RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 SCAPERQ9BY12 1400 aa22.5■■□□□ 1.19
CDK5RAP3-213ENST00000579605 HECW1Q76N89 1606 aa22.49■■□□□ 1.19
CDK5RAP3-213ENST00000579605 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.48■■□□□ 1.19
CDK5RAP3-213ENST00000579605 UHRF1BP1Q6BDS2 1440 aa22.48■■□□□ 1.19
CDK5RAP3-213ENST00000579605 CFAP74Q9C0B2 1584 aa22.47■■□□□ 1.19
CDK5RAP3-213ENST00000579605 ATP10AO60312 1499 aa22.47■■□□□ 1.19
CDK5RAP3-213ENST00000579605 SAMD9Q5K651 1589 aa22.46■■□□□ 1.19
CDK5RAP3-213ENST00000579605 PREX1Q8TCU6 1659 aa22.46■■□□□ 1.19
CDK5RAP3-213ENST00000579605 MYT1LQ9UL68 1186 aa22.46■■□□□ 1.19
CDK5RAP3-213ENST00000579605 ARHGEF12Q9NZN5 1544 aa22.46■■□□□ 1.19
CDK5RAP3-213ENST00000579605 STRCQ7RTU9 1775 aa22.45■■□□□ 1.19
CDK5RAP3-213ENST00000579605 C9orf84Q5VXU9 1444 aa22.42■■□□□ 1.18
CDK5RAP3-213ENST00000579605 PTPRTO14522 1441 aa22.41■■□□□ 1.18
CDK5RAP3-213ENST00000579605 CSRNP3Q8WYN3 585 aa22.39■■□□□ 1.17
CDK5RAP3-213ENST00000579605 EFCAB2Q5VUJ9 269 aa22.38■■□□□ 1.17
CDK5RAP3-213ENST00000579605 PLCH2O75038 1416 aa22.37■■□□□ 1.17
CDK5RAP3-213ENST00000579605 AFAP1Q8N556 730 aa22.36■■□□□ 1.17
CDK5RAP3-213ENST00000579605 ESF1Q9H501 851 aaKnown RBP22.36■■□□□ 1.17
CDK5RAP3-213ENST00000579605 ATP1B4Q9UN42 357 aaPredicted RBP22.36■■□□□ 1.17
CDK5RAP3-213ENST00000579605 UBAP1LF5GYI3 381 aa22.35■■□□□ 1.17
CDK5RAP3-213ENST00000579605 LTBP4Q8N2S1 1624 aa22.34■■□□□ 1.17
CDK5RAP3-213ENST00000579605 CDK13Q14004 1512 aaKnown RBP22.3■■□□□ 1.16
CDK5RAP3-213ENST00000579605 IQSEC2Q5JU85 1478 aa22.27■■□□□ 1.16
CDK5RAP3-213ENST00000579605 NCKAP5LQ9HCH0 1330 aa22.26■■□□□ 1.15
CDK5RAP3-213ENST00000579605 TRAPPC8Q9Y2L5 1435 aa22.25■■□□□ 1.15
CDK5RAP3-213ENST00000579605 ZNF335Q9H4Z2 1342 aaPredicted RBP22.25■■□□□ 1.15
CDK5RAP3-213ENST00000579605 SETD1BQ9UPS6 1966 aaKnown RBP22.25■■□□□ 1.15
CDK5RAP3-213ENST00000579605 NCOA1Q15788 1441 aa22.24■■□□□ 1.15
CDK5RAP3-213ENST00000579605 ZNF518AQ6AHZ1 1483 aa22.23■■□□□ 1.15
CDK5RAP3-213ENST00000579605 SCAF1Q9H7N4 1312 aaKnown RBP22.2■■□□□ 1.14
CDK5RAP3-213ENST00000579605 C3P01024 1663 aa22.2■■□□□ 1.14
CDK5RAP3-213ENST00000579605 CDK11AQ9UQ88 783 aaPredicted RBP22.18■■□□□ 1.14
CDK5RAP3-213ENST00000579605 ARHGAP5Q13017 1502 aa22.16■■□□□ 1.14
CDK5RAP3-213ENST00000579605 DIP2CQ9Y2E4 1556 aa22.16■■□□□ 1.14
CDK5RAP3-213ENST00000579605 PIP4K2BP78356 416 aa22.15■■□□□ 1.14
CDK5RAP3-213ENST00000579605 CAMSAP1Q5T5Y3 1602 aa22.15■■□□□ 1.14
CDK5RAP3-213ENST00000579605 HSPA1LP34931 641 aa22.14■■□□□ 1.13
CDK5RAP3-213ENST00000579605 EHMT2Q96KQ7 1210 aa22.13■■□□□ 1.13
CDK5RAP3-213ENST00000579605 KDM5CP41229 1560 aa22.12■■□□□ 1.13
CDK5RAP3-213ENST00000579605 MYO5CQ9NQX4 1742 aa22.12■■□□□ 1.13
CDK5RAP3-213ENST00000579605 CNTLNQ9NXG0 1405 aa22.09■■□□□ 1.13
CDK5RAP3-213ENST00000579605 KIF14Q15058 1648 aa22.09■■□□□ 1.13
CDK5RAP3-213ENST00000579605 ABCA6Q8N139 1617 aa22.09■■□□□ 1.13
CDK5RAP3-213ENST00000579605 MLH3Q9UHC1 1453 aa22.09■■□□□ 1.13
CDK5RAP3-213ENST00000579605 ZMYM3Q14202 1370 aa22.08■■□□□ 1.12
CDK5RAP3-213ENST00000579605 REREQ9P2R6 1566 aa22.08■■□□□ 1.12
CDK5RAP3-213ENST00000579605 PKD2Q13563 968 aa22.07■■□□□ 1.12
CDK5RAP3-213ENST00000579605 PHF23Q9BUL5 403 aaPredicted RBP22.07■■□□□ 1.12
CDK5RAP3-213ENST00000579605 AGLP35573 1532 aa22.06■■□□□ 1.12
CDK5RAP3-213ENST00000579605 PPP6R1Q9UPN7 881 aa22.05■■□□□ 1.12
CDK5RAP3-213ENST00000579605 TROQ12816 1431 aaPredicted RBP22.05■■□□□ 1.12
CDK5RAP3-213ENST00000579605 CLIP1P30622 1438 aa22.03■■□□□ 1.12
CDK5RAP3-213ENST00000579605 NPATQ14207 1427 aa22.03■■□□□ 1.12
CDK5RAP3-213ENST00000579605 MED1Q15648 1581 aaPredicted RBP22.03■■□□□ 1.12
CDK5RAP3-213ENST00000579605 TOM1O60784 492 aa22.02■■□□□ 1.12
CDK5RAP3-213ENST00000579605 FMN1Q68DA7 1419 aa22■■□□□ 1.11
CDK5RAP3-213ENST00000579605 SENP3Q9H4L4 574 aaPredicted RBP22■■□□□ 1.11
CDK5RAP3-213ENST00000579605 UBTFP17480 764 aaKnown RBP21.99■■□□□ 1.11
CDK5RAP3-213ENST00000579605 ZNF777Q9ULD5 760 aaPredicted RBP21.99■■□□□ 1.11
CDK5RAP3-213ENST00000579605 EEA1Q15075 1411 aa21.98■■□□□ 1.11
CDK5RAP3-213ENST00000579605 GGT6Q6P531 493 aa21.96■■□□□ 1.11
CDK5RAP3-213ENST00000579605 PLA2R1Q13018 1463 aa21.94■■□□□ 1.1
CDK5RAP3-213ENST00000579605 SPAG9O60271 1321 aaKnown RBP21.93■■□□□ 1.1
CDK5RAP3-213ENST00000579605 ABCC1P33527 1531 aa21.93■■□□□ 1.1
CDK5RAP3-213ENST00000579605 TCOF1Q13428 1488 aaKnown RBP21.93■■□□□ 1.1
CDK5RAP3-213ENST00000579605 KIDINS220Q9ULH0 1771 aa21.92■■□□□ 1.1
CDK5RAP3-213ENST00000579605 CDC42BPBQ9Y5S2 1711 aa21.92■■□□□ 1.1
CDK5RAP3-213ENST00000579605 HNRNPMP52272 730 aaKnown RBP eCLIP21.91■■□□□ 1.1
CDK5RAP3-213ENST00000579605 PTPRKQ15262 1439 aa21.89■■□□□ 1.1
CDK5RAP3-213ENST00000579605 CEP170BQ9Y4F5 1589 aaPredicted RBP21.89■■□□□ 1.09
CDK5RAP3-213ENST00000579605 ARHGAP35Q9NRY4 1499 aa21.89■■□□□ 1.09
CDK5RAP3-213ENST00000579605 MROH2AA6NES4 1674 aa21.88■■□□□ 1.09
CDK5RAP3-213ENST00000579605 ITSN2Q9NZM3 1697 aa21.87■■□□□ 1.09
CDK5RAP3-213ENST00000579605 MYO3AQ8NEV4 1616 aa21.87■■□□□ 1.09
CDK5RAP3-213ENST00000579605 CLTCQ00610 1675 aaKnown RBP21.85■■□□□ 1.09
CDK5RAP3-213ENST00000579605 SUPT6HQ7KZ85 1726 aaKnown RBP21.85■■□□□ 1.09
CDK5RAP3-213ENST00000579605 PREX2Q70Z35 1606 aa21.84■■□□□ 1.09
CDK5RAP3-213ENST00000579605 SAMD9LQ8IVG5 1584 aa21.84■■□□□ 1.09
CDK5RAP3-213ENST00000579605 SHANK2Q9UPX8 1470 aa21.83■■□□□ 1.08
CDK5RAP3-213ENST00000579605 ZNF142P52746 1687 aaPredicted RBP21.82■■□□□ 1.08
CDK5RAP3-213ENST00000579605 CPS1P31327 1500 aa21.8■■□□□ 1.08
CDK5RAP3-213ENST00000579605 A2ML1A8K2U0 1454 aa21.79■■□□□ 1.08
CDK5RAP3-213ENST00000579605 A2MP01023 1474 aa21.79■■□□□ 1.08
CDK5RAP3-213ENST00000579605 FBXO31Q5XUX0 539 aaPredicted RBP21.79■■□□□ 1.08
CDK5RAP3-213ENST00000579605 SYCP2Q9BX26 1530 aa21.77■■□□□ 1.08
CDK5RAP3-213ENST00000579605 ANKLE2Q86XL3 938 aa21.77■■□□□ 1.08
CDK5RAP3-213ENST00000579605 LRRIQ1Q96JM4 1722 aa21.76■■□□□ 1.07
CDK5RAP3-213ENST00000579605 DNMT1P26358 1616 aaKnown RBP21.75■■□□□ 1.07
CDK5RAP3-213ENST00000579605 RGS17Q9UGC6 210 aaPredicted RBP21.74■■□□□ 1.07
CDK5RAP3-213ENST00000579605 ATP7AQ04656 1500 aa21.74■■□□□ 1.07
CDK5RAP3-213ENST00000579605 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.74■■□□□ 1.07
CDK5RAP3-213ENST00000579605 CFDP1Q9UEE9 299 aaPredicted RBP21.73■■□□□ 1.07
CDK5RAP3-213ENST00000579605 TNRQ92752 1358 aa21.73■■□□□ 1.07
CDK5RAP3-213ENST00000579605 CDC42BPAQ5VT25 1732 aa21.71■■□□□ 1.07
CDK5RAP3-213ENST00000579605 NEURL4Q96JN8 1562 aa21.7■■□□□ 1.06
CDK5RAP3-213ENST00000579605 THEMISQ8N1K5 641 aaPredicted RBP21.7■■□□□ 1.06
CDK5RAP3-213ENST00000579605 CCDC18Q5T9S5 1454 aa21.7■■□□□ 1.06
CDK5RAP3-213ENST00000579605 GPATCH8Q9UKJ3 1502 aaKnown RBP21.7■■□□□ 1.06
CDK5RAP3-213ENST00000579605 PLXNC1O60486 1568 aa21.69■■□□□ 1.06
CDK5RAP3-213ENST00000579605 ALKQ9UM73 1620 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms