RNA–Protein interactions for RNA: ENST00000579611.1

CDC42EP4-204, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-204ENST00000579611 MYO5CQ9NQX4 1742 aa27.27■■□□□ 1.96
CDC42EP4-204ENST00000579611 ARHGEF40Q8TER5 1519 aa27.24■■□□□ 1.95
CDC42EP4-204ENST00000579611 ARHGAP5Q13017 1502 aa27.22■■□□□ 1.95
CDC42EP4-204ENST00000579611 LOC105371045A0A1W2PR82 267 aa27.19■■□□□ 1.94
CDC42EP4-204ENST00000579611 YEATS2Q9ULM3 1422 aa27.18■■□□□ 1.94
CDC42EP4-204ENST00000579611 ZFYVE16Q7Z3T8 1539 aa27.18■■□□□ 1.94
CDC42EP4-204ENST00000579611 ZNF518AQ6AHZ1 1483 aa27.17■■□□□ 1.94
CDC42EP4-204ENST00000579611 ARID4BQ4LE39 1312 aaPredicted RBP27.16■■□□□ 1.94
CDC42EP4-204ENST00000579611 PREX2Q70Z35 1606 aa27.15■■□□□ 1.94
CDC42EP4-204ENST00000579611 CDC42BPBQ9Y5S2 1711 aa27.13■■□□□ 1.93
CDC42EP4-204ENST00000579611 GPATCH8Q9UKJ3 1502 aaKnown RBP27.13■■□□□ 1.93
CDC42EP4-204ENST00000579611 AFAP1Q8N556 730 aa27.13■■□□□ 1.93
CDC42EP4-204ENST00000579611 ADAMTSL3P82987 1691 aa27.13■■□□□ 1.93
CDC42EP4-204ENST00000579611 MTUS2Q5JR59 1369 aa27.12■■□□□ 1.93
CDC42EP4-204ENST00000579611 KDM5CP41229 1560 aa27.11■■□□□ 1.93
CDC42EP4-204ENST00000579611 ATP10AO60312 1499 aa27.1■■□□□ 1.93
CDC42EP4-204ENST00000579611 BCORL1Q5H9F3 1711 aa27.09■■□□□ 1.93
CDC42EP4-204ENST00000579611 ABCC1P33527 1531 aa27.08■■□□□ 1.93
CDC42EP4-204ENST00000579611 ARHGEF12Q9NZN5 1544 aa27.08■■□□□ 1.93
CDC42EP4-204ENST00000579611 PTPRMP28827 1452 aa27.07■■□□□ 1.92
CDC42EP4-204ENST00000579611 MLH3Q9UHC1 1453 aa27.07■■□□□ 1.92
CDC42EP4-204ENST00000579611 TRAPPC8Q9Y2L5 1435 aa27.06■■□□□ 1.92
CDC42EP4-204ENST00000579611 CDC42BPAQ5VT25 1732 aa27.05■■□□□ 1.92
CDC42EP4-204ENST00000579611 CCNB3Q8WWL7 1395 aa27.05■■□□□ 1.92
CDC42EP4-204ENST00000579611 C9orf84Q5VXU9 1444 aa27.05■■□□□ 1.92
CDC42EP4-204ENST00000579611 VPS8Q8N3P4 1428 aa27.04■■□□□ 1.92
CDC42EP4-204ENST00000579611 EHBP1L1Q8N3D4 1523 aa27.03■■□□□ 1.92
CDC42EP4-204ENST00000579611 CFDP1Q9UEE9 299 aaPredicted RBP27.03■■□□□ 1.92
CDC42EP4-204ENST00000579611 KIAA1107Q9UPP5 1409 aa27.02■■□□□ 1.92
CDC42EP4-204ENST00000579611 ZNF777Q9ULD5 760 aaPredicted RBP26.99■■□□□ 1.91
CDC42EP4-204ENST00000579611 PLEKHH2Q8IVE3 1493 aa26.99■■□□□ 1.91
CDC42EP4-204ENST00000579611 MADDQ8WXG6 1647 aa26.98■■□□□ 1.91
CDC42EP4-204ENST00000579611 HECW2Q9P2P5 1572 aa26.98■■□□□ 1.91
CDC42EP4-204ENST00000579611 SIGLEC1Q9BZZ2 1709 aa26.97■■□□□ 1.91
CDC42EP4-204ENST00000579611 SAMD9LQ8IVG5 1584 aa26.97■■□□□ 1.91
CDC42EP4-204ENST00000579611 REREQ9P2R6 1566 aa26.96■■□□□ 1.91
CDC42EP4-204ENST00000579611 ITSN2Q9NZM3 1697 aa26.95■■□□□ 1.91
CDC42EP4-204ENST00000579611 DIP2CQ9Y2E4 1556 aa26.94■■□□□ 1.9
CDC42EP4-204ENST00000579611 HNRNPMP52272 730 aaKnown RBP eCLIP26.93■■□□□ 1.9
CDC42EP4-204ENST00000579611 MYT1LQ9UL68 1186 aa26.93■■□□□ 1.9
CDC42EP4-204ENST00000579611 TIAM1Q13009 1591 aa26.92■■□□□ 1.9
CDC42EP4-204ENST00000579611 SYCP2Q9BX26 1530 aa26.91■■□□□ 1.9
CDC42EP4-204ENST00000579611 MAP3K1Q13233 1512 aa26.9■■□□□ 1.9
CDC42EP4-204ENST00000579611 MLECQ14165 292 aa26.9■■□□□ 1.9
CDC42EP4-204ENST00000579611 AGLP35573 1532 aa26.89■■□□□ 1.89
CDC42EP4-204ENST00000579611 SPAG9O60271 1321 aaKnown RBP26.89■■□□□ 1.89
CDC42EP4-204ENST00000579611 NCOA2Q15596 1464 aa26.88■■□□□ 1.89
CDC42EP4-204ENST00000579611 ABCA6Q8N139 1617 aa26.87■■□□□ 1.89
CDC42EP4-204ENST00000579611 LRRC9Q6ZRR7 1453 aa26.87■■□□□ 1.89
CDC42EP4-204ENST00000579611 KIDINS220Q9ULH0 1771 aa26.86■■□□□ 1.89
CDC42EP4-204ENST00000579611 ZNF644Q9H582 1327 aaPredicted RBP26.86■■□□□ 1.89
CDC42EP4-204ENST00000579611 MBD5Q9P267 1494 aa26.85■■□□□ 1.89
CDC42EP4-204ENST00000579611 RIMS1Q86UR5 1692 aaKnown RBP26.85■■□□□ 1.89
CDC42EP4-204ENST00000579611 SUPT6HQ7KZ85 1726 aaKnown RBP26.82■■□□□ 1.88
CDC42EP4-204ENST00000579611 KANK4Q5T7N3 995 aaPredicted RBP26.79■■□□□ 1.88
CDC42EP4-204ENST00000579611 RSPH4AQ5TD94 716 aa26.79■■□□□ 1.88
CDC42EP4-204ENST00000579611 ATP7AQ04656 1500 aa26.78■■□□□ 1.88
CDC42EP4-204ENST00000579611 RTEL1-TNFRSF6BF6WH68 1400 aa26.77■■□□□ 1.88
CDC42EP4-204ENST00000579611 FER1L4A9Z1Z3 1794 aa26.76■■□□□ 1.88
CDC42EP4-204ENST00000579611 INO80Q9ULG1 1556 aaPredicted RBP26.76■■□□□ 1.87
CDC42EP4-204ENST00000579611 LMTK3Q96Q04 1460 aa26.76■■□□□ 1.87
CDC42EP4-204ENST00000579611 A2MP01023 1474 aa26.72■■□□□ 1.87
CDC42EP4-204ENST00000579611 CAMSAP2Q08AD1 1489 aa26.72■■□□□ 1.87
CDC42EP4-204ENST00000579611 CCDC141Q6ZP82 1450 aa26.7■■□□□ 1.87
CDC42EP4-204ENST00000579611 PLXNC1O60486 1568 aa26.7■■□□□ 1.86
CDC42EP4-204ENST00000579611 CEBPAP49715 358 aaPredicted RBP26.69■■□□□ 1.86
CDC42EP4-204ENST00000579611 CNTLNQ9NXG0 1405 aa26.69■■□□□ 1.86
CDC42EP4-204ENST00000579611 MIA2Q96PC5 1412 aa26.68■■□□□ 1.86
CDC42EP4-204ENST00000579611 APLP2Q06481 763 aa26.68■■□□□ 1.86
CDC42EP4-204ENST00000579611 PLPPR3Q6T4P5 718 aa26.67■■□□□ 1.86
CDC42EP4-204ENST00000579611 ESF1Q9H501 851 aaKnown RBP26.67■■□□□ 1.86
CDC42EP4-204ENST00000579611 MYOM3Q5VTT5 1437 aa26.65■■□□□ 1.86
CDC42EP4-204ENST00000579611 PPP6R1Q9UPN7 881 aa26.65■■□□□ 1.86
CDC42EP4-204ENST00000579611 ARHGEF5Q12774 1597 aa26.64■■□□□ 1.86
CDC42EP4-204ENST00000579611 DHX29Q7Z478 1369 aaKnown RBP26.64■■□□□ 1.86
CDC42EP4-204ENST00000579611 TSPY4P0CV99 314 aa26.61■■□□□ 1.85
CDC42EP4-204ENST00000579611 TSPY10P0CW01 314 aa26.61■■□□□ 1.85
CDC42EP4-204ENST00000579611 HSPA2P54652 639 aa26.59■■□□□ 1.85
CDC42EP4-204ENST00000579611 ADGBQ8N7X0 1667 aa26.59■■□□□ 1.85
CDC42EP4-204ENST00000579611 ZMYM3Q14202 1370 aa26.57■■□□□ 1.84
CDC42EP4-204ENST00000579611 SETD1BQ9UPS6 1966 aaKnown RBP26.56■■□□□ 1.84
CDC42EP4-204ENST00000579611 GGT6Q6P531 493 aa26.55■■□□□ 1.84
CDC42EP4-204ENST00000579611 NPATQ14207 1427 aa26.53■■□□□ 1.84
CDC42EP4-204ENST00000579611 UHRF1BP1Q6BDS2 1440 aa26.53■■□□□ 1.84
CDC42EP4-204ENST00000579611 C3P01024 1663 aa26.53■■□□□ 1.84
CDC42EP4-204ENST00000579611 PREX1Q8TCU6 1659 aa26.52■■□□□ 1.84
CDC42EP4-204ENST00000579611 MROH2AA6NES4 1674 aa26.5■■□□□ 1.83
CDC42EP4-204ENST00000579611 MAST1Q9Y2H9 1570 aa26.5■■□□□ 1.83
CDC42EP4-204ENST00000579611 KIF3BO15066 747 aa26.48■■□□□ 1.83
CDC42EP4-204ENST00000579611 FGD6Q6ZV73 1430 aa26.45■■□□□ 1.82
CDC42EP4-204ENST00000579611 FAM135AQ9P2D6 1515 aa26.44■■□□□ 1.82
CDC42EP4-204ENST00000579611 TCOF1Q13428 1488 aaKnown RBP26.43■■□□□ 1.82
CDC42EP4-204ENST00000579611 PTPRKQ15262 1439 aa26.43■■□□□ 1.82
CDC42EP4-204ENST00000579611 ABCC5O15440 1437 aa26.41■■□□□ 1.82
CDC42EP4-204ENST00000579611 SHANK2Q9UPX8 1470 aa26.41■■□□□ 1.82
CDC42EP4-204ENST00000579611 CLTCQ00610 1675 aaKnown RBP26.4■■□□□ 1.82
CDC42EP4-204ENST00000579611 PTPN23Q9H3S7 1636 aa26.39■■□□□ 1.82
CDC42EP4-204ENST00000579611 DMRT2Q9Y5R5 561 aa26.38■■□□□ 1.81
CDC42EP4-204ENST00000579611 WASHC2CQ9Y4E1 1318 aa26.37■■□□□ 1.81
CDC42EP4-204ENST00000579611 ILDR1Q86SU0 546 aaPredicted RBP26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms