENST00000580299 IQGAP1P46940 1657 aa4.35□□□□□ -1.71
CTC1-207ENST00000580299 ZNF772Q68DY9 489 aaPredicted RBP4.34□□□□□ -1.71
CTC1-207ENST00000580299 IGF1RP08069 1367 aa4.34□□□□□ -1.71
CTC1-207ENST00000580299 NEURL4Q96JN8 1562 aa4.34□□□□□ -1.71
CTC1-207ENST00000580299 ABCA6Q8N139 1617 aa4.34□□□□□ -1.71
CTC1-207ENST00000580299 ITSN2Q9NZM3 1697 aa4.34□□□□□ -1.71
CTC1-207ENST00000580299 ROBO1Q9Y6N7 1651 aa4.34□□□□□ -1.71
CTC1-207ENST00000580299 STRCP1A6NGW2 1772 aa4.34□□□□□ -1.71
CTC1-207ENST00000580299 XIRP1Q702N8 1843 aaKnown RBP4.34□□□□□ -1.71
CTC1-207ENST00000580299 DNMT1P26358 1616 aaKnown RBP4.33□□□□□ -1.72
CTC1-207ENST00000580299 KIF14Q15058 1648 aa4.33□□□□□ -1.72
CTC1-207ENST00000580299 ATP10BO94823 1461 aa4.33□□□□□ -1.72
CTC1-207ENST00000580299 ZNF518AQ6AHZ1 1483 aa4.33□□□□□ -1.72
CTC1-207ENST00000580299 DEPDC5O75140 1603 aa4.32□□□□□ -1.72
CTC1-207ENST00000580299 SCAPERQ9BY12 1400 aa4.32□□□□□ -1.72
CTC1-207ENST00000580299 MEX3CQ5U5Q3 659 aaKnown RBP4.32□□□□□ -1.72
CTC1-207ENST00000580299 MYT1LQ9UL68 1186 aa4.32□□□□□ -1.72
CTC1-207ENST00000580299 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.31□□□□□ -1.72
CTC1-207ENST00000580299 A2ML1A8K2U0 1454 aa4.31□□□□□ -1.72
CTC1-207ENST00000580299 LRRC9Q6ZRR7 1453 aa4.31□□□□□ -1.72
CTC1-207ENST00000580299 ARID3CA6NKF2 412 aa4.31□□□□□ -1.72
CTC1-207ENST00000580299 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP4.31□□□□□ -1.72
CTC1-207ENST00000580299 YY1P25490 414 aa4.31□□□□□ -1.72
CTC1-207ENST00000580299 RXRBP28702 533 aa4.31□□□□□ -1.72
CTC1-207ENST00000580299 HNRNPUL2Q1KMD3 747 aaKnown RBP4.31□□□□□ -1.72
CTC1-207ENST00000580299 CNKSR2Q8WXI2 1034 aa4.31□□□□□ -1.72
CTC1-207ENST00000580299 SHPRHQ149N8 1683 aa4.31□□□□□ -1.72
CTC1-207ENST00000580299 ATAD2Q6PL18 1390 aa4.3□□□□□ -1.72
CTC1-207ENST00000580299 JCADQ9P266 1359 aa4.3□□□□□ -1.72
CTC1-207ENST00000580299 SENP3-EIF4A1A0A087X0R7 540 aa4.3□□□□□ -1.72
CTC1-207ENST00000580299 NHSL1Q5SYE7 1610 aa4.3□□□□□ -1.72
CTC1-207ENST00000580299 FAM135BQ49AJ0 1406 aa4.29□□□□□ -1.72
CTC1-207ENST00000580299 NUTM2BA6NNL0 878 aaPredicted RBP4.29□□□□□ -1.72
CTC1-207ENST00000580299 NUTM2EB1AL46 878 aaPredicted RBP4.29□□□□□ -1.72
CTC1-207ENST00000580299 NUTM2DQ5VT03 806 aaPredicted RBP4.29□□□□□ -1.72
CTC1-207ENST00000580299 NUTM2AQ8IVF1 878 aaPredicted RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms