RNA–Protein interactions for RNA: ENST00000578502.1

ERBB2-207, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5

Gene ERBB2, Length 497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-207ENST00000578502 SCAPERQ9BY12 1400 aa16.84■□□□□ 0.29
ERBB2-207ENST00000578502 CDC42BPAQ5VT25 1732 aa16.83■□□□□ 0.28
ERBB2-207ENST00000578502 PREX2Q70Z35 1606 aa16.81■□□□□ 0.28
ERBB2-207ENST00000578502 VPS8Q8N3P4 1428 aa16.81■□□□□ 0.28
ERBB2-207ENST00000578502 MTUS2Q5JR59 1369 aa16.8■□□□□ 0.28
ERBB2-207ENST00000578502 POGZQ7Z3K3 1410 aa16.79■□□□□ 0.28
ERBB2-207ENST00000578502 ARHGEF12Q9NZN5 1544 aa16.78■□□□□ 0.28
ERBB2-207ENST00000578502 GPATCH8Q9UKJ3 1502 aaKnown RBP16.78■□□□□ 0.28
ERBB2-207ENST00000578502 YEATS2Q9ULM3 1422 aa16.78■□□□□ 0.28
ERBB2-207ENST00000578502 AFAP1Q8N556 730 aa16.77■□□□□ 0.28
ERBB2-207ENST00000578502 ZNF777Q9ULD5 760 aaPredicted RBP16.77■□□□□ 0.28
ERBB2-207ENST00000578502 TIAM1Q13009 1591 aa16.76■□□□□ 0.27
ERBB2-207ENST00000578502 SIGLEC1Q9BZZ2 1709 aa16.76■□□□□ 0.27
ERBB2-207ENST00000578502 ZMYM4Q5VZL5 1548 aa16.75■□□□□ 0.27
ERBB2-207ENST00000578502 EHBP1L1Q8N3D4 1523 aa16.75■□□□□ 0.27
ERBB2-207ENST00000578502 ARHGEF40Q8TER5 1519 aa16.75■□□□□ 0.27
ERBB2-207ENST00000578502 ABCC1P33527 1531 aa16.74■□□□□ 0.27
ERBB2-207ENST00000578502 ZFYVE16Q7Z3T8 1539 aa16.74■□□□□ 0.27
ERBB2-207ENST00000578502 CCNB3Q8WWL7 1395 aa16.74■□□□□ 0.27
ERBB2-207ENST00000578502 SAMD9LQ8IVG5 1584 aa16.73■□□□□ 0.27
ERBB2-207ENST00000578502 TRAPPC8Q9Y2L5 1435 aa16.73■□□□□ 0.27
ERBB2-207ENST00000578502 ITSN2Q9NZM3 1697 aa16.72■□□□□ 0.27
ERBB2-207ENST00000578502 KANK4Q5T7N3 995 aaPredicted RBP16.72■□□□□ 0.27
ERBB2-207ENST00000578502 ARID4BQ4LE39 1312 aaPredicted RBP16.71■□□□□ 0.27
ERBB2-207ENST00000578502 ZNF644Q9H582 1327 aaPredicted RBP16.7■□□□□ 0.26
ERBB2-207ENST00000578502 HNRNPMP52272 730 aaKnown RBP eCLIP16.7■□□□□ 0.26
ERBB2-207ENST00000578502 CFDP1Q9UEE9 299 aaPredicted RBP16.7■□□□□ 0.26
ERBB2-207ENST00000578502 KDM5CP41229 1560 aa16.69■□□□□ 0.26
ERBB2-207ENST00000578502 NCOA2Q15596 1464 aa16.69■□□□□ 0.26
ERBB2-207ENST00000578502 ZNF518AQ6AHZ1 1483 aa16.69■□□□□ 0.26
ERBB2-207ENST00000578502 LRRC9Q6ZRR7 1453 aa16.69■□□□□ 0.26
ERBB2-207ENST00000578502 SYCP2Q9BX26 1530 aa16.69■□□□□ 0.26
ERBB2-207ENST00000578502 MAGI2Q86UL8 1455 aa16.68■□□□□ 0.26
ERBB2-207ENST00000578502 SUPT6HQ7KZ85 1726 aaKnown RBP16.67■□□□□ 0.26
ERBB2-207ENST00000578502 MYT1LQ9UL68 1186 aa16.67■□□□□ 0.26
ERBB2-207ENST00000578502 BCORL1Q5H9F3 1711 aa16.67■□□□□ 0.26
ERBB2-207ENST00000578502 ADAMTSL3P82987 1691 aa16.66■□□□□ 0.26
ERBB2-207ENST00000578502 HECW2Q9P2P5 1572 aa16.65■□□□□ 0.26
ERBB2-207ENST00000578502 MLECQ14165 292 aa16.65■□□□□ 0.26
ERBB2-207ENST00000578502 ATP10AO60312 1499 aa16.65■□□□□ 0.26
ERBB2-207ENST00000578502 DIP2CQ9Y2E4 1556 aa16.64■□□□□ 0.25
ERBB2-207ENST00000578502 ABCA6Q8N139 1617 aa16.64■□□□□ 0.25
ERBB2-207ENST00000578502 MADDQ8WXG6 1647 aa16.64■□□□□ 0.25
ERBB2-207ENST00000578502 MAP3K1Q13233 1512 aa16.63■□□□□ 0.25
ERBB2-207ENST00000578502 MLH3Q9UHC1 1453 aa16.62■□□□□ 0.25
ERBB2-207ENST00000578502 KIDINS220Q9ULH0 1771 aa16.62■□□□□ 0.25
ERBB2-207ENST00000578502 C9orf84Q5VXU9 1444 aa16.62■□□□□ 0.25
ERBB2-207ENST00000578502 KIAA1107Q9UPP5 1409 aa16.61■□□□□ 0.25
ERBB2-207ENST00000578502 MBD5Q9P267 1494 aa16.6■□□□□ 0.25
ERBB2-207ENST00000578502 RIMS1Q86UR5 1692 aaKnown RBP16.59■□□□□ 0.25
ERBB2-207ENST00000578502 SPAG9O60271 1321 aaKnown RBP16.59■□□□□ 0.25
ERBB2-207ENST00000578502 PTPRMP28827 1452 aa16.59■□□□□ 0.25
ERBB2-207ENST00000578502 PLEKHH2Q8IVE3 1493 aa16.59■□□□□ 0.25
ERBB2-207ENST00000578502 CAMSAP2Q08AD1 1489 aa16.58■□□□□ 0.24
ERBB2-207ENST00000578502 APLP2Q06481 763 aa16.57■□□□□ 0.24
ERBB2-207ENST00000578502 PLPPR3Q6T4P5 718 aa16.57■□□□□ 0.24
ERBB2-207ENST00000578502 INO80Q9ULG1 1556 aaPredicted RBP16.55■□□□□ 0.24
ERBB2-207ENST00000578502 ATP7AQ04656 1500 aa16.55■□□□□ 0.24
ERBB2-207ENST00000578502 REREQ9P2R6 1566 aa16.53■□□□□ 0.24
ERBB2-207ENST00000578502 FER1L4A9Z1Z3 1794 aa16.53■□□□□ 0.24
ERBB2-207ENST00000578502 MYOM3Q5VTT5 1437 aa16.53■□□□□ 0.24
ERBB2-207ENST00000578502 CCDC141Q6ZP82 1450 aa16.49■□□□□ 0.23
ERBB2-207ENST00000578502 CEBPAP49715 358 aaPredicted RBP16.49■□□□□ 0.23
ERBB2-207ENST00000578502 AGLP35573 1532 aa16.49■□□□□ 0.23
ERBB2-207ENST00000578502 A2MP01023 1474 aa16.48■□□□□ 0.23
ERBB2-207ENST00000578502 ARHGEF5Q12774 1597 aa16.47■□□□□ 0.23
ERBB2-207ENST00000578502 PPARGC1BQ86YN6 1023 aaKnown RBP16.47■□□□□ 0.23
ERBB2-207ENST00000578502 PLXNC1O60486 1568 aa16.47■□□□□ 0.23
ERBB2-207ENST00000578502 MIA2Q96PC5 1412 aa16.46■□□□□ 0.23
ERBB2-207ENST00000578502 ADGBQ8N7X0 1667 aa16.46■□□□□ 0.23
ERBB2-207ENST00000578502 RTEL1-TNFRSF6BF6WH68 1400 aa16.45■□□□□ 0.22
ERBB2-207ENST00000578502 PTPN23Q9H3S7 1636 aa16.44■□□□□ 0.22
ERBB2-207ENST00000578502 FGD6Q6ZV73 1430 aa16.43■□□□□ 0.22
ERBB2-207ENST00000578502 RSPH4AQ5TD94 716 aa16.42■□□□□ 0.22
ERBB2-207ENST00000578502 TSPY4P0CV99 314 aa16.41■□□□□ 0.22
ERBB2-207ENST00000578502 TSPY10P0CW01 314 aa16.41■□□□□ 0.22
ERBB2-207ENST00000578502 GGT6Q6P531 493 aa16.41■□□□□ 0.22
ERBB2-207ENST00000578502 DHX29Q7Z478 1369 aaKnown RBP16.4■□□□□ 0.22
ERBB2-207ENST00000578502 C3P01024 1663 aa16.4■□□□□ 0.22
ERBB2-207ENST00000578502 ABCC5O15440 1437 aa16.39■□□□□ 0.21
ERBB2-207ENST00000578502 TCOF1Q13428 1488 aaKnown RBP16.39■□□□□ 0.21
ERBB2-207ENST00000578502 LMTK3Q96Q04 1460 aa16.39■□□□□ 0.21
ERBB2-207ENST00000578502 MAST1Q9Y2H9 1570 aa16.38■□□□□ 0.21
ERBB2-207ENST00000578502 CLTCQ00610 1675 aaKnown RBP16.38■□□□□ 0.21
ERBB2-207ENST00000578502 HSPA2P54652 639 aa16.37■□□□□ 0.21
ERBB2-207ENST00000578502 ESF1Q9H501 851 aaKnown RBP16.37■□□□□ 0.21
ERBB2-207ENST00000578502 KIF3BO15066 747 aa16.36■□□□□ 0.21
ERBB2-207ENST00000578502 CROCC2H7BZ55 1655 aa16.36■□□□□ 0.21
ERBB2-207ENST00000578502 CHIC2Q9UKJ5 165 aa16.35■□□□□ 0.21
ERBB2-207ENST00000578502 DAPK1P53355 1430 aa16.35■□□□□ 0.21
ERBB2-207ENST00000578502 DNMT1P26358 1616 aaKnown RBP16.34■□□□□ 0.21
ERBB2-207ENST00000578502 FAM50AQ14320 339 aaKnown RBP16.34■□□□□ 0.21
ERBB2-207ENST00000578502 ZMYM3Q14202 1370 aa16.33■□□□□ 0.2
ERBB2-207ENST00000578502 RRP7BPQ9NSQ0 103 aa16.32■□□□□ 0.2
ERBB2-207ENST00000578502 CNTLNQ9NXG0 1405 aa16.32■□□□□ 0.2
ERBB2-207ENST00000578502 MROH2AA6NES4 1674 aa16.31■□□□□ 0.2
ERBB2-207ENST00000578502 PREX1Q8TCU6 1659 aa16.3■□□□□ 0.2
ERBB2-207ENST00000578502 SHANK2Q9UPX8 1470 aa16.3■□□□□ 0.2
ERBB2-207ENST00000578502 KIF15Q9NS87 1388 aa16.29■□□□□ 0.2
ERBB2-207ENST00000578502 PTPRKQ15262 1439 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms