RNA–Protein interactions for RNA: ENST00000580182.5

PPP4R1-215, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-215ENST00000580182 SCAPERQ9BY12 1400 aa29.64■■■□□ 2.34
PPP4R1-215ENST00000580182 PREX2Q70Z35 1606 aa29.63■■■□□ 2.33
PPP4R1-215ENST00000580182 CDC42BPAQ5VT25 1732 aa29.62■■■□□ 2.33
PPP4R1-215ENST00000580182 KDM4FA0A1W2PPD8 638 aa29.61■■■□□ 2.33
PPP4R1-215ENST00000580182 EHBP1L1Q8N3D4 1523 aa29.6■■■□□ 2.33
PPP4R1-215ENST00000580182 TIAM1Q13009 1591 aa29.6■■■□□ 2.33
PPP4R1-215ENST00000580182 AEBP2Q6ZN18 517 aaPredicted RBP29.58■■■□□ 2.33
PPP4R1-215ENST00000580182 GPATCH8Q9UKJ3 1502 aaKnown RBP29.58■■■□□ 2.33
PPP4R1-215ENST00000580182 POGZQ7Z3K3 1410 aa29.56■■■□□ 2.32
PPP4R1-215ENST00000580182 CCNB3Q8WWL7 1395 aa29.53■■■□□ 2.32
PPP4R1-215ENST00000580182 ZMYM4Q5VZL5 1548 aa29.51■■■□□ 2.32
PPP4R1-215ENST00000580182 ZNF777Q9ULD5 760 aaPredicted RBP29.51■■■□□ 2.31
PPP4R1-215ENST00000580182 ARHGEF12Q9NZN5 1544 aa29.5■■■□□ 2.31
PPP4R1-215ENST00000580182 KANK4Q5T7N3 995 aaPredicted RBP29.49■■■□□ 2.31
PPP4R1-215ENST00000580182 AFAP1Q8N556 730 aa29.49■■■□□ 2.31
PPP4R1-215ENST00000580182 ABCC1P33527 1531 aa29.49■■■□□ 2.31
PPP4R1-215ENST00000580182 LRRC9Q6ZRR7 1453 aa29.48■■■□□ 2.31
PPP4R1-215ENST00000580182 YEATS2Q9ULM3 1422 aa29.47■■■□□ 2.31
PPP4R1-215ENST00000580182 CFDP1Q9UEE9 299 aaPredicted RBP29.47■■■□□ 2.31
PPP4R1-215ENST00000580182 SAMD9LQ8IVG5 1584 aa29.47■■■□□ 2.31
PPP4R1-215ENST00000580182 ARHGEF40Q8TER5 1519 aa29.46■■■□□ 2.31
PPP4R1-215ENST00000580182 NCOA2Q15596 1464 aa29.46■■■□□ 2.31
PPP4R1-215ENST00000580182 MAP3K1Q13233 1512 aa29.45■■■□□ 2.31
PPP4R1-215ENST00000580182 ZNF518AQ6AHZ1 1483 aa29.45■■■□□ 2.31
PPP4R1-215ENST00000580182 SUPT6HQ7KZ85 1726 aaKnown RBP29.45■■■□□ 2.3
PPP4R1-215ENST00000580182 ZFYVE16Q7Z3T8 1539 aa29.45■■■□□ 2.3
PPP4R1-215ENST00000580182 TRAPPC8Q9Y2L5 1435 aa29.45■■■□□ 2.3
PPP4R1-215ENST00000580182 ITSN2Q9NZM3 1697 aa29.44■■■□□ 2.3
PPP4R1-215ENST00000580182 MAGI2Q86UL8 1455 aa29.42■■■□□ 2.3
PPP4R1-215ENST00000580182 KDM5CP41229 1560 aa29.41■■■□□ 2.3
PPP4R1-215ENST00000580182 HNRNPMP52272 730 aaKnown RBP eCLIP29.39■■■□□ 2.34e-6■■■■□ 23.6
PPP4R1-215ENST00000580182 SYCP2Q9BX26 1530 aa29.39■■■□□ 2.3
PPP4R1-215ENST00000580182 ZNF644Q9H582 1327 aaPredicted RBP29.39■■■□□ 2.3
PPP4R1-215ENST00000580182 ARID4BQ4LE39 1312 aaPredicted RBP29.37■■■□□ 2.29
PPP4R1-215ENST00000580182 APLP2Q06481 763 aa29.36■■■□□ 2.29
PPP4R1-215ENST00000580182 SIGLEC1Q9BZZ2 1709 aa29.35■■■□□ 2.29
PPP4R1-215ENST00000580182 MYT1LQ9UL68 1186 aa29.35■■■□□ 2.29
PPP4R1-215ENST00000580182 HECW2Q9P2P5 1572 aa29.33■■■□□ 2.29
PPP4R1-215ENST00000580182 KIAA1107Q9UPP5 1409 aa29.32■■■□□ 2.28
PPP4R1-215ENST00000580182 PLEKHH2Q8IVE3 1493 aa29.31■■■□□ 2.28
PPP4R1-215ENST00000580182 MLH3Q9UHC1 1453 aa29.31■■■□□ 2.28
PPP4R1-215ENST00000580182 ATP10AO60312 1499 aa29.3■■■□□ 2.28
PPP4R1-215ENST00000580182 BCORL1Q5H9F3 1711 aa29.28■■■□□ 2.28
PPP4R1-215ENST00000580182 DIP2CQ9Y2E4 1556 aa29.27■■■□□ 2.28
PPP4R1-215ENST00000580182 C9orf84Q5VXU9 1444 aa29.27■■■□□ 2.28
PPP4R1-215ENST00000580182 ABCA6Q8N139 1617 aa29.27■■■□□ 2.28
PPP4R1-215ENST00000580182 ADAMTSL3P82987 1691 aa29.25■■■□□ 2.27
PPP4R1-215ENST00000580182 KIDINS220Q9ULH0 1771 aa29.25■■■□□ 2.27
PPP4R1-215ENST00000580182 MBD5Q9P267 1494 aa29.24■■■□□ 2.27
PPP4R1-215ENST00000580182 CAMSAP2Q08AD1 1489 aa29.23■■■□□ 2.27
PPP4R1-215ENST00000580182 SPAG9O60271 1321 aaKnown RBP29.22■■■□□ 2.27
PPP4R1-215ENST00000580182 MLECQ14165 292 aa29.2■■■□□ 2.26
PPP4R1-215ENST00000580182 MYOM3Q5VTT5 1437 aa29.2■■■□□ 2.26
PPP4R1-215ENST00000580182 MADDQ8WXG6 1647 aa29.18■■■□□ 2.26
PPP4R1-215ENST00000580182 ATP7AQ04656 1500 aa29.16■■■□□ 2.26
PPP4R1-215ENST00000580182 INO80Q9ULG1 1556 aaPredicted RBP29.16■■■□□ 2.26
PPP4R1-215ENST00000580182 REREQ9P2R6 1566 aa29.14■■■□□ 2.26
PPP4R1-215ENST00000580182 MIA2Q96PC5 1412 aa29.12■■■□□ 2.25
PPP4R1-215ENST00000580182 PTPRMP28827 1452 aa29.11■■■□□ 2.25
PPP4R1-215ENST00000580182 CCDC141Q6ZP82 1450 aa29.11■■■□□ 2.25
PPP4R1-215ENST00000580182 RIMS1Q86UR5 1692 aaKnown RBP29.09■■■□□ 2.25
PPP4R1-215ENST00000580182 ARHGEF5Q12774 1597 aa29.07■■■□□ 2.24
PPP4R1-215ENST00000580182 RSPH4AQ5TD94 716 aa29.07■■■□□ 2.24
PPP4R1-215ENST00000580182 AGLP35573 1532 aa29.06■■■□□ 2.24
PPP4R1-215ENST00000580182 RTEL1-TNFRSF6BF6WH68 1400 aa29.05■■■□□ 2.24
PPP4R1-215ENST00000580182 FER1L4A9Z1Z3 1794 aa29.03■■■□□ 2.24
PPP4R1-215ENST00000580182 A2MP01023 1474 aa29.03■■■□□ 2.24
PPP4R1-215ENST00000580182 PTPN23Q9H3S7 1636 aa29.02■■■□□ 2.24
PPP4R1-215ENST00000580182 FGD6Q6ZV73 1430 aa29.02■■■□□ 2.24
PPP4R1-215ENST00000580182 PLPPR3Q6T4P5 718 aa29.01■■■□□ 2.23
PPP4R1-215ENST00000580182 PPARGC1BQ86YN6 1023 aaKnown RBP29.01■■■□□ 2.23
PPP4R1-215ENST00000580182 PLXNC1O60486 1568 aa29■■■□□ 2.23
PPP4R1-215ENST00000580182 TSPY4P0CV99 314 aa28.99■■■□□ 2.23
PPP4R1-215ENST00000580182 TSPY10P0CW01 314 aa28.99■■■□□ 2.23
PPP4R1-215ENST00000580182 ADGBQ8N7X0 1667 aa28.99■■■□□ 2.23
PPP4R1-215ENST00000580182 TCOF1Q13428 1488 aaKnown RBP28.95■■■□□ 2.22
PPP4R1-215ENST00000580182 DHX29Q7Z478 1369 aaKnown RBP28.93■■■□□ 2.22
PPP4R1-215ENST00000580182 MAST1Q9Y2H9 1570 aa28.92■■■□□ 2.22
PPP4R1-215ENST00000580182 CEBPAP49715 358 aaPredicted RBP28.91■■■□□ 2.22
PPP4R1-215ENST00000580182 ABCC5O15440 1437 aa28.91■■■□□ 2.22
PPP4R1-215ENST00000580182 GGT6Q6P531 493 aa28.88■■■□□ 2.21
PPP4R1-215ENST00000580182 DAPK1P53355 1430 aa28.87■■■□□ 2.21
PPP4R1-215ENST00000580182 ESF1Q9H501 851 aaKnown RBP28.86■■■□□ 2.21
PPP4R1-215ENST00000580182 DNMT1P26358 1616 aaKnown RBP28.86■■■□□ 2.21
PPP4R1-215ENST00000580182 CROCC2H7BZ55 1655 aa28.86■■■□□ 2.21
PPP4R1-215ENST00000580182 FAM50AQ14320 339 aaKnown RBP28.85■■■□□ 2.21
PPP4R1-215ENST00000580182 KIF3BO15066 747 aa28.83■■■□□ 2.21
PPP4R1-215ENST00000580182 SHANK2Q9UPX8 1470 aa28.82■■■□□ 2.2
PPP4R1-215ENST00000580182 CHIC2Q9UKJ5 165 aa28.8■■■□□ 2.2
PPP4R1-215ENST00000580182 C3P01024 1663 aa28.79■■■□□ 2.2
PPP4R1-215ENST00000580182 CNTLNQ9NXG0 1405 aa28.78■■■□□ 2.2
PPP4R1-215ENST00000580182 CLTCQ00610 1675 aaKnown RBP28.77■■■□□ 2.2
PPP4R1-215ENST00000580182 RRP7BPQ9NSQ0 103 aa28.77■■■□□ 2.2
PPP4R1-215ENST00000580182 LMTK3Q96Q04 1460 aa28.75■■■□□ 2.19
PPP4R1-215ENST00000580182 ZMYM3Q14202 1370 aa28.74■■■□□ 2.19
PPP4R1-215ENST00000580182 KIF15Q9NS87 1388 aa28.74■■■□□ 2.19
PPP4R1-215ENST00000580182 MROH2AA6NES4 1674 aa28.73■■■□□ 2.19
PPP4R1-215ENST00000580182 PPP6R1Q9UPN7 881 aa28.72■■■□□ 2.19
PPP4R1-215ENST00000580182 DUOX2Q9NRD8 1548 aa28.72■■■□□ 2.19
PPP4R1-215ENST00000580182 ANKRD30AQ9BXX3 1397 aa28.68■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms